mRNA_C-linearis_contig105.936.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig105.936.1

>prot_C-linearis_contig105.936.1 ID=prot_C-linearis_contig105.936.1|Name=mRNA_C-linearis_contig105.936.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=433bp
MMPSKCAHPGCTTCPSYGVREGTKKKANYVCSMPARKGMVDVISRKCGHH
GCIKRARYGMEVTKKAVLCFLHARAGMMDVVTKRCEHQGCNKRASHGTEG
KKAKLCSQHATEGMANVLSKRCGHQGCNKSPLFGVRGTTTPELCQQHAEE
GMVNVKYKRCGHRGCSKGASHGVEGTKKAELCLQHAKEGMVNIAKETCGH
QGCGRIPSYGVEGSKAEFCSQHAREGMVNVVGMRCGHPGCNKIPSYGMEG
TRKVEVCSHHATERMVNVKSRRCGHEGCTTGPSYGVDGTKKAEFCAQHAR
EGMVDVISKRCDHGGCTKQPSYGVEGAKTAKFFSQHAKKGVVGVKSKRCG
HQGCTKQPSYGVEGTKKTELFSQHAREGMVDVRNKRCGHLGCNQPVSIVR
NERYQEEGDLHPTRQGGYGVPESEVGPQRGWR*
back to top

mRNA from alignment at C-linearis_contig105:115549..119152-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig105.936.1 ID=mRNA_C-linearis_contig105.936.1|Name=mRNA_C-linearis_contig105.936.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3604bp|location=Sequence derived from alignment at C-linearis_contig105:115549..119152- (Chordaria linearis ClinC8C monoicous)
CCCCTATTGACAATCAAACTGCAGAGGCAGGCCCGCCAGAAAAGAAGGGA
AATGATGCCCAGTAAATGCGCCCACCCAGGGTGCACCACGTGTCCGTCGT
ACGGCGTGAGGGAGGGTACGAAGAAGAAAGCTAATTATGTTTGCAGCATG
CCAGCCAGGAAGGGAATGGTGGACGTGATCAGCAGGAAGTGTGGTCACCA
TGGCTGCATCAAACGTGCGAGATATGGTATGGAGGTAACCAAGAAGGCTG
TATTATGTTTTCTGCACGCCAGGGCGGGAATGATGGACGTCGTCACGAAG
AGGTGTGAGCATCAAGGGTGCAACAAGCGAGCATCACACGGCACGGAAGG
CAAGAAAGCCAAGCTCTGCTCTCAGCACGCCACGGAGGGAATGGCGAACG
TCCTTAGCAAGAGATGCGGGCATCAAGGGTGCAACAAGAGTCCATTGTTC
GGCGTGCGAGGAACGACCACGCCCGAGCTCTGCCAACAGCACGCTGAGGA
GGGAATGGTGAATGTGAAGTACAAGCGATGTGGCCACCGTGGCTGCTCCA
AGGGTGCCTCGCACGGCGTGGAAGGTACCAAGAAGGCAGAGCTCTGCCTA
CAGCATGCGAAGGAGGGCATGGTGAACATCGCCAAGGAGACGTGTGGCCA
CCAAGGGTGCGGCAGAATCCCGTCGTACGGCGTTGAAGGAAGCAAGGCTG
AATTCTGCTCTCAGCACGCTAGGGAAGGAATGGTAAACGTGGTCGGCATG
AGGTGTGGGCATCCAGGGTGCAATAAGATTCCGTCGTACGGCATGGAAGG
TACCAGGAAGGTTGAGGTCTGCTCTCATCACGCCACAGAGAGAATGGTGA
ACGTAAAAAGCAGGAGGTGCGGGCACGAAGGGTGCACCACGGGTCCGTCG
TACGGCGTGGATGGCACCAAGAAAGCTGAGTTCTGCGCCCAGCATGCTAG
GGAGGGAATGGTGGACGTGATCAGCAAGAGGTGTGACCATGGAGGGTGCA
CTAAGCAGCCGTCGTACGGCGTAGAAGGTGCAAAGACGGCCAAATTCTTC
TCTCAGCACGCGAAGAAGGGGGTGGTTGGCGTGAAGAGCAAGAGGTGTGG
CCATCAAGGGTGCACTAAACAACCGTCGTACGGCGTGGAAGGTACCAAGA
AGACTGAACTCTTCTCCCAGCATGCCAGGGAGGGAATGGTGGACGTGCGT
AACAAGAGGTGTGGGCACCTAGGGTGCAACCAACCAGTGTCCATCGTACG
GAATGAAAGGTACCAAGAAGAGGGAGACCTGCATCCTACACGCCAAGGCG
GGTACGGTGTCCCTGAGAGTGAAGTCGGCCCGCAGCGCGGGTGGAGGTGA
TGGAAGCGGTGGGCGTGAGCGCTTGCATGGCGAGACTGATGTGGATGCCT
CCGTCCGCCGATCGGCGACGAAGAAACGATCGCTACAGGCTGACGCTGAT
CCTCTGATGCCCGTCGCTGTCAAGACAGAGCAAAAACGTGACGAAGGGAT
GGGGAGTCACAACCACACGGAACGACAAGCGAGCCCGCCGGATCGGATTC
ACCCCGTCGGTCCCAGCGGCAGTCAAAGCAGAGGCTATACGGAAAAGGGC
GGCCATCCATGCGACGAACTTGTCCTCGGAGTCAGAGCCGGAGGTGGAAC
CGGAGGCCGGAGTGGCCGTTTCGACCTAGACAAGGTGCGAAAGCCAGGTG
GCTGAAGGTGCGAAGGAGCGCTTGCAACACGTGCTCTTCGGTACTTCTCA
GTATTTAGTTGTATTTTTGGCCTTCCAATGGATACTTTCCCATTTCCCCA
TCCCACTTGCTATCGTCGTATGTGATGGGCAGTACACGATTCACCACTCA
CTGTGTAGTACTTTCGGCATATCTTTGGAACTCTAGTTGGTTTGTTGGTG
TTCGTTTAAGCGAAAGTGGTCTATAATAACAGGTAGCGTCCGTCCAATCT
CCAGGTGTCGCTATTCTTTGATTTTGTCGCGTTTTCTCGCACACGTCACC
AGAGCATCGTTGCCGCTCTCCGTCTCGGTCCATACGGACGTCATTTAGAA
GATAAATGCTGCGCTTTCTTCGTGTTGCCCCAATAGTCCAAGTAGCTTCA
CTGCCGCACTCCTTTTTCTTTCGGTGTTGCTGCCGCCGCCGCTACGACAC
GACGCTGTTTGCGCGCACTCTAAAGCACCCAGGCTGGACATTTCCTTTTC
TTTGTGCACGGTTCAACGATTGGTTGTCGGCGGGGCTTCGTTGTGCTAAA
TTACCACCTCTGGCTTTAATATTTGTGCCCCAGAGCGCGTCAACCTGCCG
TTGAGTGTTGTTGTTGTGGGACGATGGTTTCAAACTCGAGCATGGCCAAA
CTTTCCGGGGCTCACGCTACGCGTATTTTTTCGCACGCTGTCTGGGCAAG
GGGCGCGAAGCTACTCTGTGAAGCGCATAGAAGTACTATGCAACTCTCCC
GGTGTACAGGGCTTCTACTCATCCACACATGCGTGTATGCCATCGTTTCA
GCCGTTGACTTGCCGGAAAACATAGGCTTGAACGACACTCGGTGTAATAC
GGTTTGATGATGAAACGCGCCAAAAGAACAATCCTCTTCGTTTTGCCTCC
GGAATCGGAACCGTCGGGGCCGAACTTCCGCATTTGAAACGATTTGGACT
TGCTTTTTTGTGGTGGGGGTGTGGGCAACTCCAGCCGGAGGGGCGACCTT
GTCCTCAGTTCCATGTTCAACTACGCACCGGATATCGCTAACCCATCCGC
CCCAACCGATTGTTTGCTCTTGCCATTGCTGCTCTCAACCAGATGATATG
GAGTGAAGAGGAAACCCGACTGTCACGATGTGTGTTGCCCTCTTCTTCTC
TTCTTGCGACAGCTTCCTGCCTTGCCATGTTGTTGTGTGAGCGACACCTT
AGTTTTTCCGTTTGCCGCTTCGCAGAAAAGTGGCTTGTGACCCAATAGGA
TACATGAGATCATCGTTATTTTTGTTGTTTTCATAGGCATGAACGAGTTA
TGTTCGCTTGTTCTCCGTGCTACATTATCGGCGCACCCGCGGTGGTGTTG
GAGGGAAGAGGCACGCGAGGATTGGTGGGGCAGTGAGAGGGTAGAGACGT
GTAGTAGGTGGTCGGCGTTTCTTGATCCCGGTGAAGTTGCGGAAACTTAC
GTGCTTGCATACACAGGATGTGCGAAATGGTTATCTCTTCGAATCTTCTC
GCGAGCGCAAGGATAGCTAGGCTTCGCCATTGTTCTTACGTACCAGGTAC
CTGGTGGCATTTGTCGTGTTTTTTTTCTTGTGCTGGTGTTGCTTGGTCCT
TGGGTCGCCAGTCAAAGCCTTCATTTTGTTGTCCCGTTTCCCGGTTTCAA
CCTGTTCCGTGAGCTTTCTGTTTTTGTTGTTGTACTTGTTGGTTTTCGAT
GTTGTTTGCATTGTGGTGTGGGGAGGTGGTGCTACGCGCTGCATCTAGAG
GATTGTTGTTTGGAAGAATGTTGGCGATGGAGTATGTGACCGTTGACAAT
TGCTTTCTTCCATGTTTGGACCAGTTGGTTGATGGGCGACTTCGAAGTGG
GGACGGGTCTGTTGTTGCGCATAATTTTATCGATGCAACAAGCAAGTTCG
CACC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig105:115549..119152-

>mRNA_C-linearis_contig105.936.1 ID=mRNA_C-linearis_contig105.936.1|Name=mRNA_C-linearis_contig105.936.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at C-linearis_contig105:115549..119152- (Chordaria linearis ClinC8C monoicous)
ATGATGCCCAGTAAATGCGCCCACCCAGGGTGCACCACGTGTCCGTCGTA
CGGCGTGAGGGAGGGTACGAAGAAGAAAGCTAATTATGTTTGCAGCATGC
CAGCCAGGAAGGGAATGGTGGACGTGATCAGCAGGAAGTGTGGTCACCAT
GGCTGCATCAAACGTGCGAGATATGGTATGGAGGTAACCAAGAAGGCTGT
ATTATGTTTTCTGCACGCCAGGGCGGGAATGATGGACGTCGTCACGAAGA
GGTGTGAGCATCAAGGGTGCAACAAGCGAGCATCACACGGCACGGAAGGC
AAGAAAGCCAAGCTCTGCTCTCAGCACGCCACGGAGGGAATGGCGAACGT
CCTTAGCAAGAGATGCGGGCATCAAGGGTGCAACAAGAGTCCATTGTTCG
GCGTGCGAGGAACGACCACGCCCGAGCTCTGCCAACAGCACGCTGAGGAG
GGAATGGTGAATGTGAAGTACAAGCGATGTGGCCACCGTGGCTGCTCCAA
GGGTGCCTCGCACGGCGTGGAAGGTACCAAGAAGGCAGAGCTCTGCCTAC
AGCATGCGAAGGAGGGCATGGTGAACATCGCCAAGGAGACGTGTGGCCAC
CAAGGGTGCGGCAGAATCCCGTCGTACGGCGTTGAAGGAAGCAAGGCTGA
ATTCTGCTCTCAGCACGCTAGGGAAGGAATGGTAAACGTGGTCGGCATGA
GGTGTGGGCATCCAGGGTGCAATAAGATTCCGTCGTACGGCATGGAAGGT
ACCAGGAAGGTTGAGGTCTGCTCTCATCACGCCACAGAGAGAATGGTGAA
CGTAAAAAGCAGGAGGTGCGGGCACGAAGGGTGCACCACGGGTCCGTCGT
ACGGCGTGGATGGCACCAAGAAAGCTGAGTTCTGCGCCCAGCATGCTAGG
GAGGGAATGGTGGACGTGATCAGCAAGAGGTGTGACCATGGAGGGTGCAC
TAAGCAGCCGTCGTACGGCGTAGAAGGTGCAAAGACGGCCAAATTCTTCT
CTCAGCACGCGAAGAAGGGGGTGGTTGGCGTGAAGAGCAAGAGGTGTGGC
CATCAAGGGTGCACTAAACAACCGTCGTACGGCGTGGAAGGTACCAAGAA
GACTGAACTCTTCTCCCAGCATGCCAGGGAGGGAATGGTGGACGTGCGTA
ACAAGAGGTGTGGGCACCTAGGGTGCAACCAACCAGTGTCCATCGTACGG
AATGAAAGGTACCAAGAAGAGGGAGACCTGCATCCTACACGCCAAGGCGG
GTACGGTGTCCCTGAGAGTGAAGTCGGCCCGCAGCGCGGGTGGAGGTGAA
TGATGCCCAGTAAATGCGCCCACCCAGGGTGCACCACGTGTCCGTCGTAC
GGCGTGAGGGAGGGTACGAAGAAGAAAGCTAATTATGTTTGCAGCATGCC
AGCCAGGAAGGGAATGGTGGACGTGATCAGCAGGAAGTGTGGTCACCATG
GCTGCATCAAACGTGCGAGATATGGTATGGAGGTAACCAAGAAGGCTGTA
TTATGTTTTCTGCACGCCAGGGCGGGAATGATGGACGTCGTCACGAAGAG
GTGTGAGCATCAAGGGTGCAACAAGCGAGCATCACACGGCACGGAAGGCA
AGAAAGCCAAGCTCTGCTCTCAGCACGCCACGGAGGGAATGGCGAACGTC
CTTAGCAAGAGATGCGGGCATCAAGGGTGCAACAAGAGTCCATTGTTCGG
CGTGCGAGGAACGACCACGCCCGAGCTCTGCCAACAGCACGCTGAGGAGG
GAATGGTGAATGTGAAGTACAAGCGATGTGGCCACCGTGGCTGCTCCAAG
GGTGCCTCGCACGGCGTGGAAGGTACCAAGAAGGCAGAGCTCTGCCTACA
GCATGCGAAGGAGGGCATGGTGAACATCGCCAAGGAGACGTGTGGCCACC
AAGGGTGCGGCAGAATCCCGTCGTACGGCGTTGAAGGAAGCAAGGCTGAA
TTCTGCTCTCAGCACGCTAGGGAAGGAATGGTAAACGTGGTCGGCATGAG
GTGTGGGCATCCAGGGTGCAATAAGATTCCGTCGTACGGCATGGAAGGTA
CCAGGAAGGTTGAGGTCTGCTCTCATCACGCCACAGAGAGAATGGTGAAC
GTAAAAAGCAGGAGGTGCGGGCACGAAGGGTGCACCACGGGTCCGTCGTA
CGGCGTGGATGGCACCAAGAAAGCTGAGTTCTGCGCCCAGCATGCTAGGG
AGGGAATGGTGGACGTGATCAGCAAGAGGTGTGACCATGGAGGGTGCACT
AAGCAGCCGTCGTACGGCGTAGAAGGTGCAAAGACGGCCAAATTCTTCTC
TCAGCACGCGAAGAAGGGGGTGGTTGGCGTGAAGAGCAAGAGGTGTGGCC
ATCAAGGGTGCACTAAACAACCGTCGTACGGCGTGGAAGGTACCAAGAAG
ACTGAACTCTTCTCCCAGCATGCCAGGGAGGGAATGGTGGACGTGCGTAA
CAAGAGGTGTGGGCACCTAGGGTGCAACCAACCAGTGTCCATCGTACGGA
ATGAAAGGTACCAAGAAGAGGGAGACCTGCATCCTACACGCCAAGGCGGG
TACGGTGTCCCTGAGAGTGAAGTCGGCCCGCAGCGCGGGTGGAGGTGA
back to top