mRNA_C-linearis_contig96.17048.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 4.960e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY
Sbjct:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA)

HSP 1 Score: 265 bits (677), Expect = 6.020e-84
Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            M+YLL HL +GWAVDQAI+ EEER V +RFGHD+D TCMQMDEVL+GIAEDVKNF  IYVVD+S+VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVVYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVYRGARKGRGLVVSPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM)

HSP 1 Score: 264 bits (675), Expect = 1.200e-83
Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL G+AEDVKNF AIYVVD++EVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK EM+DI+E VYRGARKGRGLV++PKDYSTKY+Y
Sbjct:    1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSEMVDIIETVYRGARKGRGLVIAPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.640e-83
Identity = 120/142 (84.51%), Postives = 134/142 (94.37%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYLLPHLR+GWAVDQAI+NEE +VV +RFGHD D TCM+MDE+L GIA+DVKNFC+IY+VD+SEVPDF  MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:   14 MSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 155

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.400e-82
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYLLPHL+TGW+VDQAI+NEE+RVV  RFGHD+D  CMQMDEVL GI +DVKNF  IYV+D+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQEMIDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 143

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI)

HSP 1 Score: 259 bits (663), Expect = 7.590e-82
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYLLPHL +GWAVDQAI+NEE+RVV +RFGHD D TCMQMDE+L  IA+DVKNF  IY VD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVV+RGARKGRGLV+SPKDYSTKY+Y
Sbjct:    1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVFRGARKGRGLVISPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA)

HSP 1 Score: 263 bits (671), Expect = 8.780e-82
Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL+G+AEDVKNF  +YVVD+++VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:   87 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 228

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA)

HSP 1 Score: 254 bits (648), Expect = 1.350e-79
Identity = 118/142 (83.10%), Postives = 131/142 (92.25%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYL+PHL TGWAVDQAI++EE+RVV LRFGHD+D TCMQMDEVL GIAE VKN+  IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA  +KQEMIDI+E +YRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQEMIDIVETIYRGARKGRGLVVSPKDYSTKYRY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A482V1I6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1I6_9ARCH)

HSP 1 Score: 253 bits (647), Expect = 1.900e-79
Identity = 115/142 (80.99%), Postives = 130/142 (91.55%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSYLLPHL +GWAVDQAI+NEE +VV +RFGHD D TCM+MDEVL  +AEDVKNF  IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIM+D+GTGNNNKI+WA NNKQE+IDI+E VYRGA+KGRGLV+SPKDYSTKYKY
Sbjct:    1 MSYLLPHLHSGWAVDQAILNEENKVVVIRFGHDWDPTCMEMDEVLFHLAEDVKNFAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMVDMGTGNNNKINWALNNKQELIDIIETVYRGAKKGRGLVISPKDYSTKYKY 142

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BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A3R6ZPY4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZPY4_9STRA)

HSP 1 Score: 260 bits (665), Expect = 5.650e-79
Identity = 119/142 (83.80%), Postives = 132/142 (92.96%), Query Frame = 1

Query:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
            MSY+LPHL TGWAVDQAI++E ERVV +RFGHDHD  CMQMDEVL GIAEDVKNF  +YVVD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNK+EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:  225 MSYMLPHLCTGWAVDQAIMSEGERVVVMRFGHDHDPVCMQMDEVLCGIAEDVKNFAVVYVVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKKEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 366

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot

BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D7G4B1_ECTSI	4.960e-97	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z237_9STRA	6.020e-84	86.62	Mitosis protein DIM1-domain-containing protein n=1...	[more]
H3G9C0_PHYRM	1.200e-83	83.80	Uncharacterized protein n=32 Tax=Oomycota TaxID=47...	[more]
A0A7S3HQX3_9STRA	2.640e-83	84.51	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S2HED9_9STRA	1.400e-82	84.51	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A812WHX6_SYMMI	7.590e-82	83.10	YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A81...	[more]
A0A5D6XYK2_9STRA	8.780e-82	83.80	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A0M0JAP0_9EUKA	1.350e-79	83.10	Thioredoxin-like protein 4a n=2 Tax=Prymnesiales T...	[more]
A0A482V1I6_9ARCH	1.900e-79	80.99	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A3R6ZPY4_9STRA	5.650e-79	83.80	Uncharacterized protein n=2 Tax=Aphanomyces invada...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	303.1
Seed ortholog evalue	6.7e-80
Seed eggNOG ortholog	2880.D7G4B1
Preferred name	DIM1
KEGG ko	ko:K12859
KEGG Pathway	ko03040,map03040
KEGG Module	M00354
Hectar predicted targeting category	other localisation
GOs	GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005681,GO:0005682,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031090,GO:0031965,GO:0031967,GO:0031975,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046540,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1990904
EggNOG free text desc.	spliceosomal complex assembly
EggNOG OGs	KOG3414@1,KOG3414@2759
Ec32 ortholog description	Thioredoxin-like fold
Ec32 ortholog	Ec-02_002020.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03041
Exons	3
Model size	1537
Cds size	429
Stop	1
Start	1