Homology
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE)
HSP 1 Score: 238 bits (606), Expect = 2.220e-71
Identity = 152/192 (79.17%), Postives = 158/192 (82.29%), Query Frame = 3
Query: 315 NTPPRIGVHPPTPPPPGQ----MMAYPQQHPQQHPKXXXXXXXXX------RMGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 860
N PPR HPP P PPGQ +M YPQ XXXXXXXXX RMG PGM FQHP PXXXXXX AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD EETPRL++VSADEIIEAQQEASAE+RQDAKLDWLFQDLS
Sbjct: 58 NPPPR--THPPNPYPPGQQQQQVMVYPQHXXXXXXXXXXXXXXXXXXXXXXRMGLPGMGFQHPLPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI)
HSP 1 Score: 231 bits (588), Expect = 3.050e-70
Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 3
Query: 441 MGPPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDLS 860
MG PGM FQHP PXXXXXX AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV D+FGDI+LGLYLVRGDALVLMGELD EETPRL++VSADEIIEAQQEASAEERQDAKLDWLFQDLS
Sbjct: 1 MGLPGMGFQHPVPXXXXXX--AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA)
HSP 1 Score: 148 bits (373), Expect = 1.640e-37
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 3
Query: 504 AFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPR-----LKKVSADEIIEAQQEASAEERQDAKLDWLFQD 854
+FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFVG ++GDI LGLY+VRGD++VL+GE+ A LK+V+ADEI++AQQE+ + K++W F D
Sbjct: 116 SFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVD---PFKVEWDFGD 234
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD)
HSP 1 Score: 130 bits (327), Expect = 2.020e-32
Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 3
Query: 507 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 848
+FPGS SL EQLDK+++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH MF DI LGL ++RGD +VL+GELD E + P +K+ S +EI+EA++ +A+ + W F
Sbjct: 4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM)
HSP 1 Score: 126 bits (317), Expect = 5.020e-31
Identity = 59/115 (51.30%), Postives = 87/115 (75.65%), Query Frame = 3
Query: 510 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 851
FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH G +F DI LGL ++RGD +VL+GELD+ E + P +K+V +E++EA+++ + + W F+
Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA)
HSP 1 Score: 126 bits (316), Expect = 6.330e-31
Identity = 62/98 (63.27%), Postives = 81/98 (82.65%), Query Frame = 3
Query: 507 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRL-KKVSADEIIEAQ 797
FF G SL EQLDK+++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V +FGDI LGLY+VRGD +VL+GE+D E + + ++VSA+EI+ AQ
Sbjct: 4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQ 101
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK)
HSP 1 Score: 124 bits (312), Expect = 2.310e-30
Identity = 62/105 (59.05%), Postives = 82/105 (78.10%), Query Frame = 3
Query: 513 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQD 827
PG L EQLDKR+++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V +GDI LGLYLVRGDA+VL+GE+D A E L++VSADEI+E ++E + R D
Sbjct: 7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESRARDD 110
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
A0A4D9CWQ3_9STRA (Sm domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ3_9STRA)
HSP 1 Score: 131 bits (329), Expect = 3.650e-30
Identity = 72/135 (53.33%), Postives = 96/135 (71.11%), Query Frame = 3
Query: 447 PPGMTFQHPHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 851
PPG + P P + PG+ASL EQLD+RV+VVLRDGR+LVGV+RS+DQFSN+VLEDT+ERH V +GD+ LGLYLVRGDA+VL+GE++A E L+KV+ +EI+E Q + AK++W F+
Sbjct: 221 PPGPHYMLP-PRPFVAVLPDYLPGAASLVEQLDRRVLVVLRDGRNLVGVLRSFDQFSNMVLEDTYERHVVDGKYGDLPLGLYLVRGDAVVLLGEVEAE-REGKSLEKVTTEEILELLQGSG---EAGAKVEWDFE 350
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL)
HSP 1 Score: 124 bits (310), Expect = 5.260e-30
Identity = 60/113 (53.10%), Postives = 86/113 (76.11%), Query Frame = 3
Query: 510 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWL 845
FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH G +F DI LGL ++RG +VL+GELD+ E + P +K+V +E++EA++ + E L +L
Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Match:
A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA)
HSP 1 Score: 123 bits (309), Expect = 7.480e-30
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 3
Query: 471 PHPXXXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGDMFGDIALGLYLVRGDALVLMGELDAALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQD 854
P P PG+ASL +QLDKR+++VLRDGRHLVG++RS+DQFSN+VLEDTHERH + D+ALGL++VRGD +VL+GELD E + L D ++EA++ ++ K++W F++
Sbjct: 2 PPPPMEPTQMGLLLPGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAERNSAF-----TKVEWDFEN 124
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17075.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.22e-71 / Id = 79.17 Expect = 3.05e-70 / Id = 90.71 Expect = 1.64e-37 / Id = 63.93 Expect = 2.02e-32 / Id = 55.65 Expect = 5.02e-31 / Id = 51.30 Expect = 6.33e-31 / Id = 63.27 Expect = 2.31e-30 / Id = 59.05 Expect = 3.65e-30 / Id = 53.33 Expect = 5.26e-30 / Id = 53.10 Expect = 7.48e-30 / Id = 47.66 Sequence A0A6H5JKJ0_9PHAE D8LL00_ECTSI A0A835ZG91_9STRA K3WSU0_GLOUD H3GH42_PHYRM A0A7S2XVC4_9STRA A0A6V1WH12_HETAK A0A4D9CWQ3_9STRA A0A0P1A9M0_PLAHL A0A7S2CG66_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 232.3 Seed ortholog evalue 2.5e-58 Seed eggNOG ortholog 2880.D8LL00 Preferred name LSM1 KEGG ko ko:K03952,ko:K12620,ko:K14794,ko:K16931 KEGG TC 3.D.1.6 KEGG Pathway ko00190,ko01100,ko03018,ko04714,ko04723,ko04913,ko04925,ko04927,ko04932,ko04934,ko04979,ko05010,ko05012,ko05016,map00190,map01100,map03018,map04714,map04723,map04913,map04925,map04927,map04932,map04934,map04979,map05010,map05012,map05016 KEGG Module M00146,M00397 Hectar predicted targeting category other localisation GOs GO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0001101,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005845,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009628,GO:0009631,GO:0009651,GO:0009892,GO:0009987,GO:0010035,GO:0010467,GO:0010468,GO:0010494,GO:0010605,GO:0010629,GO:0010721,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019827,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030424,GO:0030425,GO:0032501,GO:0032502,GO:0032991,GO:0033962,GO:0034518,GO:0034622,GO:0034641,GO:0034655,GO:0035770,GO:0036002,GO:0036464,GO:0036477,GO:0042221,GO:0042538,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0065003,GO:0065007,GO:0070925,GO:0071044,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0098727,GO:0120025,GO:0120038,GO:0120114,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1990124,GO:1990726,GO:1990904,GO:2000026 EggNOG free text desc. deadenylation-dependent decapping of nuclear-transcribed mRNA EggNOG OGs KOG1782@1,KOG1782@2759 Ec32 ortholog description Sm-like protein LSm1 Ec32 ortholog Ec-11_006170.1 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko03009,ko03019 Exons 3 Model size 1662 Cds size 738 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930831.0788436-UTR-C-linearis_contig97:211677..211802 1622930831.0788436-UTR-C-linearis_contig97:211677..211802 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 211678..211802 + 1690881272.07695-UTR-C-linearis_contig97:211677..211802 1690881272.07695-UTR-C-linearis_contig97:211677..211802 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 211678..211802 + 1622930831.1472538-UTR-C-linearis_contig97:213638..214437 1622930831.1472538-UTR-C-linearis_contig97:213638..214437 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 213639..214437 + 1690881272.1171384-UTR-C-linearis_contig97:213638..214437 1690881272.1171384-UTR-C-linearis_contig97:213638..214437 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 213639..214437 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930831.09208-CDS-C-linearis_contig97:211802..212234 1622930831.09208-CDS-C-linearis_contig97:211802..212234 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 211803..212234 + 1690881272.091032-CDS-C-linearis_contig97:211802..212234 1690881272.091032-CDS-C-linearis_contig97:211802..212234 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 211803..212234 + 1622930831.1113935-CDS-C-linearis_contig97:212555..212658 1622930831.1113935-CDS-C-linearis_contig97:212555..212658 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 212556..212658 + 1690881272.0995724-CDS-C-linearis_contig97:212555..212658 1690881272.0995724-CDS-C-linearis_contig97:212555..212658 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 212556..212658 + 1622930831.1288826-CDS-C-linearis_contig97:213435..213638 1622930831.1288826-CDS-C-linearis_contig97:213435..213638 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 213436..213638 + 1690881272.1079519-CDS-C-linearis_contig97:213435..213638 1690881272.1079519-CDS-C-linearis_contig97:213435..213638 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 213436..213638 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17075.1
>prot_C-linearis_contig97.17075.1 ID=prot_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bp
MADTPKERASRAQKAQAQQPKARAAPRTQGPASGGPRPARGTSDGGAGAG back to top mRNA from alignment at C-linearis_contig97:211678..214437+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig97.17075.1 ID=mRNA_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2760bp|location=Sequence derived from alignment at C-linearis_contig97:211678..214437+ (Chordaria linearis ClinC8C monoicous)AGAAGGAGCAAGCAGTCTGTGTGTGCCCCAAAACGGGGTGAAAAGAAGCA
CAAGGCAAGGCAAGGCAACGGGACGGTAGGGCGAAAGGAAAGGCTCACAA
GTAGGCACCCACCCGTCAGCACAAA ATGGCGGACACTCCGAAAGAAAGAG
CCAGCAGGGCTCAAAAGGCGCAAGCACAACAACCAAAGGCACGAGCAGCG
CCACGGACACAGGGGCCGGCATCCGGGGGGCCGAGACCTGCGAGGGGCAC
GTCAGACGGCGGGGCAGGGGCAGGGGCAGGGGCAGGGGCATCGGCGGTGG
CTGCGCATAGCCATAACACTCCTCCCCGAATAGGAGTACATCCACCTACG
CCTCCGCCCCCCGGCCAGATGATGGCGTACCCGCAGCAGCACCCGCAGCA
GCATCCGAAGCATCCACAGCACCCGCAATACCCGCAGCGGATGGGTCCGC
CGGGGATGACCTTTCAGCACCCTCACCCTCCGCCGCCTCCGCCACCACCC
CCGGCGTTTTTTCCTGGGTCTGCGAGCCTGTTCGAGCAGCTCGACAAAAG
GGTCATG GTGGGTGACTTTAGACTTTTGCGGGGAGCAGGGGGTAGGTTGT
GAAAGGGGGACTTTGGAGCACTTTGGAGGGGTAGGTGGGTGCTAATCGCT
CTTTTGGGTCGTAGTTCAGGGTGAAGTCGGAAAACGCGAGAAGTCGCAGA
CTACTAGGACCTGGAGGGAAATGAGCGATGGCAAATAGTATGATGTCACA
CGTGTGGCGTGGCTGGGGCGTGGGCAGTATCTCGTGGGTGTCAGGTCGCC
CGAGCTTGTAGACGGAGCAAGACCTATGTTCGCTGGTCCCTACAACCGGT
AACGAAACAACGCAACATAACGTACCAGGTTGTGCTTCGCGACGGGAGGC
ACCTGGTGGGAGTGATGAGAAGCTACGACCAGTTCTCCAACATCGTCCTG
GAGGACACGCACGAGCGGCACTTTGTTGGGG GTGAGCTCAGGCTCGGGTT
GATCGTTCCTATCTCGTTTGTGTTGGCGTTGTGGGTACACTGCTGTGTAG
GCTGGCTAAGACAAAGCCTATCATGTTTGGAACGGCTACTCGTGTGTGTG
TATGACGGGATGATGGGTGATGGGACGAATCGGCGATACGCTTAACGAAA
ACGTTTGGCTCGCAAGGTGAAATATGCTACAGCAGTATTATGGTACTGGT
ACAGCACTTGCTGGTAGGCAAACTCAAGACGCACTCGCGATACTAATATA
GAAGTATGTTGATCGAAATTCTCGTCCCGCAGGTGTAAGACTATGGCAGT
TGCACCACTCGCCCTGTTTGTTGCAGTGTGGGGTAGATAGCGAGGGCGTT
CCGAGAGCACGGTGTGAGGCCCCTTCCCCATTCCCACAGTATAGAGAGCC
GCTTGAAGATCGATGTCAAATGCATCACCTCCGGGGACTGAGTTGCCCGC
CCGGCGCCTTATAGAACACCGATGGCAAACTTTTCAATCAAATTTTACGA
CACTTGTGCCGGAGTTTGCAATGTCGGGTGTTCGAATCCTCCACCCCTCA
GAACCAGACAAGTAGCAATGGCATTAGAGGAGATTGCTAGGACGAGGTGT
ATGCCCGCTGTGCAGCAGGGATGTCGCGCTTGCCTAAGGAGCACCTGCAC
GATTGATGATTGATATGTCGCACGTGTGTGCTTCTTCTTTCGTCTCCAAT
TTTTCATCTTTACCTCTAACTTATTCTGGTTTTGTCAACCTGGTGCGGTG
TGCTCCAGATATGTTCGGGGATATTGCGCTGGGGCTTTACCTGGTGCGAG
GGGACGCCCTCGTGCTCATGGGGGAACTGGACGCGGCCTTAGAGGAGACG
CCCAGGCTGAAGAAGGTCTCTGCCGACGAGATCATCGAGGCGCAGCAGGA
GGCCTCCGCGGAGGAGCGGCAGGACGCAAAGCTAGACTGGTTGTTCCAGG
ACTTGTCATGA TCGTGGTACATTTTTGGTTCCATCATGCGACGTAGTATT
TCTTCGTTTGGTTTTGCTTCGCGGGGCAGACCGGTAGATCTTTTGCTCAC
GGCCTAACTTTTTTGGGAAGCTCGGGGGATCTGCAGGAGTTTTTGGGGTG
TTCGGTAGTTTGATTGATGATTGATTCGTTTCTCGATATTTAACGGCTGA
TGCGTCTTTTCCTACATGTATGTCCTTCCAGCTCTGTGGCTGGTTTTCGC
TCAGGTCTTGTGACGGTTGCTCAGAAACTTGTCAACCCTTGAAGTCACAT
GCTAAAAATGTCTTATCGTTGGAAATATGCGTGGTTGGCCTCAATAATTG
GTATCTACTTGTAGGGCCGCCCAACGTTTTACGTTTTGCAGCTCGAGGAG
CTACTGCTGTACCCGCTGCTGTACCTACCGGTGAACGGTTAAGGCACCTC
TCCAGGCAATGTAGGAAGCGGTCGTGACAGGCGACAAGACGTAGGGGCAG
CAAACGGTTCGCTTGTCGAGCATATGTGAGGGCGCGTGAAGCGCAAAAGC
TGCGTTTTGATCGGGGTCGTTTGCTTGATTCAGGCTGGCGCGTTGGTTGG
TTCCCCCGTGGAAAGTCGAGATCGAAGGGCCATGTGCTGTTTGGTGTAGT
TGTGTTTTTTAACCGGGGCATTCATTCGTTGAATCAAACTTAGCCGTCTA
CTTATTAAAGGGCTACATGAAGAGTTCGGCGCGGCGATGATATGTAAACC
GCCAAAACAAAAGTCTGCCTTTCCGCCGGGCAAGGCGGACATAAATATGC
CAGAGTGCGA back to top Coding sequence (CDS) from alignment at C-linearis_contig97:211678..214437+
>mRNA_C-linearis_contig97.17075.1 ID=mRNA_C-linearis_contig97.17075.1|Name=mRNA_C-linearis_contig97.17075.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at C-linearis_contig97:211678..214437+ (Chordaria linearis ClinC8C monoicous) back to top