Homology
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
D7G7U8_ECTSI (Thylakoid lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U8_ECTSI)
HSP 1 Score: 239 bits (611), Expect = 7.880e-73
Identity = 163/213 (76.53%), Postives = 179/213 (84.04%), Query Frame = 1
Query: 178 SMSLRGNAAKCFPAILLGVALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 816
+M+L +AA+C PA+LLGV L TS PLLD+ A ++ VLGASPVFAD DKGMSSVSDSKLS+GAASTGDKGARKTVTRGVNIENADYH KDLS VSFQQSLVRGTN XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +VTEAY+SGATKMEPA +EGADFTDTFLRKDQV+YLC L++ KGTNPV+GVDTRDSLGCP
Sbjct: 38 TMNLFNDAARCVPAVLLGVTLTTS---APLLDSPAAHT-AVLGASPVFAD-DKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A835YUD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD1_9STRA)
HSP 1 Score: 153 bits (387), Expect = 5.800e-40
Identity = 107/160 (66.88%), Postives = 120/160 (75.00%), Query Frame = 1
Query: 334 KGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 813
+G SSVSD+K+ GAAST D G+RK +TRGVN+ENAD+HGKD+SGVSFQQSLVRGTN XXXXXXXXXXXXXXXXXXXXXXXX Y+SGATK EP ++EGADFTDTFLRKDQ+ YLC + KGTNPVTGVDT DSL C
Sbjct: 75 EGASSVSDTKMLSGAASTLDTGSRKIITRGVNLENADFHGKDMSGVSFQQSLVRGTNFASSKLIGSGFFDADLSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATKFEPKDIEGADFTDTFLRKDQIMYLCAI--AKGTNPVTGVDTADSLSC 232
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A7S2CVZ3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVZ3_9STRA)
HSP 1 Score: 125 bits (313), Expect = 1.130e-29
Identity = 102/196 (52.04%), Postives = 127/196 (64.80%), Query Frame = 1
Query: 235 ALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAAST--GDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 816
A+++ + P A+ + +L A+P FA+ D G S+V ++K+ G AST +GARKT+TRGV ++ A++ G+DL+GVSFQQS +RG XXXXXXXXXXXXXXXXXXXXXXXXXX GAT + A +EGADFTDTFLRKDQ K LC + KGTNP TGVDTRDSL CP
Sbjct: 15 AVSSMEIKAPAAAASALAAALLLSATPAFAESDGGASNVENTKIMNGGASTIVNQRGARKTITRGVQLDKANFAGEDLTGVSFQQSQIRGGVFEKTKLLGASFFDATLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSFKDAKIEGADFTDTFLRKDQQKELCA--TAKGTNPTTGVDTRDSLMCP 208
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A7S1BVJ1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVJ1_9STRA)
HSP 1 Score: 120 bits (300), Expect = 6.730e-28
Identity = 110/218 (50.46%), Postives = 132/218 (60.55%), Query Frame = 1
Query: 163 PSMATSMSLRGNAAKCFPAILLGVALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 813
PS A S+ R AA A+LL +LA SPL DN A + VS+ K++ G AST G T+TRGVN++ AD+ G+ L GV+FQQS+VR NXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVV EAY+ G T ++EGADF+DT+LR DQ KYLCE + KGTN VTG+DTR+SL C
Sbjct: 6 PSAAASLPDR--AASLAAALLLASSLALSPLPSSAADNGATD--------------------VSNQKITTGGASTLQSGRTITITRGVNLDRADFGGQKLKGVAFQQSIVRDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNLEMCQLNRANLRDAVVREAYVGGTTMFTGIKSIEGADFSDTYLRADQKKYLCEHPTAKGTNSVTGMDTRESLMC 201
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A448ZI41_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI41_9STRA)
HSP 1 Score: 120 bits (302), Expect = 8.040e-28
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 1
Query: 313 PVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 813
P FAD+ G ++ S++K++ G AST G +TRGVN++N+++ G++L GV+FQQS+VR +N X XXXXXXXXXXXXXXXXXXX V+ E Y+SGAT E ++EG+D+++TFLRKDQ KYLCE + KGTNPVTGVDTR+SL C
Sbjct: 68 PAFADQ--GATAASNAKITTGGASTLQSGRTIAITRGVNLDNSNFXGQNLKGVAFQQSIVRDSNFKGANXVXXXXXXXXXXXXXXXXXXXTLSNVEMAQFNRANLKNTVMKEVYVSGATLFEGVKSIEGSDWSETFLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMC 233
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A7S3L2E8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2E8_9STRA)
HSP 1 Score: 119 bits (297), Expect = 5.020e-27
Identity = 111/180 (61.67%), Postives = 135/180 (75.00%), Query Frame = 1
Query: 280 AVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 816
AV G+L P A D G S S++K++ G AST G +TRGVN++ +D+ ++L GV+FQQS+VR + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A++ E Y+SGAT E ++EG+D+TDT LRKDQ KYLC + KGTNPVTGVDTR+SL CP
Sbjct: 64 AVFLAGILALHPAMAAGDGGASVGSNAKITTGGASTLQSGRTIAITRGVNLDKSDFSNQNLKGVAFQQSIVRDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNAILKEMYVSGATLFEGVKDIEGSDWTDTELRKDQKKYLCNHPTAKGTNPVTGVDTRESLMCP 243
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A7S1QSD0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QSD0_ALECA)
HSP 1 Score: 116 bits (291), Expect = 3.200e-26
Identity = 89/154 (57.79%), Postives = 108/154 (70.13%), Query Frame = 1
Query: 358 SKLSIGAASTG-DKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGCP 816
SK+ G AST G RK +TRG+N+E A+Y G+DLSGVSFQQS+VR XXXXXXXXXXXXXXXXXXXXXXXXX A+ T+ Y++G T+MEP ++GADFT T RKDQ+ YLC++ +GTNPVT VDTR+SL CP
Sbjct: 89 SKIKAGGASTSAGLGTRKIITRGINLEKANYAGQDLSGVSFQQSIVREXXXXXXXXXXXXXXXXXXXXXXXXXXXMTQANLELARATDAIFTNAIATDMYVNGTTRMEPKRIDGADFTGTIFRKDQLNYLCKI--AEGTNPVTKVDTRESLMCP 240
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A7S4HSJ0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSJ0_9STRA)
HSP 1 Score: 115 bits (289), Expect = 8.640e-26
Identity = 97/213 (45.54%), Postives = 131/213 (61.50%), Query Frame = 1
Query: 178 SMSLRGNAAKCFPAILLGVALATSPLSVPLLDNHAVNSNGVLGASPVFADEDKGMSSVSDSKLSIGAASTGDKGARKTVTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPA-NVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 813
++ + AA F A+ + A+A SP + A +D G S+ +++K++ G AST G +TRGVN++ +D+ G++L GV+FQQS+VR +NXXXXXXXXXXXXXXXXXXXXXXXXXX AV+ E Y+SGAT + ++EG+D+TDT LR+DQ KYLC + KGTNP TGVDTR+SL C
Sbjct: 61 ALKAKSAAASVFAALSIAAAVAFSPPAA-------------------IAADDTGASTAANAKITTGGASTLQSGRTIAITRGVNLDRSDFGGQNLKGVAFQQSIVRDSNXXXXXXXXXXXXXXXXXXXXXXXXXXTLANFEMAQFNRANLKNAVLREMYVSGATILTGVKDIEGSDWTDTMLRRDQTKYLCSHPTAKGTNPTTGVDTRESLMC 254
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A7S3Y7I5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7I5_9EUKA)
HSP 1 Score: 115 bits (288), Expect = 9.660e-26
Identity = 108/159 (67.92%), Postives = 129/159 (81.13%), Query Frame = 1
Query: 349 VSDSKLSIGAAST-GDKGARKT---VTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 813
SDSK++ GAAST GDKG TRGV ++ +D+ GKDLSGVSFQQS+VR TN XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ EAYISG+T + N++ +D+TDTF+RKDQ++YLC++ S GTNP TGV TR+SLGC
Sbjct: 90 ASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIAS--GTNPTTGVGTRESLGC 246
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Match:
A0A7S2TUI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TUI3_9EUKA)
HSP 1 Score: 115 bits (288), Expect = 1.010e-25
Identity = 108/159 (67.92%), Postives = 129/159 (81.13%), Query Frame = 1
Query: 349 VSDSKLSIGAAST-GDKGARKT---VTRGVNIENADYHGKDLSGVSFQQSLVRGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVTEAYISGATKMEPANVEGADFTDTFLRKDQVKYLCELDSTKGTNPVTGVDTRDSLGC 813
SDSK++ GAAST GDKG TRGV ++ +D+ GKDLSGVSFQQS+VR TN XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ EAYISG+T + N++ +D+TDTF+RKDQ++YLC++ S GTNP TGV TR+SLGC
Sbjct: 92 ASDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQIAS--GTNPTTGVGTRESLGC 248
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17167.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 7.88e-73 / Id = 76.53 Expect = 5.80e-40 / Id = 66.88 Expect = 1.13e-29 / Id = 52.04 Expect = 6.73e-28 / Id = 50.46 Expect = 8.04e-28 / Id = 51.79 Expect = 5.02e-27 / Id = 61.67 Expect = 3.20e-26 / Id = 57.79 Expect = 8.64e-26 / Id = 45.54 Expect = 9.66e-26 / Id = 67.92 Expect = 1.01e-25 / Id = 67.92 Sequence D7G7U8_ECTSI A0A835YUD1_9STRA A0A7S2CVZ3_9STRA A0A7S1BVJ1_9STRA A0A448ZI41_9STRA A0A7S3L2E8_9STRA A0A7S1QSD0_ALECA A0A7S4HSJ0_9STRA A0A7S3Y7I5_9EUKA A0A7S2TUI3_9EUKA Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 238.8 Seed ortholog evalue 2.7e-60 Seed eggNOG ortholog 2880.D7G7U8 Hectar predicted targeting category chloroplast GOs GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009543,GO:0009579,GO:0016020,GO:0031976,GO:0031977,GO:0031978,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035 EggNOG free text desc. Pentapeptide repeats (9 copies) EggNOG OGs 2QQA1@2759,COG1357@1 Ec32 ortholog description Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15) Ec32 ortholog Ec-06_000240.1 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA Exons 7 Model size 1471 Cds size 759 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930849.4996796-UTR-C-linearis_contig99:294360..294420 1622930849.4996796-UTR-C-linearis_contig99:294360..294420 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 294361..294420 + 1690881281.375971-UTR-C-linearis_contig99:294360..294420 1690881281.375971-UTR-C-linearis_contig99:294360..294420 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 294361..294420 + 1622930849.6434295-UTR-C-linearis_contig99:299210..299862 1622930849.6434295-UTR-C-linearis_contig99:299210..299862 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 299211..299862 + 1690881281.467029-UTR-C-linearis_contig99:299210..299862 1690881281.467029-UTR-C-linearis_contig99:299210..299862 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig99 299211..299862 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930849.5310478-CDS-C-linearis_contig99:294420..294559 1622930849.5310478-CDS-C-linearis_contig99:294420..294559 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 294421..294559 + 1690881281.3899932-CDS-C-linearis_contig99:294420..294559 1690881281.3899932-CDS-C-linearis_contig99:294420..294559 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 294421..294559 + 1622930849.5492544-CDS-C-linearis_contig99:295807..296005 1622930849.5492544-CDS-C-linearis_contig99:295807..296005 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 295808..296005 + 1690881281.402858-CDS-C-linearis_contig99:295807..296005 1690881281.402858-CDS-C-linearis_contig99:295807..296005 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 295808..296005 + 1622930849.5627549-CDS-C-linearis_contig99:296515..296574 1622930849.5627549-CDS-C-linearis_contig99:296515..296574 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 296516..296574 + 1690881281.4129777-CDS-C-linearis_contig99:296515..296574 1690881281.4129777-CDS-C-linearis_contig99:296515..296574 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 296516..296574 + 1622930849.5779366-CDS-C-linearis_contig99:296979..297055 1622930849.5779366-CDS-C-linearis_contig99:296979..297055 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 296980..297055 + 1690881281.422796-CDS-C-linearis_contig99:296979..297055 1690881281.422796-CDS-C-linearis_contig99:296979..297055 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 296980..297055 + 1622930849.5902588-CDS-C-linearis_contig99:297891..297973 1622930849.5902588-CDS-C-linearis_contig99:297891..297973 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 297892..297973 + 1690881281.433843-CDS-C-linearis_contig99:297891..297973 1690881281.433843-CDS-C-linearis_contig99:297891..297973 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 297892..297973 + 1622930849.6057208-CDS-C-linearis_contig99:298510..298596 1622930849.6057208-CDS-C-linearis_contig99:298510..298596 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 298511..298596 + 1690881281.446664-CDS-C-linearis_contig99:298510..298596 1690881281.446664-CDS-C-linearis_contig99:298510..298596 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 298511..298596 + 1622930849.624244-CDS-C-linearis_contig99:299091..299210 1622930849.624244-CDS-C-linearis_contig99:299091..299210 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 299092..299210 + 1690881281.455525-CDS-C-linearis_contig99:299091..299210 1690881281.455525-CDS-C-linearis_contig99:299091..299210 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig99 299092..299210 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig99.17167.1
>prot_C-linearis_contig99.17167.1 ID=prot_C-linearis_contig99.17167.1|Name=mRNA_C-linearis_contig99.17167.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=253bp
MLSTARKSVVLLFAGASVANSFVVTSPLHLSTRPPSMATSMSLRGNAAKC back to top mRNA from alignment at C-linearis_contig99:294361..299862+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig99.17167.1 ID=mRNA_C-linearis_contig99.17167.1|Name=mRNA_C-linearis_contig99.17167.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5502bp|location=Sequence derived from alignment at C-linearis_contig99:294361..299862+ (Chordaria linearis ClinC8C monoicous)GTTTGGGTTGAGCACTGCTCAACGCGAGCACAGCTGTTATCCTGGGACAT
ACACGGCGCG ATGTTGTCTACTGCTAGAAAAAGCGTGGTGCTACTCTTTG
CAGGGGCATCAGTCGCAAATTCGTTCGTTGTGACCAGCCCATTGCACCTC
TCTACCCGTCCTCCCTCGATGGCAACATCAATGAGCCTTCGTGGTAACG G
TGGGTCAGAAGTTAGTAGGCACAGCAGTTCGCGTTTGCGTGCGGGTGTTC
ACTGCTGTGATGATATGCTGCTATGTATGTGTTCAGTATACTGTGAGTTT
CGAGCGCCGAAGGCCCTTGAGTCTCGATGTGCAGTGCTGTACGTGTCTTG
TGTTGTTGTGTGTGTCTTTGTTGTTTTTTTCATGTGTCATTTGTGTGTCT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCGTCCCATTTATTTTGG
CGACAGTCCCTTCCGATCAAGGCCAGACGTGTACTACACGTTGCGGTGTA
TTTAGAGTACTGCACTTGTTCGGTGCATTTTTCTGTACTACTAGAACCAA
CCGGGGTCACACAGGAGGGGGTAAACACTGGGGCTTTTTTCTTCCTTTTC
TGGTTCTTTTTTGCCCCACCTTCCTCCTTCGGTGCTTGCCTTGGATTTTA
TCGCGAGAAGGATGCAGCCATCCCTTTCCCTCGTCAACGTGCTAAGTCGA
AGTTTGGTACTCACGAGCTTTTTCAGCTATGGTATCGCTTTCACCTGCAA
AGTCGCAAAATAATCACCTTTGCTTGGAATTGAACTCCAGACTTTGCTGC
TAGTGGGTTCGAGCTTAAACCACTAGTCTAGTCCACCGGGGCGACCGGCA
GTGCTGTTCTCTAAATACACCACAACGTGTAGTACACACGTCTCGCCTTG
ATCGGAAAGCGACTGTCGCCAAAATAATTGGGACGAAAACACACACACAT
AGACAAGAGACAAGAGAGCAACGCGAAACTTTCGTGGTAATAACTCTACA
ACGGTAGGCAACTCGTGACTCGTGACTCGTGACTCGTTCGCAGTCGTTCT
CCCCTTAACGCCCAGAACGCGCGTCTCGTTTGGAACATTAAAATGCCACA
AAAGAGGATGCGTGAGCTCTGTTTTCCGCCCCAAAAAAACTCTCTGCACT
GCTGCTGCTGCCGCGATCATGTACTGCAGCCTCGCCGTAGTGCGTTGCTC
AGTGCCAGTGTTGTACTTGCTGACGACCACACTCGAAGAAATCTGTCCAC
GTTTGGCAGCACGTATTATAGTGATGGACACCAACGCATTTACTGTTCGT
GCCAAGATCTGCATGTCTTATTATCTGCAATAACTCCCACGCCACCCTCC
TGCTGTACACTAGCTTTTGCCCTGGAAAACGGTGTTCTTGTCCGATTCAA
CCGCCCGTCCCGCTCTCCTCGCTTTTGGTTCTGCTTCTCTTGTTCAGCGG
CGAAGTGTTTTCCTGCCATTCTTCTCGGGGTAGCCTTGGCAACATCACCA
TTGTCAGTCCCACTTCTTGACAACCACGCGGTCAACTCTAACGGGGTTTT
GGGCGCCTCTCCCGTGTTCGCGGACGAAGATAAGGGAATGTCTAGCGTGA
GTGACTCCAAGCTGTCTATTGGCGCCGCAAGCACGGGCGACAAAG GTAGG
CACTGCGCGTCTGCTTGGCCAGGCTGTCTCTGTGATTGAAGAGGTCCTTG
CGATTCGGATATTTCCTCCTGGTCGGAGCCCATCGAGCATGCTTTCGAGC
CAGCAAGACTCGTGGCCATCATGTACTGCGCATGCCAACCTCCTTCATCC
CGTGTTTAACGCAGCAACAGCAACTTTGAACGACGGGCTCTTGCGTTTGG
GAAGGCATCACCATCGTGATTACTTATGCCTTATTTATGTATTCTCACAT
GATCACCAGCATGTCTTGTACGACGTCTATTCTCACCATGACAACAACTA
CTTTGGTCTTGCGTTGGCTCTGCGCGGGTACTACATGTAGGATGGATGAT
GGACGGATGGACGCGCAAGCAGCGTACCTGTTACCTGTTACTATACTTCT
GCTGTTGTTTCTGCAATGCAACACACTAACCCCCCGTTTTCCCGCTTTTT
GATGCTGTGGAAACAACGGCAATGGGTCGATTTAACTTGACTTGGCTTTT
AACAGGGGCGAGAAAAACCGTCACGCGAGGGGTCAACATTGAAAACGCCG
ACTACCACGGCAAG GTGGGTCAAGTACAATGACATTGCATGCACGCTATT
GTATTGTATTGTATTGTAGGGTTTCCGCTGGAAGTAAGCCAAGCCAAGAA
CACACCTCACCGAAAAAGACTTAAAACTTTCTAATAAATAATACGGAGTA
TAATACTTCGTAGGTGTTGCTTTCCCCTCTTTCCTGCGACACTTGTGCTT
TCAATTAGATATGGTTGTTGTTCCTACAAGAGCCAACACGAGTAGATGTT
CAGGTAGTAGTAGTCTTCAAGCGCGCGTGAAGAAGTTGCGGTACGGTACG
GTGCGGTCTGTCAGCCTTTTCTTGGAAGAAACAAGCCTGTGCTGGTAGCC
GCAAAGCGTGTGTGTGCGCCTTGTGATGACGGCAAACCCTGACTATGGTA
CGTATCGTATCAACAACAGGATCTGTCTGGCGTGTCCTTCCAGCAGTCCC
TGGTAAGAGGGACGAACTTCAAGGGATCCAAACTGGTGGCAGCAG GTGAG
TCCATTTACATACATACATACGTGTCAGTCAGCTCGGCCTTTGTGTTTTA
GTCGGTAGTCTACGCAGGCTTGTAGTAAGAAAACATATGGGATGAAGTAT
GGAATCGGCTGTGGGGGGGTCGGTGGTTGGGGTTAGGGTTACGGAGCCCC
CTGTACTCTAAATCACAGAAGTACAGTAATTTCTTCGCGAAGGCAGTCCG
TTTTAGTTCCACGGCAAGTAGCACGGTTGCTTCACAGGACCAGGGTGGGT
CATGAGTCATGGGTCATGGGTCACTCCAAAGCCTGAATGTCATGCACCGC
GGCCGCTGCCGTAGACACACGGGGCGGTGTCGAGTATTCGTTTCAATAAT
AGTGTTCCGCAGCTATTTAGTCTGCACTTTTGAGCACTTCAACAGCAGTG
TTCGTGTCCGCCGTCCTGATGTGGTCGTGGTCATACCAGCTGCAGTAGCT
CATACGGTACATGAGTACCAAAGGCTCGGCGAAGAAGCATACAAAACGCG
CCTTGATTTATCTACGAATACACAAGTAGTCTGGGTAGGCGTTGAATCTT
AATCTCCCCCGGTGTCGACTGTCTGTGCGGAAACGCGGAAATTTGAGACA
CCACAAAGACATTGTGATAGTGCAATTTCGATTTGTCCCTCTTGTCCCTT
TTTTCTTTTTTCCATTGGGTATCTTGTGCCTTGTCTTGTCTTGTCGTGTC
TTGTCTTGTCTTGTCTTGCCTTGTCTTTTCTTGTCTTGTCTTGTCTTATC
TTGTCTTATCTTGTCTTGTCTTGTCTTGTCGTGTCTTGTCGTGTCTTGTC
TTATCGTGTCTTGTCTTGTCTTGTCTTGCAGGGTTCTTCGACGCTGACCT
GTCGAACTGCAACTTCGAGTCTGCGAACATGAACCAAGCCAACCTTGAGC
TCGCCAACTTGAG GTGAGGTCATCTGGGCTTAAGCTTAGCTTGGCGGTGC
TGATATTTATACTTATACTTGTATATAGCACAAGAGGTTTGGGTTGACCC
CCATGTACCATCCGCTATCCCCGTCTACTGCTGTACCCCCGGCCGTGTTG
CTTCTCGATGTGTCGTGTCGTGCCAAGACGATTGTAAAAGACCACCGCTA
CAGCAGTGACAAGTGACACGGTTCGAAACGTACAAGAAGTAGGTGCATCC
GTTGCACACGTACGTGCAGCAGCTATGCAGGATCCTTCCCTTTGGCCCTA
AGTAGCACAGGGGGTCTCTTGCTGGTATAGGCGAAGTATGTCCCTACAGT
ACCCGCCAGCCTATTTGAAGCCCCCCCCCCCTCCCCCATCGTGTGTATGT
GGTTTGTGATTTGATGCATCTCCGGGCTCCTCCCTCCTTTGTTTCGCGTC
CTCTGTATCGATCGGTGTATCGATCCATGTATCGGTGTGTGTGTTGAATC
TCTTCTCTCCTCTTGCCGGGACTCGCTTTACCAATGGATCAATGCATCAG
CGGCGCAAATATGAAGAATGCCGTGGTCACGGAGGCGTATATCTCGGGTG
CCACCAAAATGGAGCCGGCAAATGTGGAGGGGGCGG GTGAGCGATCAGAT
AGTTTCTTTCGCTAAACAATTTTAAACGCTGCTTCATTATGTTTTGATTT
GTGCCTGGCGCTTTCCTTTTCCATTTCCATTTCCATTCCCATTCCCATTT
CCATGTTTTGTCTTTTGTCTTGCCGACTTTCGTCATGGGCGTAGGCATCG
GTGTAGGCACAGGTGTCACGCGCGTTTTCGCTGCAGGACTTCACCGCCCA
ACATAAGTTCCATGTGTATGGTTCCCTATCATATGTGCTGTTGCTTTGTC
CGAAAGGGCGTTTGACTTGAGTCAGCCGACCCGACTCGTTTAATGTAGGC
CGCACGTTTCCATGTTGCATCGATGCATGCACCGGCTGTGCGTTTGTTTC
TGAGTTGGTCTTGTCTTCCCTCTTTCGTACCCCCTCCCCCTCGCCCTACA
CCTCTACGACGTTTGTTTCGTTTTTCGGGGGGAAACTGCCGCGGCGAAAC
AAATGGAATGGGATGGAATCGAGCGGATCAGATTTCACGGACACGTTCCT
GAGGAAAGACCAGGTCAAGTACTTGTGCGAGCTAGACAGCACCAAGGGCA
CCAACCCTGTCACAGGGGTCGACACGCGGGATAGCTTGGGCTGCCCCTGA
TGTAGTCTAGAAGCGCTGCTGCTCCGCTGGGGGAGGCTGCGGAAGTCACT
ACTGCTGTCAGCGTAACCTCTTGAGTGAGAGGCATTTTCCGGAGCTAATT
TACTGCGCGGGAGCACGCACCGGCGGCAATGGGTGGCGCGAACATGTCGA
TTCGCCCGCAAGCTTGCATAAAGACAGATAGAGAAGACTAGATGGCCGTG
GGGGTGGAATAGCGACAGCGCCGTGCTCCGTTTGACTTGTTGTGTGATGC
CGCCGAGTGGGGCACCTTTCACGCGACGGCGTTTTCGTGTCTCGAGTCGA
ACCAACTTTTACTTTTCCCGCCGAGTCTGGATGCTACTCTGATGGGTTGT
GTTGTACAAAGGCAGGAAACGGCATCACTATCATCACTGCAAATATTAGA
AACCCGTAAGCCGCAAATCGGCATTCGAGGGTAGCGTCCGTCGGCTTGCA
CCGTGCTCACCAAACGGCAGATACGGGGGCCCGCAATATGTGGTAGACTA
GACTAGACCGCTGCTGTGGTGGTTGAGTGGTTGAGTCCCGATCAACGTCC
CTCCCGCATGGGATAGGGAAAGGACAAAAGCACGAGAAGAGGTAAAACAA
AATGCAGTGAGGGGGCTTAGGGAGCGAACCCGTTCAACTCTCAACTCGCA
AG back to top Coding sequence (CDS) from alignment at C-linearis_contig99:294361..299862+
>mRNA_C-linearis_contig99.17167.1 ID=mRNA_C-linearis_contig99.17167.1|Name=mRNA_C-linearis_contig99.17167.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at C-linearis_contig99:294361..299862+ (Chordaria linearis ClinC8C monoicous) back to top