mRNA_C-australica_Contig_1022.6.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1022.6.1

>prot_C-australica_Contig_1022.6.1 ID=prot_C-australica_Contig_1022.6.1|Name=mRNA_C-australica_Contig_1022.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=529bp
MRAPPQCVLLGLFLAQGLALTPEEVDEVEETTEPVAVPPPPINIYFGEPY
TGEPFPIPGVVQAEMFNVGPEAYFNFDLGLEGFVSEFRAGSPVEITAVGL
SLEEQKEAAERAEEEEIVVAAAPDLPENYKIDYIVPGEFLSYEVLITEPG
DYSAIISTSAVAPQKPFDISLKLNDDRCGVEENTLVRFQRRIREIHTADP
NVFIDHTETFTLPEDGVRGEATITVCFNDVENITFDKFELVLESEPGATF
APTLAPPPYTCMQDALLPGVKPGSCLQVLCFPDRIAFDEPFHATVTWCLD
RARPAALSFDTLDNIEKFFISYGEGGSTKTFYDDEEEAYQCGINTFEITL
PADLTIDNPEFSGDVMYKYFITPIFYGDDEKDTPQLLQDPFPNMLAEAGW
NLLPDQYGALEGDCPVVDFELWNLTEPEPYDAIDIEIPECHENGKDLDIT
FDVELNTIEESEITCNLMGGQGVDVYLSEEEIFVAQAYMNVEGSGRYTIT
IPGELTEGAEIVENPYVSCWLGKPGMSS*
back to top

mRNA from alignment at C-australica_Contig_1022:6234..10343-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1022.6.1 ID=mRNA_C-australica_Contig_1022.6.1|Name=mRNA_C-australica_Contig_1022.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4110bp|location=Sequence derived from alignment at C-australica_Contig_1022:6234..10343- (Chrysoparadoxa australica CS_1217)
TCAAGGAGCAGTGACCCGTGACCATCACTCTTCACACCACAACATTTTAC
ACTGCGTGGAAGGTAAAGGGGTTGCTTTTAACTTTCTTGCGTTTTTGTCT
CCTACGCTAAAAGGAACATTCCTGGTCTCCGTTTGACCCCCCAAAAATTC
CTCCTCGGGACAGGTCAGCAAAATGTTCTTCATATCAACCATAGGCAAAC
AGGGTGGTTGGAATCATTATTAGACCGTCTCCACACCCCGTCTTCACCTA
CAGCCGTCTACAGTTCAGAGGATGCGAGCCCCTCCTCAATGTGTGTTGCT
AGGCCTATTCCTCGCGCAGGGCTTGGCCTTGACGCCGGAAGAGGTCGATG
AGGTGGAGGAGACAACCGAGGTATTACAGCTGGAGCTGAGCTGCATTATC
CCTCTTCCTCTGTGTGTGTGTCTCTGTCTCTCCCTCCCGTGACCAGTACC
TTGCAAAGCGCGAGAACCCCGAACCGATCTTACCCATGGACGTCTCACGC
GCTCTGTGGGCTAAATTCTTCTCCCTGAAGCCCTTGCACCTTGCACCCTT
TTCTCATCCTTCACTCATCCCCTCTCCGTGGGACCCATCGACCTCCTCAC
CTCGACACCAGCTAAGCAGTTATTAAGCCACTTTAACCCGAACCGCCGAG
ACCTCTGAGGACGGTGCCTCCTCCCTGCCAACCCCACAGCTCTAGCACTA
ACCCTCTCTCCCCCCTCCCTCCCTTGTTTGATAGCCCGTTGCAGTGCCTC
CACCCCCTATCAACATCTACTTCGGAGAGCCTTACACTGGAGAGCCATTC
CCCATACCTGGCGTTGTGCAGGCCGAGATGTTTAACGTTGGACCTGAGGT
GATGAGCATCTTTCGTGGACTCCCCAGCCGTTCCTGGTCCACTTGCTAAC
TGCACCTCGCTATTCCATCTCTGACCCCACAGGCATATTTCAATTTTGAC
TTGGGACTTGAAGGCTTTGTGAGCGAATTCCGTGCAGGCTCACCAGTAGA
AATCACAGCCGTCGGGTTGTCTCTTGAAGAGCAGAAGGAAGCAGCAGAGA
GGGCTGAAGAGGAGGAGATTGTGGTTGCAGCAGCCCCTGACCTTCCCGAG
AACTACAAGGTAATAACAGCTGCCTTCAGCTTTGGTCAATGCATTCCAGC
TTAGCAGCTTCTTCTCTGTGTGTCTCTCTCTGCGCCTGCCTGTGTCAGCA
AGAGAGCAAGACGCGAAAAGCTTGCTTTATCTAAACGGTCTCTCGTCTCC
TCCATCACTTCATTAGATTGACTACATCGTGCCGGGAGAGTTCCTGAGCT
ACGAGGTCCTAATCACTGAGCCGGGTGACTACTCAGCCATCATCAGCACT
TCAGCTGTTGCGCCGCAGAAGCCCTTTGACATCAGCCTCAAGCTGAATGA
TGATAGGTGCGGGGTTGAGGAGAACACCCTTGGTAAGGAAGAGACCTACT
GCACTCACACCAGTCACTTGCACCACCAGTCAATCACTAGTAGAAGCACC
CAGTTCCCTAACCAGCTTTCACCTCCATTTCAGTTCGCTTCCAAAGGCGC
ATCAGGGAGATACACACAGCCGACCCCAACGTCTTTATTGATCACACTGA
AACGTTCACATTGCCAGGTAGATGCTGATGCTGATCCTGACTGAGCTGAT
TGCCAGCCATTCTCCTCAAGCCTTTGAGCCTCGTAACAGGAGAAAACCCA
TGAGCGTGTGCAGAATAATCCTTTTCCCTCGTATCGGGCTGGACTAAGCT
AAACTAACACGATTTGATTTCCTCAGAGGATGGAGTCAGGGGGGAAGCAA
CCATCACTGTCTGTTTCAACGACGTGGAGAATATTACCTTTGACAAGTTT
GAGCTGGTGCTTGAGAGCGAGCCTGGGGCCACCTTCGCGCCCACGCTGGC
CCCACCACCTTACACATGCATGCAAGGTATGAATAAAGCATAACCTAATT
GTGATGAGAACTAATTCGCAATTGGCGTGCATGCCTACTTAACTGCTTTC
TTCTTTCCTTTCTTTGCTTTCCTCTTCACAGATGCGCTGCTCCCTGGTGT
CAAGCCTGGAAGCTGTCTCCAGGTGCACCCCTGCCATGCCTGCCGGCATC
TGCTCTTTAGGAAGAGTCAGACCTCTCATGTTACTCTCCCGTGCAACATT
ACAGGTGCTGTGCTTCCCTGACAGGATAGCATTCGATGAGCCATTCCATG
CTACTGTCACATGGTGCCTTGACAGGGCAAGACCTGCTGCTCTCAGGTAG
TAACTAAATGCCTATTACAGCTAGTGTCTTGAAGGTTAGGGCCAGGTTAC
TGCAGCCTAATGCTTTGAGATCAACTAAGCACTGCCGCGCTGTCTCTCTC
TCTCTCTCTCTCTCTCCCAAACTTTTATTAGCTTTGACACCCTTGACAAC
ATTGAGAAGTTCTTCATCAGCTATGGCGAGGGTGGTTCAACGAAAACATT
TTACGATGATGGTGAGGAAGCCTCTGCCGCTGCATCAGTACAGCACCCTT
GCCAGTCATCTTGCTTCTCTGGCTCATCCTCATTGTGCCCTTCCTTCCTT
TTCTTCCCCACACCCTTCAGAGGAAGAGGCCTACCAGTGCGGTATCAACA
CATTTGAAATAACGCTGCCTGCGGACTTGACCATTGACAACCCCGAGTTC
AGTGGGGATGTTATGTACAAGTATTTCATTACCCCCATCTTCTACGGGGA
TGACGAAAAGGTTAGGCACCATCAAAGGCAGCCACTTGTTCGGCAGCTTA
CTCATTCATTGCATTAACCTCGGGGACAATTGCTGACTTGTACCAACACT
CGCTCACGCTCACTTCCATGGTTTTATCCATAGGACACACCTCAGCTGCT
TCAAGATCCATTCCCTAACATGCTTGGTGAGTTGTAGCCTTCTCATCCTC
CTCACATTCTTTTCTTCACCCTTGCTGCTGCTGCTATTCTTGCAATCCTC
CCTTTTGCTTCACTTCACCTTGAACTCCTCAAACTAACTCCCTTCTCATC
ATTCTAGCCGAGGCTGGCTGGAACTTGTTGCCAGACCAGTATGGAGCTTT
GGAGGGTGACTGCCCTGTTGTGGACTTTGAGCTCTGGAACCTGACTGAGT
AAGTTGCCTGAGCGCTATTCAGCACAGAATGCATCACAACTTACCCATTC
ATGCCTTCCGGTCCATTTTCCCTCCCCTTTTCCCTACTCAGGCCTGAACC
ATATGATGCCATTGACATTGAGATCCCTGAGTGCCATGAGAACGGCAAGG
ACCTTGACATCACTTTTGGTAAGTCAGCTAGAGAGCTTGCATATCTTCTA
TATTGCTTGCGTCTCACACCTCACACCTCTGCCAGACGTCGAGCTCAACA
CCATTGAGGAGAGCGAAATCACTTGCAACCTAATGGGCGGCCAGGGTGTG
GATGTATACCTGAGCGAAGAAGAAATTTTTGTGGCGCAGGTGAGAGCGCC
CCCTGCCTCTCTTCTCTAACTCTTTGTCACAGTGTCAGCTAAGCTTCTGG
TGAATTGCCAACGTGATAGAGACGGTTGCTTGACCAACTATTATTACGTA
ACACTTCCTTGTTCGCCTGCCATCACAAAATACACAGCCCGCATGCTAAC
TCCAAGCATTTACACCACTAGAAGGCGGGATCTTAATACTTATTTTGTAC
CGTACTGCCCCCATTCAGGCCTACATGAATGTTGAAGGCAGCGGTCGGTA
TACCATCACTATCCCTGGGGAACTCACTGAAGGGGCTGAGATTGTAGAGA
ACCCCTACGTCAGCTGCTGGCTAGGAAAGCCAGGTATGAGCTCTTAAACG
AGCCACGCACAACTCATATCATGCCTTCTGCACCAACGCCTTTTATATGT
GTAGTGCCATGAGCCCTTCTCTCACGTGACCTGCCCTGCCTCCCAAACTT
CCAACAGACTCATACGGCGTCTGGGAGCCTGGACTGAACACTGAGTACTT
CTTGGTGAGTGGGTACCTCCTCCTACTAACACTAGCCTACTACTAGATTA
CTACTAGATTCTTCACTCACATTCTCGTCCTCTTGTCATCACCTCAGAGC
ATGGACTACTGTGGGGAGGGAGGGTATGCTGGTTTCGACTAAAGTGACCA
GTGACCCCGT
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_1022:6234..10343-

>mRNA_C-australica_Contig_1022.6.1 ID=mRNA_C-australica_Contig_1022.6.1|Name=mRNA_C-australica_Contig_1022.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1587bp|location=Sequence derived from alignment at C-australica_Contig_1022:6234..10343- (Chrysoparadoxa australica CS_1217)
ATGCGAGCCCCTCCTCAATGTGTGTTGCTAGGCCTATTCCTCGCGCAGGG
CTTGGCCTTGACGCCGGAAGAGGTCGATGAGGTGGAGGAGACAACCGAGC
CCGTTGCAGTGCCTCCACCCCCTATCAACATCTACTTCGGAGAGCCTTAC
ACTGGAGAGCCATTCCCCATACCTGGCGTTGTGCAGGCCGAGATGTTTAA
CGTTGGACCTGAGGCATATTTCAATTTTGACTTGGGACTTGAAGGCTTTG
TGAGCGAATTCCGTGCAGGCTCACCAGTAGAAATCACAGCCGTCGGGTTG
TCTCTTGAAGAGCAGAAGGAAGCAGCAGAGAGGGCTGAAGAGGAGGAGAT
TGTGGTTGCAGCAGCCCCTGACCTTCCCGAGAACTACAAGATTGACTACA
TCGTGCCGGGAGAGTTCCTGAGCTACGAGGTCCTAATCACTGAGCCGGGT
GACTACTCAGCCATCATCAGCACTTCAGCTGTTGCGCCGCAGAAGCCCTT
TGACATCAGCCTCAAGCTGAATGATGATAGGTGCGGGGTTGAGGAGAACA
CCCTTGTTCGCTTCCAAAGGCGCATCAGGGAGATACACACAGCCGACCCC
AACGTCTTTATTGATCACACTGAAACGTTCACATTGCCAGAGGATGGAGT
CAGGGGGGAAGCAACCATCACTGTCTGTTTCAACGACGTGGAGAATATTA
CCTTTGACAAGTTTGAGCTGGTGCTTGAGAGCGAGCCTGGGGCCACCTTC
GCGCCCACGCTGGCCCCACCACCTTACACATGCATGCAAGATGCGCTGCT
CCCTGGTGTCAAGCCTGGAAGCTGTCTCCAGGTGCTGTGCTTCCCTGACA
GGATAGCATTCGATGAGCCATTCCATGCTACTGTCACATGGTGCCTTGAC
AGGGCAAGACCTGCTGCTCTCAGCTTTGACACCCTTGACAACATTGAGAA
GTTCTTCATCAGCTATGGCGAGGGTGGTTCAACGAAAACATTTTACGATG
ATGAGGAAGAGGCCTACCAGTGCGGTATCAACACATTTGAAATAACGCTG
CCTGCGGACTTGACCATTGACAACCCCGAGTTCAGTGGGGATGTTATGTA
CAAGTATTTCATTACCCCCATCTTCTACGGGGATGACGAAAAGGACACAC
CTCAGCTGCTTCAAGATCCATTCCCTAACATGCTTGCCGAGGCTGGCTGG
AACTTGTTGCCAGACCAGTATGGAGCTTTGGAGGGTGACTGCCCTGTTGT
GGACTTTGAGCTCTGGAACCTGACTGAGCCTGAACCATATGATGCCATTG
ACATTGAGATCCCTGAGTGCCATGAGAACGGCAAGGACCTTGACATCACT
TTTGACGTCGAGCTCAACACCATTGAGGAGAGCGAAATCACTTGCAACCT
AATGGGCGGCCAGGGTGTGGATGTATACCTGAGCGAAGAAGAAATTTTTG
TGGCGCAGGCCTACATGAATGTTGAAGGCAGCGGTCGGTATACCATCACT
ATCCCTGGGGAACTCACTGAAGGGGCTGAGATTGTAGAGAACCCCTACGT
CAGCTGCTGGCTAGGAAAGCCAGGTATGAGCTCTTAA
back to top