Homology
BLAST of mRNA_C-linearis_contig98.17135.1 vs. uniprot
Match: D8LJU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU1_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 2.930e-15 Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 0 Query: 17 MTERLRLLHEKRAILSSELREFSARSGASSSERLIAADNAVAVMATAGLTGVLAGVAAARFFAARRTNRSRPRRGGGVDETKRF 100
MT+RL+LLHE++ LSSELR SA+ +SS+ RL+AADNA+A M T+G+ GV AG A ARF AARR RR D+ + F
Sbjct: 1 MTQRLKLLHEEKTALSSELRTLSAKGSSSSTVRLVAADNAMAAMVTSGIIGVFAGGALARFLAARRGRSRLSRRQQDKDKDRHF 84
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 56..79 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..55 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 80..110 |
None | No IPR available | TMHMM | TMhelix | | coord: 58..80 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig98.17135.1 ID=prot_C-linearis_contig98.17135.1|Name=mRNA_C-linearis_contig98.17135.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=111bp MELEQRDAEAEALCHGMTERLRLLHEKRAILSSELREFSARSGASSSERL IAADNAVAVMATAGLTGVLAGVAAARFFAARRTNRSRPRRGGGVDETKRF DWPPPKAPSS* back to top
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