prot_C-tenellus_contig10793.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10793.1.1
Unique Nameprot_C-tenellus_contig10793.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length317
Homology
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: D8LLY7_ECTSI (FeS assembly protein SufD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY7_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 4.090e-68
Identity = 134/286 (46.85%), Postives = 177/286 (61.89%), Query Frame = 0
Query:   38 ARTGWLGRSGTG-------------GAV---LAETSEPETTASE----VMSERRDPKEWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLA--TGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGADV 301
            AR+   GR G G             GAV   L ET +   + +E    V   RRDP+ WFD +R  A PRP++L ELS A E +L E+ LP RKQEP+RYT+LE ++RT+F +    + A  T  A+       S GQQ+VFVNG+ + ELSD S L G+EGLVA H+G +    + Q +E+L++LPE DAD RT QG+L FASLNQACF+D  VIMV  GV VEKP+QV+F S+G  GP++SHPRL+V AG  S + + +S+   G   L N   RV+V + A V
Sbjct:   63 ARSAQAGRQGDGVLSATGVATEDNQGAVAGSLLETQQKGVSNNEMKPFVRVPRRDPRMWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEEGPTVSHPRLVVKAGADSHVTLTQSYLSRGGVCLANGFTRVLVGDRATV 348          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A6H5JB34_9PHAE (SufBD_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB34_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.200e-64
Identity = 128/270 (47.41%), Postives = 172/270 (63.70%), Query Frame = 0
Query:   40 TGWLGRSGTGGAV--LAETSEPETTASE----VMSERRDPKEWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLA--TGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGADV 301
            TG +     G AV  L ET +   + +E    V   RRDP+ WFD +R  A PRP++L ELS A E +L E+ LP RKQEP+RYT+LE ++RT+F +    + A  T  A+       S GQQ+VFVNG+ + ELSD S L G+EGLVA H+G +    + Q +E+L++LPE DAD RT QG+L FASLNQACF+D  VI+V  GV VEKP+QV+F S+G   P++SHPRL+V AG  S + + +S+   G   L N   RV+V + A V
Sbjct:  241 TGVVTEDNQGAAVGSLLETQQKGVSNNEMNPFVRVPRRDPRVWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFKSAALTTAAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGTPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIIVADGVTVEKPIQVIFFSEGEEVPTVSHPRLVVKAGADSHMTLTQSYLSRGGVCLANGFTRVLVGDRATV 510          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A836CQZ7_9STRA (SufBD_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQZ7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.590e-48
Identity = 109/245 (44.49%), Postives = 154/245 (62.86%), Query Frame = 0
Query:   62 TASEVMSERRDPKEWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGL-VATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVS------DGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGA 299
            T   +  +R DP+ WF  ++ QA   P    EL+SA    L+E+ LP+RKQEP+RYT+LE +FR ++ A  AG   + E   ++ S  S GQQLVFVNG  N +LSDTS +   EG+ V + LG  + EH   V  +L HLPEV A+  T QG+LPFA+LNQACF+D A +++ P V VE+P+QVLFV+      +G  G +I HPRL + AG+GS   + +S+ G G+ +  N + R +V +GA
Sbjct:    3 TGVNLAPKRADPRTWFGALQQQAA-TPAPFRELASAGAATLDEVDLPHRKQEPYRYTDLEAIFRHSYDAT-AGLPVSQEFAQKYLSEASKGQQLVFVNGRFNAQLSDTSAVP--EGVYVGSALG--AGEHQAAVMGVLDHLPEVGANKNTCQGSLPFAALNQACFADAAAVVIPPNVTVEQPIQVLFVTHAPKENEGGEGGAICHPRLAIVAGEGSSALVMQSYVGEGD-YFANCVTRSVVGKGA 240          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A7S2MCQ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCQ0_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.380e-30
Identity = 88/235 (37.45%), Postives = 134/235 (57.02%), Query Frame = 0
Query:   75 EWFDWVRGQAPPRP--EALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAG-GAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSA---EHMPQVQELLAHLPEVDA--DHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGE--SHLTNALGRVIVHEGA 299
            EWF+ V  ++   P  + L+      +  L  +  P RK EP+RYT+L  MF T++    G G ++  E +  +    SA  Q+VF++G+  + LSD S L  +       +GG+S+   + +P+V + L  +PE+D   D RT QG+  F SLNQAC SD A I V  GVEVE+P+QVLF+S  ++ PSISH +L+V    G+   + +S+ G G+  ++ TNAL  V +  GA
Sbjct:   65 EWFERVSRKSALSPVVDLLSNTRLKGKDALTRVETPRRKLEPWRYTDLTSMFGTDYCRPQGLGDVSR-ETIEPYLEK-SASVQMVFMDGVFCESLSDMSALGSLS------IGGLSSLTPDVLPKVLQALEKVPEMDPTPDRRTCQGSAAFGSLNQACLSDCAYIFVPEGVEVERPIQVLFMSSATLAPSISHTQLVVVVESGASASLLQSYAGVGDGDTYFTNALTTVELGAGA 291          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A7S2W6I7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.330e-26
Identity = 84/232 (36.21%), Postives = 126/232 (54.31%), Query Frame = 0
Query:   76 WFDWVRGQAPPR---PEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVG--IEGLVATHLGGVSAEHMPQVQELLAHLPEVD-ADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPS-ISHPRLLVSAGQGSKLRIRESF-TGFGESHLTNALGRVIVHEGA 299
            WF+     A P    P  + E  S  +  L +  +P RKQE +R+  ++ MF          S  + +A++ +  A++AG   VFV+G+   ELSD   +    + G V++    +S  H+  + EL    PEV  +DHRT QGA  FA+LNQACF D A I V  GV+VE+PV+VLFVS  S      S+PR +++ G+ ++L + +S+ T  G+ H TN L  V + E A
Sbjct:   98 WFEAALEAAVPDTGLPPQVVEKRSEGKTLLPDHNVPQRKQEAWRFNNIQTMFAIEPSTPADSSSVSSDALAPYMYAETAGATAVFVDGVFRPELSDLGSVPDNVVFGAVSSVGDRLSETHLGMLDEL----PEVKGSDHRTNQGAAAFAALNQACFVDSACIYVPDGVQVEQPVEVLFVSTASTSARPTSYPRAIIAMGKDAELSLVQSYATVGGDKHFTNGLTVVAIDENA 325          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A2V7UJP9_9BACT (Fe-S cluster assembly protein SufD n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7UJP9_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 9.100e-19
Identity = 77/231 (33.33%), Postives = 122/231 (52.81%), Query Frame = 0
Query:   75 EWFDWVRGQAPPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNF--VAGGAGSLATGEAVSEFRSADS-AGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPS--ISHPRLLVSAGQGSKLRIRESFTGF-GESHLTNALGRVIVHEGA 299
            E+  +  G++ P P  L E    A  + ++   P   +E +R+T +  + RT F   A G GS      V+ F    +  G Q+VFV+G L   LS    +    GL    L  V +    + + L +HL  V +D     GA  FA LN A F D A + + PG+ V+KP+ ++F+S    GP+  ISHPR +V AG+GS+++I ES+ G  G ++L NA+ ++++ +GA
Sbjct:   10 EFEAFAAGRSTPEPAWLREQREEAIARFQDRGFPTVAEEEWRFTSVAPIARTAFRRPAPGEGSGVRTADVAAFGFEGAFEGHQIVFVDGRLAPGLSS---ITPEGGLQICSLADVLSR---EPERLRSHLGRVVSD-----GASSFADLNAAFFEDGAFVFIPPGLAVDKPIHLVFMSSRGTGPASTISHPRTVVVAGRGSQVQIVESYAGVPGAAYLANAVTQIVLEDGA 229          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A8J7E6Q9_9CYAN (Fe-S cluster assembly protein SufD n=1 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7E6Q9_9CYAN)

HSP 1 Score: 95.5 bits (236), Expect = 2.190e-18
Identity = 78/232 (33.62%), Postives = 115/232 (49.57%), Query Frame = 0
Query:   84 APPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTG-FGESHLTNALGRVIVHEGADVVSIRFEIYYCGGF 314
            A P   AL+EL + AE  L+E   P+ +QE +R+T+L  +   +F A  A    T   V+  R  ++AG Q+V VNG ++ ELS    L   EG +   LG    E +P+V + LA   +    H        F +LN   F D  V+ +   V VE P+Q++++S     P+++ PR LV A  GS L + E F G F   HLTNA+  + +   A V   R +    G F
Sbjct:   31 AVPAAVALSELRARAEALLKEQIFPSTRQEDWRFTDLSALLSVDF-APAAEPAWTEAGVAGLRLPETAGAQIVVVNGRVSAELSHLGSLP--EGAIVGSLGS-RPELLPKVADRLA---QASGGHEV------FTALNTVGFQDAVVVWLPRNVVVETPMQIIYISHTQGAPTMALPRCLVVAESGSSLTLVEDFWGDFAGIHLTNAVTEIWLDASAQVNHSRIQREGAGTF 249          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A0G4FNN7_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FNN7_9ALVE)

HSP 1 Score: 95.1 bits (235), Expect = 4.920e-18
Identity = 79/229 (34.50%), Postives = 114/229 (49.78%), Query Frame = 0
Query:   76 WFDWVRGQAPPRPEALAELSSAA-EKKLEEIPLPNRKQEPFRYTE-LEKMFRTNFVAGGAGSLAT--GEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQE--LLAHLPEVDADHRTRQ---------------GALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFV------SDGSVGPSISHPRLLVSAGQGSKLRIRES 277
            W   V  ++P    AL E + A  E  L+ +P P RK E FR+ + L+K+++T F +   G   +   EA+S F   D A   LV VNG++  ELS  S            LGG   E +  ++   LL+ +PE     + R                G   FA+LN AC SD AV+ V PGV+VEKP+Q+L V      SD    P+ SHPR+++S G+G++ R+  S
Sbjct:  118 WNGIVNSRSPDVVSALVEQTRAVGETALKSVPNPTRKLEAFRHQKNLDKLYQTQFKSSSDGKTVSVSREALSPF-VCDEAEDVLVLVNGVVRPELSALS---SASEFYLGSLGGAGDEIVSVLEREGLLSFIPEWTNFDQLRDYEDSYPVFDRKKFDHGMAKFAALNLACASDAAVLRVNPGVKVEKPLQILHVAVAPEESDAETLPTASHPRVILSMGEGAQARVVHS 342          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A7V9NID7_9BACT (Fe-S cluster assembly protein SufD n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9NID7_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 5.580e-18
Identity = 80/227 (35.24%), Postives = 110/227 (48.46%), Query Frame = 0
Query:   79 WVRGQAPP--RPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGI--EGLVATHLGGVSAEHMPQVQELLAHLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVS--DGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGA 299
            WV   APP   P  L  L      +   +  P  + E +R+T +  +   +F   G  S  T   +++F   D+A  +LV VNG  + ELS   GL      G +A  L G   E     QE L  L +VD           FA+LN A   D A + +  G  VE P+Q+LFVS  D   G  +SHPRLLV AG+ S+ R+ E++ G G S+ TN +  V+V EGA
Sbjct:   11 WVSA-APPVAGPRWLQALRERGTARFRALGFPTVRDEEWRFTNVSPISNGDFRPAGP-SPVTLNRLAQFIYGDAA-HRLVVVNGRFSPELSRLDGLPQTVRAGSLAGVLHGGQQEDSDLAQEHLGALADVDDR--------AFAALNTAHLDDGAYVFIADGAVVEDPLQILFVSSPDAGSGAPVSHPRLLVVAGENSQARMVETYVGTGGSYFTNGVTEVVVGEGA 226          
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Match: A0A2W7A582_9CYAN (Fe-S cluster assembly protein SufD n=9 Tax=Cyanobacteria TaxID=1117 RepID=A0A2W7A582_9CYAN)

HSP 1 Score: 93.6 bits (231), Expect = 1.020e-17
Identity = 74/233 (31.76%), Postives = 111/233 (47.64%), Query Frame = 0
Query:   84 APPRPEALAELSSAAEKKLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADSAGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLA-HLPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSDGSVGPSISHPRLLVSAGQGSKLRIRESFTGFGES-HLTNALGRVIVHEGADVVSIRFEIYYCGGF 314
            A P+   L E+ S A   L E   P+ +QE +R+T+L  M   +F A G  S  T   ++E R  ++AG Q+V VNG +++ELS    L   EG +   LG       P++Q  LA  L +   +H        F +LN   F D  V+ +   + VE P+Q+++VS       +  PR LV A  GS L + E + G   + H TNA+  + +   A +   R E    G F
Sbjct:   31 AVPKGLELEEVRSRAASFLNEQTFPSTRQEDWRFTDLSAMLAIDFAAAGE-SAVTEADIAELRLPETAGAQVVVVNGRVSRELSQLGSLP--EGAIIGSLGD-----RPELQSQLADRLAQASGNHEV------FTALNTVGFQDAVVVWLPRNLVVETPIQIIYVSQAQGDSLLVQPRCLVVAESGSALTLVEDYWGNSTATHFTNAVTELWLDANAQITHSRIEREGAGTF 249          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10793.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLY7_ECTSI4.090e-6846.85FeS assembly protein SufD n=1 Tax=Ectocarpus silic... [more]
A0A6H5JB34_9PHAE1.200e-6447.41SufBD_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CQZ7_9STRA1.590e-4844.49SufBD_N domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2MCQ0_9STRA7.380e-3037.45Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W6I7_9STRA1.330e-2636.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V7UJP9_9BACT9.100e-1933.33Fe-S cluster assembly protein SufD n=1 Tax=Acidoba... [more]
A0A8J7E6Q9_9CYAN2.190e-1833.62Fe-S cluster assembly protein SufD n=1 Tax=Nodosil... [more]
A0A0G4FNN7_9ALVE4.920e-1834.50Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7V9NID7_9BACT5.580e-1835.24Fe-S cluster assembly protein SufD n=1 Tax=Acidoba... [more]
A0A2W7A582_9CYAN1.020e-1731.76Fe-S cluster assembly protein SufD n=9 Tax=Cyanoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011542SUF system FeS cluster assembly, SufDPANTHERPTHR43575PROTEIN ABCI7, CHLOROPLASTICcoord: 87..302
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..316
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR037284SUF system FeS cluster assembly, SufBD superfamilySUPERFAMILY101960Stabilizer of iron transporter SufDcoord: 85..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10793contigC-tenellus_contig10793:1534..3875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10793.1.1mRNA_C-tenellus_contig10793.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10793 1392..5328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10793.1.1 ID=prot_C-tenellus_contig10793.1.1|Name=mRNA_C-tenellus_contig10793.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=317bp
MAPLTLALVTTVLALIAHCDAFIPPSSVTHWCQARYGARTGWLGRSGTGG
AVLAETSEPETTASEVMSERRDPKEWFDWVRGQAPPRPEALAELSSAAEK
KLEEIPLPNRKQEPFRYTELEKMFRTNFVAGGAGSLATGEAVSEFRSADS
AGQQLVFVNGILNKELSDTSGLVGIEGLVATHLGGVSAEHMPQVQELLAH
LPEVDADHRTRQGALPFASLNQACFSDVAVIMVEPGVEVEKPVQVLFVSD
GSVGPSISHPRLLVSAGQGSKLRIRESFTGFGESHLTNALGRVIVHEGAD
VVSIRFEIYYCGGFEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011542SUF_FeS_clus_asmbl_SufD
IPR037284SUF_FeS_clus_asmbl_SufBD_sf