mRNA_C-tenellus_contig10793.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: D8LLY7_ECTSI (FeS assembly protein SufD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY7_ECTSI) HSP 1 Score: 230 bits (587), Expect = 7.820e-63 Identity = 134/286 (46.85%), Postives = 177/286 (61.89%), Query Frame = 2 Query: 254 ARTGWLGRSGTG-------------GAV---LAETSEPETTASE----VMSERRDPKEWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLA--TGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGADV 1045 AR+ GR G G GAV L ET + + +E V RRDP+ WFD +R A PRP++L ELS A E +L E+ LP RKQEP+RYT+LE ++RT+F + + A T A+ S GQQ+VFVNG+ + ELSD S L G+EGLVA H+G + + Q +E+L++LPE DAD RT QG+L FASLNQACF+D VIMV GV VEKP+QV+F S+G GP++SHPRL+V AG S + + +S+ G L N RV+V + A V Sbjct: 63 ARSAQAGRQGDGVLSATGVATEDNQGAVAGSLLETQQKGVSNNEMKPFVRVPRRDPRMWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEEGPTVSHPRLVVKAGADSHVTLTQSYLSRGGVCLANGFTRVLVGDRATV 348
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A6H5JB34_9PHAE (SufBD_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB34_9PHAE) HSP 1 Score: 226 bits (575), Expect = 1.880e-59 Identity = 128/270 (47.41%), Postives = 172/270 (63.70%), Query Frame = 2 Query: 260 TGWLGRSGTGGAV--LAETSEPETTASE----VMSERRDPKEWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLA--TGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGADV 1045 TG + G AV L ET + + +E V RRDP+ WFD +R A PRP++L ELS A E +L E+ LP RKQEP+RYT+LE ++RT+F + + A T A+ S GQQ+VFVNG+ + ELSD S L G+EGLVA H+G + + Q +E+L++LPE DAD RT QG+L FASLNQACF+D VI+V GV VEKP+QV+F S+G P++SHPRL+V AG S + + +S+ G L N RV+V + A V Sbjct: 241 TGVVTEDNQGAAVGSLLETQQKGVSNNEMNPFVRVPRRDPRVWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFKSAALTTAAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGTPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIIVADGVTVEKPIQVIFFSEGEEVPTVSHPRLVVKAGADSHMTLTQSYLSRGGVCLANGFTRVLVGDRATV 510
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A836CQZ7_9STRA (SufBD_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQZ7_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.350e-44 Identity = 109/245 (44.49%), Postives = 154/245 (62.86%), Query Frame = 2 Query: 326 TASEVMSERRDPKEWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGL-VATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVS------DGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGA 1039 T + +R DP+ WF ++ QA P EL+SA L+E+ LP+RKQEP+RYT+LE +FR ++ A AG + E ++ S S GQQLVFVNG N +LSDTS + EG+ V + LG + EH V +L HLPEV A+ T QG+LPFA+LNQACF+D A +++ P V VE+P+QVLFV+ +G G +I HPRL + AG+GS + +S+ G G+ + N + R +V +GA Sbjct: 3 TGVNLAPKRADPRTWFGALQQQAA-TPAPFRELASAGAATLDEVDLPHRKQEPYRYTDLEAIFRHSYDAT-AGLPVSQEFAQKYLSEASKGQQLVFVNGRFNAQLSDTSAVP--EGVYVGSALG--AGEHQAAVMGVLDHLPEVGANKNTCQGSLPFAALNQACFADAAAVVIPPNVTVEQPIQVLFVTHAPKENEGGEGGAICHPRLAIVAGEGSSALVMQSYVGEGD-YFANCVTRSVVGKGA 240
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A7S2MCQ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCQ0_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.650e-27 Identity = 88/235 (37.45%), Postives = 134/235 (57.02%), Query Frame = 2 Query: 365 EWFDWVRGQAPPRP--EALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAG-GAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSA---EHMPQVQELLAHLPEVDA--DHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGE--SHLTNALGRVIVHEGA 1039 EWF+ V ++ P + L+ + L + P RK EP+RYT+L MF T++ G G ++ E + + SA Q+VF++G+ + LSD S L + +GG+S+ + +P+V + L +PE+D D RT QG+ F SLNQAC SD A I V GVEVE+P+QVLF+S ++ PSISH +L+V G+ + +S+ G G+ ++ TNAL V + GA Sbjct: 65 EWFERVSRKSALSPVVDLLSNTRLKGKDALTRVETPRRKLEPWRYTDLTSMFGTDYCRPQGLGDVSR-ETIEPYLEK-SASVQMVFMDGVFCESLSDMSALGSLS------IGGLSSLTPDVLPKVLQALEKVPEMDPTPDRRTCQGSAAFGSLNQACLSDCAYIFVPEGVEVERPIQVLFMSSATLAPSISHTQLVVVVESGASASLLQSYAGVGDGDTYFTNALTTVELGAGA 291
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A7S2W6I7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I7_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.720e-24 Identity = 84/232 (36.21%), Postives = 126/232 (54.31%), Query Frame = 2 Query: 368 WFDWVRGQAPPR---PEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVG--IEGLVATHLGGVSAEHMPQVQELLAHLPEVD-ADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPS-ISHPRLLVSAGQGSKLRIRESF-TGFGESHLTNALGRVIVHEGA 1039 WF+ A P P + E S + L + +P RKQE +R+ ++ MF S + +A++ + A++AG VFV+G+ ELSD + + G V++ +S H+ + EL PEV +DHRT QGA FA+LNQACF D A I V GV+VE+PV+VLFVS S S+PR +++ G+ ++L + +S+ T G+ H TN L V + E A Sbjct: 98 WFEAALEAAVPDTGLPPQVVEKRSEGKTLLPDHNVPQRKQEAWRFNNIQTMFAIEPSTPADSSSVSSDALAPYMYAETAGATAVFVDGVFRPELSDLGSVPDNVVFGAVSSVGDRLSETHLGMLDEL----PEVKGSDHRTNQGAAAFAALNQACFVDSACIYVPDGVQVEQPVEVLFVSTASTSARPTSYPRAIIAMGKDAELSLVQSYATVGGDKHFTNGLTVVAIDENA 325
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A2V7UJP9_9BACT (Fe-S cluster assembly protein SufD n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7UJP9_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.420e-17 Identity = 77/231 (33.33%), Postives = 122/231 (52.81%), Query Frame = 2 Query: 365 EWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNF--VAGGAGSLATGEAVSEFRSADS-AGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPS--ISHPRLLVSAGQGSKLRIRESFTGF-GESHLTNALGRVIVHEGA 1039 E+ + G++ P P L E A + ++ P +E +R+T + + RT F A G GS V+ F + G Q+VFV+G L LS + GL L V + + + L +HL V +D GA FA LN A F D A + + PG+ V+KP+ ++F+S GP+ ISHPR +V AG+GS+++I ES+ G G ++L NA+ ++++ +GA Sbjct: 10 EFEAFAAGRSTPEPAWLREQREEAIARFQDRGFPTVAEEEWRFTSVAPIARTAFRRPAPGEGSGVRTADVAAFGFEGAFEGHQIVFVDGRLAPGLSS---ITPEGGLQICSLADVLSR---EPERLRSHLGRVVSD-----GASSFADLNAAFFEDGAFVFIPPGLAVDKPIHLVFMSSRGTGPASTISHPRTVVVAGRGSQVQIVESYAGVPGAAYLANAVTQIVLEDGA 229
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A8J7E6Q9_9CYAN (Fe-S cluster assembly protein SufD n=1 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7E6Q9_9CYAN) HSP 1 Score: 95.1 bits (235), Expect = 7.160e-17 Identity = 78/232 (33.62%), Postives = 115/232 (49.57%), Query Frame = 2 Query: 392 APPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTG-FGESHLTNALGRVIVHEGADVVSIRFEIYYCGGF 1084 A P AL+EL + AE L+E P+ +QE +R+T+L + +F A A T V+ R ++AG Q+V VNG ++ ELS L EG + LG E +P+V + LA + H F +LN F D V+ + V VE P+Q++++S P+++ PR LV A GS L + E F G F HLTNA+ + + A V R + G F Sbjct: 31 AVPAAVALSELRARAEALLKEQIFPSTRQEDWRFTDLSALLSVDF-APAAEPAWTEAGVAGLRLPETAGAQIVVVNGRVSAELSHLGSLP--EGAIVGSLGS-RPELLPKVADRLA---QASGGHEV------FTALNTVGFQDAVVVWLPRNVVVETPMQIIYISHTQGAPTMALPRCLVVAESGSSLTLVEDFWGDFAGIHLTNAVTEIWLDASAQVNHSRIQREGAGTF 249
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A7V9NID7_9BACT (Fe-S cluster assembly protein SufD n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9NID7_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 1.300e-16 Identity = 80/227 (35.24%), Postives = 110/227 (48.46%), Query Frame = 2 Query: 377 WVRGQAPP--RPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGI--EGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVS--DGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGA 1039 WV APP P L L + + P + E +R+T + + +F G S T +++F D+A +LV VNG + ELS GL G +A L G E QE L L +VD FA+LN A D A + + G VE P+Q+LFVS D G +SHPRLLV AG+ S+ R+ E++ G G S+ TN + V+V EGA Sbjct: 11 WVSA-APPVAGPRWLQALRERGTARFRALGFPTVRDEEWRFTNVSPISNGDFRPAGP-SPVTLNRLAQFIYGDAA-HRLVVVNGRFSPELSRLDGLPQTVRAGSLAGVLHGGQQEDSDLAQEHLGALADVDDR--------AFAALNTAHLDDGAYVFIADGAVVEDPLQILFVSSPDAGSGAPVSHPRLLVVAGENSQARMVETYVGTGGSYFTNGVTEVVVGEGA 226
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A0G4FNN7_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FNN7_9ALVE) HSP 1 Score: 95.1 bits (235), Expect = 1.690e-16 Identity = 79/229 (34.50%), Postives = 114/229 (49.78%), Query Frame = 2 Query: 368 WFDWVRGQAPPRPEALAELSSAA-EKKLEEIPLPNRKQEPFRYTE-LEKMFRTNFVAGGAGSLAT--GEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQE--LLAHLPEVDADHRTRQ---------------GALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFV------SDGSVGPSISHPRLLVSAGQGSKLRIRES 973 W V ++P AL E + A E L+ +P P RK E FR+ + L+K+++T F + G + EA+S F D A LV VNG++ ELS S LGG E + ++ LL+ +PE + R G FA+LN AC SD AV+ V PGV+VEKP+Q+L V SD P+ SHPR+++S G+G++ R+ S Sbjct: 118 WNGIVNSRSPDVVSALVEQTRAVGETALKSVPNPTRKLEAFRHQKNLDKLYQTQFKSSSDGKTVSVSREALSPF-VCDEAEDVLVLVNGVVRPELSALS---SASEFYLGSLGGAGDEIVSVLEREGLLSFIPEWTNFDQLRDYEDSYPVFDRKKFDHGMAKFAALNLACASDAAVLRVNPGVKVEKPLQILHVAVAPEESDAETLPTASHPRVILSMGEGAQARVVHS 342
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A6M0G4P3_9CYAN (Fe-S cluster assembly protein SufD n=1 Tax=Symploca sp. SIO2E6 TaxID=2607809 RepID=A0A6M0G4P3_9CYAN) HSP 1 Score: 93.6 bits (231), Expect = 2.410e-16 Identity = 70/227 (30.84%), Postives = 115/227 (50.66%), Query Frame = 2 Query: 413 LAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAV--SEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALP-FASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTG---------FGESHLTNALGRVIVHEGADVVSIR 1057 L EL +AE ++E+ +P+++QE +R+T+L + + F A S+++G + S F ++A LVF+NG+ +LS +GL G+ +L + E+ ++Q+ L +QGA F +LN A +DVAV+ V VE+P+Q+LFV P I PR LV A GS+L++ E + + + TN + + V E A V R Sbjct: 32 LEELRHSAEAIVQELAIPSKRQEEWRFTDLSSLLQVQFQAVDPQSISSGSQLDLSPFTLPETAQSCLVFINGVYAPQLSTVTGLPA--GVFVGNLAALPPEYTSRLQDYLGR----------QQGASEVFTALNTAGLTDVAVVWVAKDTIVEQPIQLLFVCTTQAAPIICQPRCLVVAEAGSQLQLVEHYGADIEGCPDIPINKPYFTNQVTEIWVEENAAVTHTR 246 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10793.1.1 >prot_C-tenellus_contig10793.1.1 ID=prot_C-tenellus_contig10793.1.1|Name=mRNA_C-tenellus_contig10793.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=317bp MAPLTLALVTTVLALIAHCDAFIPPSSVTHWCQARYGARTGWLGRSGTGGback to top mRNA from alignment at C-tenellus_contig10793:1392..5328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10793.1.1 ID=mRNA_C-tenellus_contig10793.1.1|Name=mRNA_C-tenellus_contig10793.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3937bp|location=Sequence derived from alignment at C-tenellus_contig10793:1392..5328+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10793:1392..5328+ >mRNA_C-tenellus_contig10793.1.1 ID=mRNA_C-tenellus_contig10793.1.1|Name=mRNA_C-tenellus_contig10793.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=951bp|location=Sequence derived from alignment at C-tenellus_contig10793:1392..5328+ (Choristocarpus tenellus KU2346)back to top |