Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1127 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 885 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586754.2072027-UTR-C-australica_Contig_102:14680..14879 | 1682586754.2072027-UTR-C-australica_Contig_102:14680..14879 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_102 14681..14879 + |
| 1682586754.2176778-UTR-C-australica_Contig_102:14961..14968 | 1682586754.2176778-UTR-C-australica_Contig_102:14961..14968 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_102 14962..14968 + |
| 1682586754.2515113-UTR-C-australica_Contig_102:15949..15985 | 1682586754.2515113-UTR-C-australica_Contig_102:15949..15985 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_102 15950..15985 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586754.2277076-CDS-C-australica_Contig_102:14968..15166 | 1682586754.2277076-CDS-C-australica_Contig_102:14968..15166 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_102 14969..15166 + |
| 1682586754.2394583-CDS-C-australica_Contig_102:15262..15949 | 1682586754.2394583-CDS-C-australica_Contig_102:15262..15949 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_102 15263..15949 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_102.6.1 >prot_C-australica_Contig_102.6.1 ID=prot_C-australica_Contig_102.6.1|Name=mRNA_C-australica_Contig_102.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=295bp
MNLPAQPRPQEGPLGCSTLLRQVFGYIGRGQSCFLRVNAQWNDIYVQLFG
AKTTYDAAVASVARVEVAAAEGCPLTIKLFSKAAESGNIGVCMKLKSLSC
PCSDLTCYAAATGGHLKLLRWLREGPDPCPWRLTTCMAAARGGHMELLQW
LRAGADPCPWSVDSCLAAAEGGHLEILQWLRGGTCPCPWYEDVCLIAARG
GHLEMLKWLREGPDPCPWNEDTCEAAANGGHLEVLKWLREGPDVCPWNGW
CCPAWTAREHPDHFSCNFDYGEDSEQFTSIVNWVHANGHPCDCS* back to topmRNA from alignment at C-australica_Contig_102:14681..15985+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_102.6.1 ID=mRNA_C-australica_Contig_102.6.1|Name=mRNA_C-australica_Contig_102.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1305bp|location=Sequence derived from alignment at C-australica_Contig_102:14681..15985+ (Chrysoparadoxa australica CS_1217)
GTAGCTGCTTGCTTTGCCTTTTGCCTTTCGCCCAGCTATTGCCTCGAGGA
AGTAAGCTTCGTTTCTTTATCGACAAGCTTGCCCTAAAACTCGACAAGGT
TGCGCTATCTCCTGAAGAGGGCCCTTTCTATTCCGTGAGACCAGTCCGTA
GGACAAGAGCTCGTCATCATAGCCCTCAACTTCCCTTCAAACTTCCAAGG
TAATGCCCTCCTGGCCTTTCTTTATAAACCCCCTCTGAGCCCTCCCTAAA
CTCCCTCCTCTGCCCCTTTTAATTGCCACAGCATCCTCATGAATCTTCCA
GCGCAGCCACGACCACAGGAAGGGCCACTGGGGTGCAGCACCTTGCTGAG
GCAAGTGTTTGGATACATAGGAAGGGGACAAAGTTGCTTCCTGAGGGTCA
ATGCCCAGTGGAATGACATCTATGTGCAGCTCTTCGGTGCCAAGACTACC
TATGATGCAGCAGTGGCATCAGTAGCACGTGTTGAGGTGAGCTGGTAGCA
GCAAGACTGTGCTTGATGAATTAACCATGCACCTCATGCATATCATCTGT
CTTTTAACCCTAGTCTCTTGCCTAATCCTCAGGTAGCTGCTGCTGAAGGG
TGTCCCCTGACAATAAAGCTCTTCTCCAAGGCAGCTGAGAGTGGCAATAT
AGGGGTTTGCATGAAGCTTAAGAGCTTGAGCTGCCCTTGCTCTGACTTGA
CATGTTATGCAGCTGCTACTGGAGGGCATTTAAAGCTACTTCGATGGCTA
AGGGAAGGTCCAGACCCTTGCCCTTGGCGCCTGACAACCTGTATGGCAGC
TGCACGGGGAGGGCACATGGAGCTACTTCAGTGGCTAAGGGCAGGTGCAG
ACCCATGCCCTTGGTCTGTAGACAGCTGCCTAGCAGCTGCTGAAGGAGGC
CACCTGGAGATACTTCAGTGGCTAAGGGGTGGTACATGTCCTTGCCCTTG
GTATGAGGACGTTTGTTTAATAGCTGCCAGAGGGGGGCACCTGGAGATGC
TGAAATGGCTAAGGGAAGGCCCAGATCCATGCCCTTGGAATGAAGACACC
TGTGAAGCAGCTGCTAATGGAGGGCACCTGGAGGTACTTAAATGGCTAAG
GGAAGGCCCAGATGTGTGCCCTTGGAATGGGTGGTGCTGCCCTGCTTGGA
CAGCCAGGGAGCATCCTGATCATTTTTCTTGCAATTTTGATTATGGCGAA
GATTCAGAGCAGTTCACCTCTATAGTGAACTGGGTCCATGCAAATGGGCA
CCCATGTGATTGCTCTTAAGTTGGTAATGAAATGAAAGCTGGTAAATTTC
ACCTA back to topCoding sequence (CDS) from alignment at C-australica_Contig_102:14681..15985+ >mRNA_C-australica_Contig_102.6.1 ID=mRNA_C-australica_Contig_102.6.1|Name=mRNA_C-australica_Contig_102.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=885bp|location=Sequence derived from alignment at C-australica_Contig_102:14681..15985+ (Chrysoparadoxa australica CS_1217)
ATGAATCTTCCAGCGCAGCCACGACCACAGGAAGGGCCACTGGGGTGCAG
CACCTTGCTGAGGCAAGTGTTTGGATACATAGGAAGGGGACAAAGTTGCT
TCCTGAGGGTCAATGCCCAGTGGAATGACATCTATGTGCAGCTCTTCGGT
GCCAAGACTACCTATGATGCAGCAGTGGCATCAGTAGCACGTGTTGAGGT
AGCTGCTGCTGAAGGGTGTCCCCTGACAATAAAGCTCTTCTCCAAGGCAG
CTGAGAGTGGCAATATAGGGGTTTGCATGAAGCTTAAGAGCTTGAGCTGC
CCTTGCTCTGACTTGACATGTTATGCAGCTGCTACTGGAGGGCATTTAAA
GCTACTTCGATGGCTAAGGGAAGGTCCAGACCCTTGCCCTTGGCGCCTGA
CAACCTGTATGGCAGCTGCACGGGGAGGGCACATGGAGCTACTTCAGTGG
CTAAGGGCAGGTGCAGACCCATGCCCTTGGTCTGTAGACAGCTGCCTAGC
AGCTGCTGAAGGAGGCCACCTGGAGATACTTCAGTGGCTAAGGGGTGGTA
CATGTCCTTGCCCTTGGTATGAGGACGTTTGTTTAATAGCTGCCAGAGGG
GGGCACCTGGAGATGCTGAAATGGCTAAGGGAAGGCCCAGATCCATGCCC
TTGGAATGAAGACACCTGTGAAGCAGCTGCTAATGGAGGGCACCTGGAGG
TACTTAAATGGCTAAGGGAAGGCCCAGATGTGTGCCCTTGGAATGGGTGG
TGCTGCCCTGCTTGGACAGCCAGGGAGCATCCTGATCATTTTTCTTGCAA
TTTTGATTATGGCGAAGATTCAGAGCAGTTCACCTCTATAGTGAACTGGG
TCCATGCAAATGGGCACCCATGTGATTGCTCTTAA back to top
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