mRNA_C-linearis_contig96.17048.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI) HSP 1 Score: 298 bits (764), Expect = 4.960e-97 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY
Sbjct: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA) HSP 1 Score: 265 bits (677), Expect = 6.020e-84 Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
M+YLL HL +GWAVDQAI+ EEER V +RFGHD+D TCMQMDEVL+GIAEDVKNF IYVVD+S+VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVVYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM) HSP 1 Score: 264 bits (675), Expect = 1.200e-83 Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL G+AEDVKNF AIYVVD++EVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK EM+DI+E VYRGARKGRGLV++PKDYSTKY+Y
Sbjct: 1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSEMVDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.640e-83 Identity = 120/142 (84.51%), Postives = 134/142 (94.37%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHLR+GWAVDQAI+NEE +VV +RFGHD D TCM+MDE+L GIA+DVKNFC+IY+VD+SEVPDF MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 14 MSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 155
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA) HSP 1 Score: 261 bits (668), Expect = 1.400e-82 Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL+TGW+VDQAI+NEE+RVV RFGHD+D CMQMDEVL GI +DVKNF IYV+D+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQEMIDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 143
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI) HSP 1 Score: 259 bits (663), Expect = 7.590e-82 Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NEE+RVV +RFGHD D TCMQMDE+L IA+DVKNF IY VD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQEMIDI+EVV+RGARKGRGLV+SPKDYSTKY+Y
Sbjct: 1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQEMIDIIEVVFRGARKGRGLVISPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA) HSP 1 Score: 263 bits (671), Expect = 8.780e-82 Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NE +RVV +RFGHDHD TCMQMDEVL+G+AEDVKNF +YVVD+++VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 87 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 228
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA) HSP 1 Score: 254 bits (648), Expect = 1.350e-79 Identity = 118/142 (83.10%), Postives = 131/142 (92.25%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYL+PHL TGWAVDQAI++EE+RVV LRFGHD+D TCMQMDEVL GIAE VKN+ IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA +KQEMIDI+E +YRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQEMIDIVETIYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A482V1I6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1I6_9ARCH) HSP 1 Score: 253 bits (647), Expect = 1.900e-79 Identity = 115/142 (80.99%), Postives = 130/142 (91.55%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSYLLPHL +GWAVDQAI+NEE +VV +RFGHD D TCM+MDEVL +AEDVKNF IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIM+D+GTGNNNKI+WA NNKQE+IDI+E VYRGA+KGRGLV+SPKDYSTKYKY
Sbjct: 1 MSYLLPHLHSGWAVDQAILNEENKVVVIRFGHDWDPTCMEMDEVLFHLAEDVKNFAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMVDMGTGNNNKINWALNNKQELIDIIETVYRGAKKGRGLVISPKDYSTKYKY 142
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Match: A0A3R6ZPY4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZPY4_9STRA) HSP 1 Score: 260 bits (665), Expect = 5.650e-79 Identity = 119/142 (83.80%), Postives = 132/142 (92.96%), Query Frame = 1 Query: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 426
MSY+LPHL TGWAVDQAI++E ERVV +RFGHDHD CMQMDEVL GIAEDVKNF +YVVD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNK+EMIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 225 MSYMLPHLCTGWAVDQAIMSEGERVVVMRFGHDHDPVCMQMDEVLCGIAEDVKNFAVVYVVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKKEMIDIIETVYRGARKGRGLVISPKDYSTKYRY 366 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17048.1 >prot_C-linearis_contig96.17048.1 ID=prot_C-linearis_contig96.17048.1|Name=mRNA_C-linearis_contig96.17048.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=143bp MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEback to top mRNA from alignment at C-linearis_contig96:497046..500083+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig96.17048.1 ID=mRNA_C-linearis_contig96.17048.1|Name=mRNA_C-linearis_contig96.17048.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3038bp|location=Sequence derived from alignment at C-linearis_contig96:497046..500083+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig96:497046..500083+ >mRNA_C-linearis_contig96.17048.1 ID=mRNA_C-linearis_contig96.17048.1|Name=mRNA_C-linearis_contig96.17048.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at C-linearis_contig96:497046..500083+ (Chordaria linearis ClinC8C monoicous)back to top |