prot_C-australica_Contig_989.7.2 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_989.7.2
Unique Name	prot_C-australica_Contig_989.7.2
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	496

Homology

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_989.7.2 vs. uniprot

BLAST of mRNA_C-australica_Contig_989.7.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 332..446 e-value: 1.7E-32 score: 114.3 coord: 249..331 e-value: 1.7E-20 score: 75.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 81..243 e-value: 1.5E-19 score: 72.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 175..226 e-value: 8.4E-7 score: 29.0 coord: 237..295 e-value: 4.4E-12 score: 45.9 coord: 306..363 e-value: 1.3E-5 score: 25.1 coord: 374..429 e-value: 5.7E-13 score: 48.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 354..384 e-value: 3.7E-7 score: 27.9 coord: 387..420 e-value: 6.2E-10 score: 36.6 coord: 286..318 e-value: 5.0E-4 score: 18.1 coord: 215..247 e-value: 3.1E-8 score: 31.3 coord: 250..283 e-value: 3.0E-4 score: 18.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 385..419 score: 11.608074
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 213..247 score: 12.408249
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 283..317 score: 9.339086
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 248..282 score: 11.060009
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 350..384 score: 11.947875
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..56
None	No IPR available	PANTHER	PTHR47939	MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE	coord: 155..451 coord: 95..347

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_989	contig	C-australica_Contig_989:15034..17576 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_989.7.2	mRNA_C-australica_Contig_989.7.2	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_989 14924..17598 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_989.7.2 ID=prot_C-australica_Contig_989.7.2|Name=mRNA_C-australica_Contig_989.7.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=496bp
MFLISRSKAYARSLVWRSLARAFTTPQLEQSRAGSDQSSLSSHAAYPAST
TGPLDPQERTGLKRGRGASRPALGWTNSRDQRPKWRAQRDLMREIQRLGK
ARRWREVIPMMIRAQERGLELNISVYNAAIAVMNRNNQWREAYKLTAVMH
PDSKKRATTAIHILEALQAHGSPCLQPDLHTYSCLITLSGIAWKLPHALE
LLAMLKESELQPSQVIYNSLIRACGETNSPDMALEFFHEMLQEGIRPCKV
TYGSLLHAYGRQGGAAKAQQLFDGMQQHGLSPNMVHYNSLIMAYGVADLA
SKAVAVYHDLVATGFVPSSHTYTNLLHACSAPSGSWELAVQFFNEIDKPT
LTHYNALIDACGKDGQIELAHKKLKEMKRKGVQPCVVSYSAVIACYVKAG
CMKEAKEVLKDMQADGISPNYVTYNTLMEPVVAACDWKEARRMYLELLSF
GEWTHWSSVKYDYLDLHHCNKGLALAAVRYVLKEMLREGQWLSLT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat