mRNA_C-australica_Contig_10254.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10254.1.1 vs. uniprot
Match: A0A7Y4Y8D9_9BACT (Type IX secretion system membrane protein PorP/SprF n=1 Tax=Ferruginibacter sp. TaxID=1940288 RepID=A0A7Y4Y8D9_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 2.850e-5
Identity = 46/147 (31.29%), Postives = 72/147 (48.98%), Query Frame = 1

Query:    1 FGAVYRLKDLSVGASINQFPIRAVLN----NVSSIER--LYRIESQVSYAFNFSENW--------TFRPMVRYLAISNFQSIDGLIKAEFKDQFWASAYYGSSNLSGLSAGAQLGKNWSVGYGFNFYLSRL-NASVYRNSHEIMLRY 396
            FG  Y  K+L++GAS++Q  +++ LN    N+++ E   LYR      Y F+   NW        T   +V YL  +      G  + E    FW    Y S     LSAG  + K +++GYG++ Y+S + N     + HE++LRY
Sbjct:  155 FGIAYNRKNLTIGASVSQL-VQSKLNFYSGNLTTNEEAMLYR-----HYYFHGQYNWKVDEVTVITPNALVIYLPNAPVSYQVGA-RMEHNKTFWWGLGYRSHQSFMLSAGLHINKKFTLGYGYDDYISPISNFDNGASGHEVLLRY 294

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BLAST of mRNA_C-australica_Contig_10254.1.1 vs. uniprot
Match: A0A7D3XF64_9BACT (Type IX secretion system membrane protein PorP/SprF n=1 Tax=Tenuifilum thalassicum TaxID=2590900 RepID=A0A7D3XF64_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 5.470e-5
Identity = 33/109 (30.28%), Postives = 54/109 (49.54%), Query Frame = 1

Query:   73 LNNVSSIERLYRIESQVSYAFNFSENWTFRPMVRYLAISNFQ-SIDGLIKAEFKDQFWASAYYGSSNLSGLSAGAQLGKNWSVGYGFNFYLSRLNASVYRNSHEIMLRY 396
            + N   ++R Y I +   Y +  +  W F+P     A+     S D   +  ++D  W  A Y   + +G+    ++    +VGYG++F LSRLN S  R +HEIML +
Sbjct:  191 ITNSDQLKRHYYIIA--GYVWQLNSEWLFKPSFIAKAVGGAPLSTDITAQFLYRDFIWVGAMYRLGDAAGIFFNFKISNQLTVGYGYDFSLSRLN-SYNRGTHEIMLSF 296

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BLAST of mRNA_C-australica_Contig_10254.1.1 vs. uniprot
Match: A0A1F3VVC5_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium RIFCSPHIGHO2_02_FULL_44_7 TaxID=1797361 RepID=A0A1F3VVC5_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 7.540e-5
Identity = 27/77 (35.06%), Postives = 47/77 (61.04%), Query Frame = 1

Query:  166 MVRYLAISNFQSIDGLIKAEFKDQFWASAYYGSSNLSGLSAGAQLGKNWSVGYGFNFYLSRLNASVYRNSHEIMLRY 396
            +VRY      Q I G++K  +  ++W    Y SS+  G+SAG ++   ++VGYG+++ +SRL ++    SHE+ML +
Sbjct:  207 LVRYTKPIPLQVI-GMLKGTYDGKYWLGFLYRSSDAIGISAGVKIKDRFTVGYGYDYTISRL-SNYQSGSHEVMLSF 281

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10254.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10254.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A7Y4Y8D9_9BACT	2.850e-5	31.29	Type IX secretion system membrane protein PorP/Spr...	[more]
A0A7D3XF64_9BACT	5.470e-5	30.28	Type IX secretion system membrane protein PorP/Spr...	[more]
A0A1F3VVC5_9BACT	7.540e-5	35.06	Uncharacterized protein n=1 Tax=Bacteroidetes bact...	[more]

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682586762.567941-CDS-C-australica_Contig_10254:315..723	1682586762.567941-CDS-C-australica_Contig_10254:315..723	Chrysoparadoxa australica CS_1217	CDS	C-australica_Contig_10254 316..723 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_10254.1.1	prot_C-australica_Contig_10254.1.1	Chrysoparadoxa australica CS_1217	polypeptide	C-australica_Contig_10254 316..723 -