prot_C-linearis_contig97.17075.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE) HSP 1 Score: 237 bits (605), Expect = 2.760e-75 Identity = 152/192 (79.17%), Postives = 158/192 (82.29%), Query Frame = 0 Query: 64 NTPPRIGVHPPTPPPPGQ----MMAYPQQHPQQHPKXXXXXXXXX------RMGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 245 N PPR HPP P PPGQ +M YPQ XXXXXXXXX RMG PGM FQHP PXXXXXX AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD EETPRL++VSADEIIEAQQEASAE+RQDAKLDWLFQDLS Sbjct: 58 NPPPR--THPPNPYPPGQQQQQVMVYPQHXXXXXXXXXXXXXXXXXXXXXXRMGLPGMGFQHPLPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI) HSP 1 Score: 230 bits (587), Expect = 4.330e-74 Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 0 Query: 106 MGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 245 MG PGM FQHP PXXXXXX AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD EETPRL++VSADEIIEAQQEASAEERQDAKLDWLFQDLS Sbjct: 1 MGLPGMGFQHPVPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.750e-40 Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 0 Query: 127 AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPR-----LKKVSADEIIEAQQEASAEERQDAKLDWLFQD 243 +FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFVG ++GDI LGLY+VRGD++VL+GE+ A LK+V+ADEI++AQQE+ + K++W F D Sbjct: 116 SFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVDP---FKVEWDFGD 234
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD) HSP 1 Score: 130 bits (327), Expect = 5.900e-35 Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 0 Query: 128 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 241 +FPGS SL EQLDK+++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH MF DI LGL ++RGD +VL+GELD E + P +K+ S +EI+EA++ +A+ + W F Sbjct: 4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.660e-33 Identity = 66/115 (57.39%), Postives = 90/115 (78.26%), Query Frame = 0 Query: 128 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRL-KKVSADEIIEAQQEASAEERQDAKLDWLF 241 FF G SL EQLDK+++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V +FGDI LGLY+VRGD +VL+GE+D E + + ++VSA+EI+ AQ+ + E++ K+ W F Sbjct: 4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQR--NTEDK--TKVAWDF 114
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM) HSP 1 Score: 126 bits (316), Expect = 2.560e-33 Identity = 59/115 (51.30%), Postives = 87/115 (75.65%), Query Frame = 0 Query: 129 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 242 FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH G +F DI LGL ++RGD +VL+GELD+ E + P +K+V +E++EA+++ + + W F+ Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK) HSP 1 Score: 124 bits (311), Expect = 1.320e-32 Identity = 64/112 (57.14%), Postives = 85/112 (75.89%), Query Frame = 0 Query: 130 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 241 PG L EQLDKR+++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V +GDI LGLYLVRGDA+VL+GE+D A E L++VSADEI+E ++E + A+ DW F Sbjct: 7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESR----ARDDWDF 113
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A4D9CWQ3_9STRA (Sm domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ3_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.370e-32 Identity = 72/135 (53.33%), Postives = 96/135 (71.11%), Query Frame = 0 Query: 108 PPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 242 PPG + P P + PG+ASL EQLD+RV+VVLRDGR+LVGV+RS+DQFSN+VLEDT+ERH V +GD+ LGLYLVRGDA+VL+GE++A E L+KV+ +EI+E Q + AK++W F+ Sbjct: 221 PPGPHYMLP-PRPFVAVLPDYLPGAASLVEQLDRRVLVVLRDGRNLVGVLRSFDQFSNMVLEDTYERHVVDGKYGDLPLGLYLVRGDAVVLLGEVEAE-REGKSLEKVTTEEILELLQGSG---EAGAKVEWDFE 350
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL) HSP 1 Score: 123 bits (309), Expect = 3.150e-32 Identity = 60/113 (53.10%), Postives = 86/113 (76.11%), Query Frame = 0 Query: 129 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWL 240 FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH G +F DI LGL ++RG +VL+GELD+ E + P +K+V +E++EA++ + E L +L Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.240e-32 Identity = 61/127 (48.03%), Postives = 86/127 (67.72%), Query Frame = 0 Query: 116 PHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 242 P P PG+ASL +QLDKR+++VLRDGRHLVG++RS+DQFSN+VLEDTHERH + D+ALGL++VRGD +VL+GELD E + L D ++EA++ ++ K++W F+ Sbjct: 2 PPPPMEPTQMGLLLPGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAERNSAF-----TKVEWDFE 123 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig97.17075.1 ID=prot_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bpback to top |