Homology
BLAST of mRNA_C-linearis_contig98.17135.1 vs. uniprot
Match:
D8LJU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU1_ECTSI)
HSP 1 Score: 74.3 bits (181), Expect = 2.930e-15
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 0
Query: 17 MTERLRLLHEKRAILSSELREFSARSGASSSERLIAADNAVAVMATAGLTGVLAGVAAARFFAARRTNRSRPRRGGGVDETKRF 100
MT+RL+LLHE++ LSSELR SA+ +SS+ RL+AADNA+A M T+G+ GV AG A ARF AARR RR D+ + F
Sbjct: 1 MTQRLKLLHEEKTALSSELRTLSAKGSSSSTVRLVAADNAMAAMVTSGIIGVFAGGALARFLAARRGRSRLSRRQQDKDKDRHF 84
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17135.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M E L E Q R D A E A E A L C H G M T E R L R L L H E K R A I L S S E L R E F S A R S G A S S S E R L I A A D N A V A V M A T A G L T G V L A G V A A A R F F A A R R T N R S R P R R G G G V D E T K R F D W P P P K A P S S * 10 20 30 40 50 60 70 80 90 100 110 Expect = 2.93e-15 / Id = 53.57 Sequence D8LJU1_ECTSI
Match Name E-value Identity Description
D8LJU1_ECTSI 2.930e-15 53.57 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M E L E Q R D A E A E A L C H G M T E R L R L L H E K R A I L S S E L R E F S A R S G A S S S E R L I A A D N A V A V M A T A G L T G V L A G V A A A R F F A A R R T N R S R P R R G G G V D E T K R F D W P P P K A P S S * 10 20 30 40 50 60 70 80 90 100 110 Score = Score = Score = Score = Sequence TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 56..79 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..55 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 80..110 None No IPR available TMHMM TMhelix coord: 58..80
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig98.17135.1 ID=prot_C-linearis_contig98.17135.1|Name=mRNA_C-linearis_contig98.17135.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=111bp back to top