Homology
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI)
HSP 1 Score: 298 bits (764), Expect = 4.960e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY
Sbjct: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA)
HSP 1 Score: 265 bits (677), Expect = 6.020e-84
Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
M+YLL HL +GWAVDQAI+ EEER V +RFGHD+D TCMQMDEVL+GIAEDVKNF IYVVD+S+VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVVYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM)
HSP 1 Score: 264 bits (675), Expect = 1.200e-83
Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL G+AEDVKNF AIYVVD++EVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK EM+DI+E VYRGARKGRGLV++PKDYSTKY+Y
Sbjct: 1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSEMVDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA)
HSP 1 Score: 264 bits (674), Expect = 2.640e-83
Identity = 120/142 (84.51%), Postives = 134/142 (94.37%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHLR+GWAVDQAI+NEE +VV +RFGHD D TCM+MDE+L GIA+DVKNFC+IY+VD+SEVPDF MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 14 MSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 155
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA)
HSP 1 Score: 261 bits (668), Expect = 1.400e-82
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL+TGW+VDQAI+NEE+RVV RFGHD+D CMQMDEVL GI +DVKNF IYV+D+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQEMIDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 143
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI)
HSP 1 Score: 259 bits (663), Expect = 7.590e-82
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NEE+RVV +RFGHD D TCMQMDE+L IA+DVKNF IY VD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVV+RGARKGRGLV+SPKDYSTKY+Y
Sbjct: 1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVFRGARKGRGLVISPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA)
HSP 1 Score: 263 bits (671), Expect = 8.780e-82
Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL+G+AEDVKNF +YVVD+++VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 87 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 228
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA)
HSP 1 Score: 254 bits (648), Expect = 1.350e-79
Identity = 118/142 (83.10%), Postives = 131/142 (92.25%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYL+PHL TGWAVDQAI++EE+RVV LRFGHD+D TCMQMDEVL GIAE VKN+ IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA +KQEMIDI+E +YRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQEMIDIVETIYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A482V1I6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1I6_9ARCH)
HSP 1 Score: 253 bits (647), Expect = 1.900e-79
Identity = 115/142 (80.99%), Postives = 130/142 (91.55%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NEE +VV +RFGHD D TCM+MDEVL +AEDVKNF IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIM+D+GTGNNNKI+WA NNKQE+IDI+E VYRGA+KGRGLV+SPKDYSTKYKY
Sbjct: 1 MSYLLPHLHSGWAVDQAILNEENKVVVIRFGHDWDPTCMEMDEVLFHLAEDVKNFAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMVDMGTGNNNKINWALNNKQELIDIIETVYRGAKKGRGLVISPKDYSTKYKY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match:
A0A3R6ZPY4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZPY4_9STRA)
HSP 1 Score: 260 bits (665), Expect = 5.650e-79
Identity = 119/142 (83.80%), Postives = 132/142 (92.96%), Query Frame = 1
Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSY+LPHL TGWAVDQAI++E ERVV +RFGHDHD CMQMDEVL GIAEDVKNF +YVVD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNK+EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 225 MSYMLPHLCTGWAVDQAIMSEGERVVVMRFGHDHDPVCMQMDEVLCGIAEDVKNFAVVYVVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKKEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 366
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.96e-97 / Id = 100.00 Expect = 6.02e-84 / Id = 86.62 Expect = 1.20e-83 / Id = 83.80 Expect = 2.64e-83 / Id = 84.51 Expect = 1.40e-82 / Id = 84.51 Expect = 7.59e-82 / Id = 83.10 Expect = 8.78e-82 / Id = 83.80 Expect = 1.35e-79 / Id = 83.10 Expect = 1.90e-79 / Id = 80.99 Expect = 5.65e-79 / Id = 83.80 Sequence D7G4B1_ECTSI A0A835Z237_9STRA H3G9C0_PHYRM A0A7S3HQX3_9STRA A0A7S2HED9_9STRA A0A812WHX6_SYMMI A0A5D6XYK2_9STRA A0A0M0JAP0_9EUKA A0A482V1I6_9ARCH A0A3R6ZPY4_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 303.1
Seed ortholog evalue 6.7e-80
Seed eggNOG ortholog 2880.D7G4B1
Preferred name DIM1
KEGG ko ko:K12859
KEGG Pathway ko03040,map03040
KEGG Module M00354
Hectar predicted targeting category other localisation
GOs GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005681,GO:0005682,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031090,GO:0031965,GO:0031967,GO:0031975,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046540,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1990904
EggNOG free text desc. spliceosomal complex assembly
EggNOG OGs KOG3414@1,KOG3414@2759
Ec32 ortholog description Thioredoxin-like fold
Ec32 ortholog Ec-02_002020.1
COG Functional cat. S
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko03041
Exons 3
Model size 1537
Cds size 429
Stop 1
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930826.1078026-CDS-C-linearis_contig96:497045..497240 1622930826.1078026-CDS-C-linearis_contig96:497045..497240 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 497046..497240 +
1690881269.8341804-CDS-C-linearis_contig96:497045..497240 1690881269.8341804-CDS-C-linearis_contig96:497045..497240 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 497046..497240 +
1622930826.1206403-CDS-C-linearis_contig96:498141..498279 1622930826.1206403-CDS-C-linearis_contig96:498141..498279 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 498142..498279 +
1690881269.8504415-CDS-C-linearis_contig96:498141..498279 1690881269.8504415-CDS-C-linearis_contig96:498141..498279 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 498142..498279 +
1622930826.1325026-CDS-C-linearis_contig96:498879..498975 1622930826.1325026-CDS-C-linearis_contig96:498879..498975 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 498880..498975 +
1690881269.8621001-CDS-C-linearis_contig96:498879..498975 1690881269.8621001-CDS-C-linearis_contig96:498879..498975 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 498880..498975 +
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930826.1456625-UTR-C-linearis_contig96:498975..500083 1622930826.1456625-UTR-C-linearis_contig96:498975..500083 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 498976..500083 +
1690881269.8770578-UTR-C-linearis_contig96:498975..500083 1690881269.8770578-UTR-C-linearis_contig96:498975..500083 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 498976..500083 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17048.1
>prot_C-linearis_contig96.17048.1 ID=prot_C-linearis_contig96.17048.1|Name=mRNA_C-linearis_contig96.17048.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=143bp
MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAE DVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNN KISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY* back to top mRNA from alignment at C-linearis_contig96:497046..500083+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17048.1 ID=mRNA_C-linearis_contig96.17048.1|Name=mRNA_C-linearis_contig96.17048.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3038bp|location=Sequence derived from alignment at C-linearis_contig96:497046..500083+ (Chordaria linearis ClinC8C monoicous)ATGTCGTATCTTCTGCCGCACTTGAGAACGGGGTGGGCCGTGGACCAGGC
CATCATCAACGAGGAGGAGAGAGTGGTGTGCCTGAGGTTCGGGCACGACC
ACGACGTGACCTGCATGCAGATGGACGAAGTTCTGGCGGGAATCGCTGAG
GATGTCAAGAACTTTTGTGCCATCTACGTTGTTGACGTTTCCGAG GTTCG
TTTTTCGAGAGAGTTGCTCGCTCGGAAAAGAACGGCGGCTTAAAATGAGG
TGGTGGCACTGCTGCTGAGTGCCACCCTGTGACGGGAGATCATGGGAGGG
TAGGACGTCCAATCGATGTACACCAGGGTTGTCTCATTGTCCGTGTTTTG
TTATTTTTGTTGCACCACTGCCCGTCTACAGCAGTCGGTAGGTGATGACG
TTGTATAACACCCACCCAGGGAGCCGCCGTCCTGGTTGCTACATACGGGG
TAGACATGAAGCTTCATTTATCGCAAGGACCTAATCCATGCCTGTCTAGC
GGCAGCGTTAGACACAGATTTTGATTCGTTTGTTTAGGAAGTTTCTGGGG
CACGTGCCGTCGCACTGAAGTTGGACGCGTGCTTGTATTTGCCGACAACC
GTGGCCCGCGCACAGCATAGGTGAGTAGACTATGTCTTCGCCGCTGTGTG
ATGTGTAATTACCACCGCGGCACTACTCTCTTCCCGCTTGCAGCACCCTT
CCATCGTGGTTGGCTTTTTTGGACTGTCCTTCGAAATCGAACTACTTTGC
AGGCGATGGGCTTGTTGTGTGTTTGTTGTCCGTAATGTCATTTAGCTTTA
TCATCATCGTCACCGGCTGCTGCGGGCACACGCCATGATGAAGTGTCACA
CTGCTGTGTGTTTCCAGCCTGCCGGACAGCAGAAAAAGCAAGATTTCTTT
TGGTGATAAGGTAAGGTTGTACGGTTAGATAAAACCGACTTTTGGGTGTG
TAGCCGTGCACCCAGCCCCACTCTCATCTTAAAACCCCCTCCGCGTATAC
CTAATTACCTTGTGCCTGGCTCACTCGGTCGCCCATTTTCCTGCTCGTTT
TGTTTTGTGTCGCCCCTTGCTGTGTTGCATTTTCTCCTCTGCTCAGGTGC
CGGATTTTAACGACATGTACGAGCTGTACGACCCTTGCACCGTCATGTTC
TTCTTCCGCAACAAGCACATCATGATAGACCTCGGCACCGGAAACAACAA
CAAGATCTCGTGGGCGTTCAACAACAAACAGGAG GTGCGTGGCGTGGCGT
GCGTGGTCGAGTGAAGTCAAGTTCGACAATTTTGCTCTGGTTTGTGTTGT
CCCATTCACTCACCAATCACGCTCGCTTGCCAACCATGTCCTTATATAGC
TCCGGGGAAGACAATTCGGGGCTTACAGTGCATCAACCCCTCCTGGCGTT
GTTGTGCAGACATGCGTGTGGAGAGCAGGCCCAGGGGTGGTATAGTTGTG
TTCACGGTGCTTGTATGAGTTCTGTGCCGTGGCCCGCTCGTGCGTGGTAC
TCCGAACAAGGCATGTATCTACGCCTCTGCGCTCAAGCTTCCGTCGAGCA
GGTTTTCTCCGACGCACAAAAGCAGCTGTGCCACTTTTTGCTAAACGAAG
GAAGACCTTGGGCGTCGTTTCGACCTTTTCTAGCCAACAAATGGCCATGA
TTTCATGATTTCCATATGCTGCTGCTGTGGTATAGGCTTGGGTGCACTCC
CATCAAGTTTGCTCCACAGTCAGTTACCGCCGTCGGTGGAAGCGCTCTGT
CTTACACGACACTAGAAAAGCTGTTGTTTGAAACCCGGCTCCGACTAACC
CGTCCAACTTTACGCCACCCCCACCCCCTCGCAGATGATCGATATCATGG
AGGTTGTATACAGAGGAGCTCGGAAGGGACGAGGTCTCGTCGTGTCGCCG
AAGGACTACTCCACCAAGTACAAGTACTAG ACAGGGCGGCGTGTTTTCTT
CTTCGCCTTTCGCCGCTACAGTGTTGCTCAAAATGGACGCGAATAGCAGG
GGGGGGTGTCTTCGACTCTACCCCCTCGCTCGCCATTGATGGGGGAGGGT
GGGGACGGTGGCGATGTTTTTGATGCCATGTGCTTGAGGTACCTGAAAAT
GGACAATGGAACAGGTCTCTGACCTTTTTCTTCCGGGCCTTTTTTGTTCT
GTCTTACCTTTGTCGGGTGTTTGTGCTTTGGGGTGTCGGGGGGATGTATA
GGCAGCTCTCGTTATGTTCATAGAGATTCGCGAGAGCATGTGCTAAGTAG
GTACACGTCGTCTTATCATGCAGGTAGGGTTTTAGTGTTGTTGTTGCGGG
CGTGGGTGACCTCCCGTCCCGCGCAATTTCGTACTTTCCTGCGTTCAACC
TGTTCCCGCTACAAGGTAGTTTAGGGAACTTGGAGCACGTTGGGAATTTT
ACCAGGGCCCAGCAACGGCGCTGGTCGGCGGGCGCCAAATGAGGTGTCCA
AAATAAGTAAATAAAAAGTGTAATTGTCTGGTATGGCGCAGGACGGGTTT
TTGTGTGGAAAATTCGCATGCAGGCCACAGGGGCGGGCTGCCCTCAACCT
AGCGCGCACGCAGGCAGGCCCGAGCGCGCAGAGCGACAACCGCGATCTGC
TGGGTGCCCGTGCGTGTGTACCCGTGTGTTTGCCTTGCCGTGGGGCGTTC
GGCTTGCGGCATGGCTGCGTTTGGTCTGGGCGAATGCGGTGTGCGCCGTG
AGAGTTCGATGCCCGAACGGCGAAATAGGCCGGTCGACATTATGGTTTAT
ATGAGGGGTTGAGCGCAAGCCTTTGGCGACAAGCACATGGCACGATGTTG
CTTTTTCTCCTGTGATCTGCCCCCTCCAGGGTGAACCTGGTCGGCTTGCT
CTGCCTACCGATACTACTTACTTGTACGGCTTGTGTTTTCTCACGTCTGG
GTTTGATTGGCGTTGCGTTCGTTGTGGCGTTGGTACTTGAGCACCTTTTC
TTCCTGAAGTTTCTGCTTCACAACTACAGCAACGCTATGGCTCTTTAATT
TGGTTTCAAGCCTCTTGGGCAGCACCTCGCTCAACACA back to top Coding sequence (CDS) from alignment at C-linearis_contig96:497046..500083+
>mRNA_C-linearis_contig96.17048.1 ID=mRNA_C-linearis_contig96.17048.1|Name=mRNA_C-linearis_contig96.17048.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at C-linearis_contig96:497046..500083+ (Chordaria linearis ClinC8C monoicous) ATGTCGTATCTTCTGCCGCACTTGAGAACGGGGTGGGCCGTGGACCAGGC CATCATCAACGAGGAGGAGAGAGTGGTGTGCCTGAGGTTCGGGCACGACC ACGACGTGACCTGCATGCAGATGGACGAAGTTCTGGCGGGAATCGCTGAG GATGTCAAGAACTTTTGTGCCATCTACGTTGTTGACGTTTCCGAGATGTC GTATCTTCTGCCGCACTTGAGAACGGGGTGGGCCGTGGACCAGGCCATCA TCAACGAGGAGGAGAGAGTGGTGTGCCTGAGGTTCGGGCACGACCACGAC GTGACCTGCATGCAGATGGACGAAGTTCTGGCGGGAATCGCTGAGGATGT CAAGAACTTTTGTGCCATCTACGTTGTTGACGTTTCCGAGGTGCCGGATT TTAACGACATGTACGAGCTGTACGACCCTTGCACCGTCATGTTCTTCTTC CGCAACAAGCACATCATGATAGACCTCGGCACCGGAAACAACAACAAGAT CTCGTGGGCGTTCAACAACAAACAGGAGGTGCCGGATTTTAACGACATGT ACGAGCTGTACGACCCTTGCACCGTCATGTTCTTCTTCCGCAACAAGCAC ATCATGATAGACCTCGGCACCGGAAACAACAACAAGATCTCGTGGGCGTT CAACAACAAACAGGAGATGATCGATATCATGGAGGTTGTATACAGAGGAG CTCGGAAGGGACGAGGTCTCGTCGTGTCGCCGAAGGACTACTCCACCAAG TACAAGTACTAGATGATCGATATCATGGAGGTTGTATACAGAGGAGCTCG GAAGGGACGAGGTCTCGTCGTGTCGCCGAAGGACTACTCCACCAAGTACA AGTACTAG back to top