mRNA_C-linearis_contig97.17075.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig97.17075.1
Unique Name	mRNA_C-linearis_contig97.17075.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 2.220e-71
Identity = 152/192 (79.17%), Postives = 158/192 (82.29%), Query Frame = 3

Query:  315 NTPPRIGVHPPTPPPPGQ----MMAYPQQHPQQHPKXXXXXXXXX------RMGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 860
            N PPR   HPP P PPGQ    +M YPQ        XXXXXXXXX      RMG PGM FQHP PXXXXXX  AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD   EETPRL++VSADEIIEAQQEASAE+RQDAKLDWLFQDLS
Sbjct:   58 NPPPR--THPPNPYPPGQQQQQVMVYPQHXXXXXXXXXXXXXXXXXXXXXXRMGLPGMGFQHPLPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 3.050e-70
Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 3

Query:  441 MGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 860
            MG PGM FQHP PXXXXXX  AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD   EETPRL++VSADEIIEAQQEASAEERQDAKLDWLFQDLS
Sbjct:    1 MGLPGMGFQHPVPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.640e-37
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 3

Query:  504 AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPR-----LKKVSADEIIEAQQEASAEERQDAKLDWLFQD 854
            +FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFVG ++GDI LGLY+VRGD++VL+GE+ A            LK+V+ADEI++AQQE+  +     K++W F D
Sbjct:  116 SFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVD---PFKVEWDFGD 234

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD)

HSP 1 Score: 130 bits (327), Expect = 2.020e-32
Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 3

Query:  507 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 848
            +FPGS SL EQLDK+++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH    MF DI LGL ++RGD +VL+GELD   E + P +K+ S +EI+EA++  +A+     +  W F
Sbjct:    4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM)

HSP 1 Score: 126 bits (317), Expect = 5.020e-31
Identity = 59/115 (51.30%), Postives = 87/115 (75.65%), Query Frame = 3

Query:  510 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 851
            FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH  G +F DI LGL ++RGD +VL+GELD+  E + P +K+V  +E++EA+++ +       +  W F+
Sbjct:    5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.330e-31
Identity = 62/98 (63.27%), Postives = 81/98 (82.65%), Query Frame = 3

Query:  507 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRL-KKVSADEIIEAQ 797
            FF G  SL EQLDK+++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V  +FGDI LGLY+VRGD +VL+GE+D   E + +  ++VSA+EI+ AQ
Sbjct:    4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQ 101

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK)

HSP 1 Score: 124 bits (312), Expect = 2.310e-30
Identity = 62/105 (59.05%), Postives = 82/105 (78.10%), Query Frame = 3

Query:  513 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQD 827
            PG   L EQLDKR+++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V   +GDI LGLYLVRGDA+VL+GE+D A  E   L++VSADEI+E ++E  +  R D
Sbjct:    7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESRARDD 110

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A4D9CWQ3_9STRA (Sm domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ3_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.650e-30
Identity = 72/135 (53.33%), Postives = 96/135 (71.11%), Query Frame = 3

Query:  447 PPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 851
            PPG  +  P P         + PG+ASL EQLD+RV+VVLRDGR+LVGV+RS+DQFSN+VLEDT+ERH V   +GD+ LGLYLVRGDA+VL+GE++A   E   L+KV+ +EI+E  Q +       AK++W F+
Sbjct:  221 PPGPHYMLP-PRPFVAVLPDYLPGAASLVEQLDRRVLVVLRDGRNLVGVLRSFDQFSNMVLEDTYERHVVDGKYGDLPLGLYLVRGDAVVLLGEVEAE-REGKSLEKVTTEEILELLQGSG---EAGAKVEWDFE 350

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL)

HSP 1 Score: 124 bits (310), Expect = 5.260e-30
Identity = 60/113 (53.10%), Postives = 86/113 (76.11%), Query Frame = 3

Query:  510 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWL 845
            FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH  G +F DI LGL ++RG  +VL+GELD+  E + P +K+V  +E++EA++  + E      L +L
Sbjct:    5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117

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BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match: A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.480e-30
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 3

Query:  471 PHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQD 854
            P P           PG+ASL +QLDKR+++VLRDGRHLVG++RS+DQFSN+VLEDTHERH    +  D+ALGL++VRGD +VL+GELD   E +  L     D ++EA++ ++       K++W F++
Sbjct:    2 PPPPMEPTQMGLLLPGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAERNSAF-----TKVEWDFEN 124

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot

BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A6H5JKJ0_9PHAE	2.220e-71	79.17	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=E...	[more]
D8LL00_ECTSI	3.050e-70	90.71	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=E...	[more]
A0A835ZG91_9STRA	1.640e-37	63.93	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=T...	[more]
K3WSU0_GLOUD	2.020e-32	55.65	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=G...	[more]
H3GH42_PHYRM	5.020e-31	51.30	U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=...	[more]
A0A7S2XVC4_9STRA	6.330e-31	63.27	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=F...	[more]
A0A6V1WH12_HETAK	2.310e-30	59.05	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=H...	[more]
A0A4D9CWQ3_9STRA	3.650e-30	53.33	Sm domain-containing protein n=2 Tax=Monodopsidace...	[more]
A0A0P1A9M0_PLAHL	5.260e-30	53.10	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=P...	[more]
A0A7S2CG66_9STRA	7.480e-30	47.66	U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=D...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	232.3
Seed ortholog evalue	2.5e-58
Seed eggNOG ortholog	2880.D8LL00
Preferred name	LSM1
KEGG ko	ko:K03952,ko:K12620,ko:K14794,ko:K16931
KEGG TC	3.D.1.6
KEGG Pathway	ko00190,ko01100,ko03018,ko04714,ko04723,ko04913,ko04925,ko04927,ko04932,ko04934,ko04979,ko05010,ko05012,ko05016,map00190,map01100,map03018,map04714,map04723,map04913,map04925,map04927,map04932,map04934,map04979,map05010,map05012,map05016
KEGG Module	M00146,M00397
Hectar predicted targeting category	other localisation
GOs	GO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0001101,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005845,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009628,GO:0009631,GO:0009651,GO:0009892,GO:0009987,GO:0010035,GO:0010467,GO:0010468,GO:0010494,GO:0010605,GO:0010629,GO:0010721,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019827,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030424,GO:0030425,GO:0032501,GO:0032502,GO:0032991,GO:0033962,GO:0034518,GO:0034622,GO:0034641,GO:0034655,GO:0035770,GO:0036002,GO:0036464,GO:0036477,GO:0042221,GO:0042538,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0065003,GO:0065007,GO:0070925,GO:0071044,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0098727,GO:0120025,GO:0120038,GO:0120114,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1990124,GO:1990726,GO:1990904,GO:2000026
EggNOG free text desc.	deadenylation-dependent decapping of nuclear-transcribed mRNA
EggNOG OGs	KOG1782@1,KOG1782@2759
Ec32 ortholog description	Sm-like protein LSm1
Ec32 ortholog	Ec-11_006170.1
COG Functional cat.	J
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03009,ko03019
Exons	3
Model size	1662
Cds size	738
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig97.17075.1	prot_C-linearis_contig97.17075.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig97 211803..213638 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930831.0788436-UTR-C-linearis_contig97:211677..211802	1622930831.0788436-UTR-C-linearis_contig97:211677..211802	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 211678..211802 +
1690881272.07695-UTR-C-linearis_contig97:211677..211802	1690881272.07695-UTR-C-linearis_contig97:211677..211802	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 211678..211802 +
1622930831.1472538-UTR-C-linearis_contig97:213638..214437	1622930831.1472538-UTR-C-linearis_contig97:213638..214437	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 213639..214437 +
1690881272.1171384-UTR-C-linearis_contig97:213638..214437	1690881272.1171384-UTR-C-linearis_contig97:213638..214437	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 213639..214437 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930831.09208-CDS-C-linearis_contig97:211802..212234	1622930831.09208-CDS-C-linearis_contig97:211802..212234	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 211803..212234 +
1690881272.091032-CDS-C-linearis_contig97:211802..212234	1690881272.091032-CDS-C-linearis_contig97:211802..212234	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 211803..212234 +
1622930831.1113935-CDS-C-linearis_contig97:212555..212658	1622930831.1113935-CDS-C-linearis_contig97:212555..212658	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 212556..212658 +
1690881272.0995724-CDS-C-linearis_contig97:212555..212658	1690881272.0995724-CDS-C-linearis_contig97:212555..212658	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 212556..212658 +
1622930831.1288826-CDS-C-linearis_contig97:213435..213638	1622930831.1288826-CDS-C-linearis_contig97:213435..213638	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 213436..213638 +
1690881272.1079519-CDS-C-linearis_contig97:213435..213638	1690881272.1079519-CDS-C-linearis_contig97:213435..213638	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 213436..213638 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig97:211678..214437+
coding sequence from alignment at C-linearis_contig97:211678..214437+

protein sequence of mRNA_C-linearis_contig97.17075.1

>prot_C-linearis_contig97.17075.1 ID=prot_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bp
MADTPKERASRAQKAQAQQPKARAAPRTQGPASGGPRPARGTSDGGAGAG
AGAGASAVAAHSHNTPPRIGVHPPTPPPPGQMMAYPQQHPQQHPKHPQHP
QYPQRMGPPGMTFQHPHPPPPPPPPPAFFPGSASLFEQLDKRVMVVLRDG
RHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMG
ELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS*

mRNA from alignment at C-linearis_contig97:211678..214437+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig97.17075.1 ID=mRNA_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2760bp|location=Sequence derived from alignment at C-linearis_contig97:211678..214437+ (Chordaria linearis ClinC8C monoicous)
AGAAGGAGCAAGCAGTCTGTGTGTGCCCCAAAACGGGGTGAAAAGAAGCA
CAAGGCAAGGCAAGGCAACGGGACGGTAGGGCGAAAGGAAAGGCTCACAA
GTAGGCACCCACCCGTCAGCACAAAATGGCGGACACTCCGAAAGAAAGAG
CCAGCAGGGCTCAAAAGGCGCAAGCACAACAACCAAAGGCACGAGCAGCG
CCACGGACACAGGGGCCGGCATCCGGGGGGCCGAGACCTGCGAGGGGCAC
GTCAGACGGCGGGGCAGGGGCAGGGGCAGGGGCAGGGGCATCGGCGGTGG
CTGCGCATAGCCATAACACTCCTCCCCGAATAGGAGTACATCCACCTACG
CCTCCGCCCCCCGGCCAGATGATGGCGTACCCGCAGCAGCACCCGCAGCA
GCATCCGAAGCATCCACAGCACCCGCAATACCCGCAGCGGATGGGTCCGC
CGGGGATGACCTTTCAGCACCCTCACCCTCCGCCGCCTCCGCCACCACCC
CCGGCGTTTTTTCCTGGGTCTGCGAGCCTGTTCGAGCAGCTCGACAAAAG
GGTCATGGTGGGTGACTTTAGACTTTTGCGGGGAGCAGGGGGTAGGTTGT
GAAAGGGGGACTTTGGAGCACTTTGGAGGGGTAGGTGGGTGCTAATCGCT
CTTTTGGGTCGTAGTTCAGGGTGAAGTCGGAAAACGCGAGAAGTCGCAGA
CTACTAGGACCTGGAGGGAAATGAGCGATGGCAAATAGTATGATGTCACA
CGTGTGGCGTGGCTGGGGCGTGGGCAGTATCTCGTGGGTGTCAGGTCGCC
CGAGCTTGTAGACGGAGCAAGACCTATGTTCGCTGGTCCCTACAACCGGT
AACGAAACAACGCAACATAACGTACCAGGTTGTGCTTCGCGACGGGAGGC
ACCTGGTGGGAGTGATGAGAAGCTACGACCAGTTCTCCAACATCGTCCTG
GAGGACACGCACGAGCGGCACTTTGTTGGGGGTGAGCTCAGGCTCGGGTT
GATCGTTCCTATCTCGTTTGTGTTGGCGTTGTGGGTACACTGCTGTGTAG
GCTGGCTAAGACAAAGCCTATCATGTTTGGAACGGCTACTCGTGTGTGTG
TATGACGGGATGATGGGTGATGGGACGAATCGGCGATACGCTTAACGAAA
ACGTTTGGCTCGCAAGGTGAAATATGCTACAGCAGTATTATGGTACTGGT
ACAGCACTTGCTGGTAGGCAAACTCAAGACGCACTCGCGATACTAATATA
GAAGTATGTTGATCGAAATTCTCGTCCCGCAGGTGTAAGACTATGGCAGT
TGCACCACTCGCCCTGTTTGTTGCAGTGTGGGGTAGATAGCGAGGGCGTT
CCGAGAGCACGGTGTGAGGCCCCTTCCCCATTCCCACAGTATAGAGAGCC
GCTTGAAGATCGATGTCAAATGCATCACCTCCGGGGACTGAGTTGCCCGC
CCGGCGCCTTATAGAACACCGATGGCAAACTTTTCAATCAAATTTTACGA
CACTTGTGCCGGAGTTTGCAATGTCGGGTGTTCGAATCCTCCACCCCTCA
GAACCAGACAAGTAGCAATGGCATTAGAGGAGATTGCTAGGACGAGGTGT
ATGCCCGCTGTGCAGCAGGGATGTCGCGCTTGCCTAAGGAGCACCTGCAC
GATTGATGATTGATATGTCGCACGTGTGTGCTTCTTCTTTCGTCTCCAAT
TTTTCATCTTTACCTCTAACTTATTCTGGTTTTGTCAACCTGGTGCGGTG
TGCTCCAGATATGTTCGGGGATATTGCGCTGGGGCTTTACCTGGTGCGAG
GGGACGCCCTCGTGCTCATGGGGGAACTGGACGCGGCCTTAGAGGAGACG
CCCAGGCTGAAGAAGGTCTCTGCCGACGAGATCATCGAGGCGCAGCAGGA
GGCCTCCGCGGAGGAGCGGCAGGACGCAAAGCTAGACTGGTTGTTCCAGG
ACTTGTCATGATCGTGGTACATTTTTGGTTCCATCATGCGACGTAGTATT
TCTTCGTTTGGTTTTGCTTCGCGGGGCAGACCGGTAGATCTTTTGCTCAC
GGCCTAACTTTTTTGGGAAGCTCGGGGGATCTGCAGGAGTTTTTGGGGTG
TTCGGTAGTTTGATTGATGATTGATTCGTTTCTCGATATTTAACGGCTGA
TGCGTCTTTTCCTACATGTATGTCCTTCCAGCTCTGTGGCTGGTTTTCGC
TCAGGTCTTGTGACGGTTGCTCAGAAACTTGTCAACCCTTGAAGTCACAT
GCTAAAAATGTCTTATCGTTGGAAATATGCGTGGTTGGCCTCAATAATTG
GTATCTACTTGTAGGGCCGCCCAACGTTTTACGTTTTGCAGCTCGAGGAG
CTACTGCTGTACCCGCTGCTGTACCTACCGGTGAACGGTTAAGGCACCTC
TCCAGGCAATGTAGGAAGCGGTCGTGACAGGCGACAAGACGTAGGGGCAG
CAAACGGTTCGCTTGTCGAGCATATGTGAGGGCGCGTGAAGCGCAAAAGC
TGCGTTTTGATCGGGGTCGTTTGCTTGATTCAGGCTGGCGCGTTGGTTGG
TTCCCCCGTGGAAAGTCGAGATCGAAGGGCCATGTGCTGTTTGGTGTAGT
TGTGTTTTTTAACCGGGGCATTCATTCGTTGAATCAAACTTAGCCGTCTA
CTTATTAAAGGGCTACATGAAGAGTTCGGCGCGGCGATGATATGTAAACC
GCCAAAACAAAAGTCTGCCTTTCCGCCGGGCAAGGCGGACATAAATATGC
CAGAGTGCGA

Coding sequence (CDS) from alignment at C-linearis_contig97:211678..214437+

>mRNA_C-linearis_contig97.17075.1 ID=mRNA_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at C-linearis_contig97:211678..214437+ (Chordaria linearis ClinC8C monoicous)
ATGGCGGACACTCCGAAAGAAAGAGCCAGCAGGGCTCAAAAGGCGCAAGC
ACAACAACCAAAGGCACGAGCAGCGCCACGGACACAGGGGCCGGCATCCG
GGGGGCCGAGACCTGCGAGGGGCACGTCAGACGGCGGGGCAGGGGCAGGG
GCAGGGGCAGGGGCATCGGCGGTGGCTGCGCATAGCCATAACACTCCTCC
CCGAATAGGAGTACATCCACCTACGCCTCCGCCCCCCGGCCAGATGATGG
CGTACCCGCAGCAGCACCCGCAGCAGCATCCGAAGCATCCACAGCACCCG
CAATACCCGCAGCGGATGGGTCCGCCGGGGATGACCTTTCAGCACCCTCA
CCCTCCGCCGCCTCCGCCACCACCCCCGGCGTTTTTTCCTGGGTCTGCGA
GCCTGTTCGAGCAGCTCGACAAAAGGGTCATGATGGCGGACACTCCGAAA
GAAAGAGCCAGCAGGGCTCAAAAGGCGCAAGCACAACAACCAAAGGCACG
AGCAGCGCCACGGACACAGGGGCCGGCATCCGGGGGGCCGAGACCTGCGA
GGGGCACGTCAGACGGCGGGGCAGGGGCAGGGGCAGGGGCAGGGGCATCG
GCGGTGGCTGCGCATAGCCATAACACTCCTCCCCGAATAGGAGTACATCC
ACCTACGCCTCCGCCCCCCGGCCAGATGATGGCGTACCCGCAGCAGCACC
CGCAGCAGCATCCGAAGCATCCACAGCACCCGCAATACCCGCAGCGGATG
GGTCCGCCGGGGATGACCTTTCAGCACCCTCACCCTCCGCCGCCTCCGCC
ACCACCCCCGGCGTTTTTTCCTGGGTCTGCGAGCCTGTTCGAGCAGCTCG
ACAAAAGGGTCATGGTTGTGCTTCGCGACGGGAGGCACCTGGTGGGAGTG
ATGAGAAGCTACGACCAGTTCTCCAACATCGTCCTGGAGGACACGCACGA
GCGGCACTTTGTTGGGGGTTGTGCTTCGCGACGGGAGGCACCTGGTGGGA
GTGATGAGAAGCTACGACCAGTTCTCCAACATCGTCCTGGAGGACACGCA
CGAGCGGCACTTTGTTGGGGATATGTTCGGGGATATTGCGCTGGGGCTTT
ACCTGGTGCGAGGGGACGCCCTCGTGCTCATGGGGGAACTGGACGCGGCC
TTAGAGGAGACGCCCAGGCTGAAGAAGGTCTCTGCCGACGAGATCATCGA
GGCGCAGCAGGAGGCCTCCGCGGAGGAGCGGCAGGACGCAAAGCTAGACT
GGTTGTTCCAGGACTTGTCATGAATATGTTCGGGGATATTGCGCTGGGGC
TTTACCTGGTGCGAGGGGACGCCCTCGTGCTCATGGGGGAACTGGACGCG
GCCTTAGAGGAGACGCCCAGGCTGAAGAAGGTCTCTGCCGACGAGATCAT
CGAGGCGCAGCAGGAGGCCTCCGCGGAGGAGCGGCAGGACGCAAAGCTAG
ACTGGTTGTTCCAGGACTTGTCATGA