prot_C-australica_Contig_1022.6.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_1022.6.1
Unique Name	prot_C-australica_Contig_1022.6.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	529

Homology

[Close]

BLAST of mRNA_C-australica_Contig_1022.6.1 vs. uniprot
Match: A0A835Z2T5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.600e-26
Identity = 91/274 (33.21%), Postives = 130/274 (47.45%), Query Frame = 0

Query:  261 CMQDALLPGVKPGSCLQVLCFPDRIAFDEPFHATVTWCLDRARPAALSFDTLDNIEKFFISYGEGGSTKTFYDDEEEAYQCGINTFEITLPADLTIDNPEFSGDVMYKYFITPIFYGDDEKDTPQLLQDPFPNMLAEAGWNLLPDQYGALEGDCPVVDFELWNLTEPEPYDAIDIEI-PECHENGKDLDITFDVELNTIEESEITCNLMGGQGVDVYLSEEEIFVAQAY-----MNVEGS-GRYTITIPGELTEGAEIVENPYVSCWLGKPGMS 527
            C Q    PGVKPGSC QV+C P  IA   PFH  V WCL R R + L  DTLD   K +  YG  G T       E  +QCG +TFE T+ A       E++  V+++YF+TP+ +GD   D  +  ++P+PN +A  G +  P  Y  L  DC +    L N       D ID    P C + G+   +     L +   +++  NL  G G D YL  ++IFVA++       +V+    R+     G  T        PY++ +L   G +
Sbjct:   48 CKQPTPPPGVKPGSCFQVVCLPTSIAIGAPFHTRVRWCLQRPRRSHLVVDTLDVNTKEW--YGGDGYTP------EGEWQCGEHTFEQTMNAVPDPATGEYN--VLWRYFVTPV-WGDGRYDIRE--EEPYPNAIAATGIDRQP-LYDGLVDDCGLRPDRLVNFPPTGVQDGIDFPYTPYCIQPGEPFFVAVFTHLLSAPAADLHVNLHIGTGPDKYLGPDDIFVAESVEFGIPRDVDAIWSRHLARFTGRATAMLVGYSTPYLTAFLVPAGST 307

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_1022.6.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_1022.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A835Z2T5_9STRA	1.600e-26	33.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..115
None	No IPR available	GENE3D	2.60.120.260		coord: 46..241 e-value: 6.6E-7 score: 31.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_1022	contig	C-australica_Contig_1022:6547..10072 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_1022.6.1	mRNA_C-australica_Contig_1022.6.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_1022 6234..10343 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_1022.6.1 ID=prot_C-australica_Contig_1022.6.1|Name=mRNA_C-australica_Contig_1022.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=529bp
MRAPPQCVLLGLFLAQGLALTPEEVDEVEETTEPVAVPPPPINIYFGEPY
TGEPFPIPGVVQAEMFNVGPEAYFNFDLGLEGFVSEFRAGSPVEITAVGL
SLEEQKEAAERAEEEEIVVAAAPDLPENYKIDYIVPGEFLSYEVLITEPG
DYSAIISTSAVAPQKPFDISLKLNDDRCGVEENTLVRFQRRIREIHTADP
NVFIDHTETFTLPEDGVRGEATITVCFNDVENITFDKFELVLESEPGATF
APTLAPPPYTCMQDALLPGVKPGSCLQVLCFPDRIAFDEPFHATVTWCLD
RARPAALSFDTLDNIEKFFISYGEGGSTKTFYDDEEEAYQCGINTFEITL
PADLTIDNPEFSGDVMYKYFITPIFYGDDEKDTPQLLQDPFPNMLAEAGW
NLLPDQYGALEGDCPVVDFELWNLTEPEPYDAIDIEIPECHENGKDLDIT
FDVELNTIEESEITCNLMGGQGVDVYLSEEEIFVAQAYMNVEGSGRYTIT
IPGELTEGAEIVENPYVSCWLGKPGMSS*