prot_C-australica_Contig_102.6.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_102.6.1
Unique Nameprot_C-australica_Contig_102.6.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length295
Homology
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BLAST of mRNA_C-australica_Contig_102.6.1 vs. uniprot
Match: A0A835YN60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN60_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.790e-5
Identity = 33/74 (44.59%), Postives = 40/74 (54.05%), Query Frame = 0 
Query:   53 TTYDAAVASVARVEVAAAEGCPLTIKLFSKAAESGNIGVCMKLKSLSCPCSD---LTCYAAATGGHLKLLRWLR 123
            T +D A+ASV   + A A GCP T KL   AA  G + V     +  C       L C AAA GGHL++LRWLR
Sbjct:  328 TFFDVAIASVPLAQWALANGCPKTEKLLELAARRGALDVLQHFVTNGCTWHSEPWLVCAAAAGGGHLEVLRWLR 401
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_102.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YN60_9STRA5.790e-544.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 194..286
e-value: 2.6E-5
score: 25.6
coord: 69..185
e-value: 2.7E-7
score: 32.1
NoneNo IPR availablePANTHERPTHR12393:SF6SUBFAMILY NOT NAMEDcoord: 61..181
NoneNo IPR availablePANTHERPTHR12393:SF6SUBFAMILY NOT NAMEDcoord: 185..242
coord: 165..240
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 165..250
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 72..157
IPR038772Sphingomyelin phosphodiesterase 2-likePANTHERPTHR12393SPHINGOMYELIN PHOSPHODIESTERASE RELATEDcoord: 185..242
coord: 165..240
coord: 61..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_102contigC-australica_Contig_102:14969..15949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_102.6.1mRNA_C-australica_Contig_102.6.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_102 14681..15985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_102.6.1 ID=prot_C-australica_Contig_102.6.1|Name=mRNA_C-australica_Contig_102.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=295bp
MNLPAQPRPQEGPLGCSTLLRQVFGYIGRGQSCFLRVNAQWNDIYVQLFG
AKTTYDAAVASVARVEVAAAEGCPLTIKLFSKAAESGNIGVCMKLKSLSC
PCSDLTCYAAATGGHLKLLRWLREGPDPCPWRLTTCMAAARGGHMELLQW
LRAGADPCPWSVDSCLAAAEGGHLEILQWLRGGTCPCPWYEDVCLIAARG
GHLEMLKWLREGPDPCPWNEDTCEAAANGGHLEVLKWLREGPDVCPWNGW
CCPAWTAREHPDHFSCNFDYGEDSEQFTSIVNWVHANGHPCDCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR038772SMPD2-like