Homology
BLAST of mRNA_C-linearis_contig105.936.1 vs. uniprot
Match:
A0A6H5J913_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J913_9PHAE)
HSP 1 Score: 60.1 bits (144), Expect = 4.200e-6
Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query: 6 CAHPGCTTCPSYGVREGTKKKANYVCSMPARKGMVDVISRKCGHHGCIKRARYGMEVTKK 65
C P CTT PSYG R KKA + C A++GM++V++RKC H GCIK A +G + K
Sbjct: 228 CQEPECTTWPSYGAR---LKKAEF-CKRHAKQGMINVVTRKCSHPGCIKSASFGKHGSSK 283
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.936.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
50 100 150 200 250 300 350 400 Expect = 4.20e-6 / Id = 48.33 Sequence A0A6H5J913_9PHAE
Match Name E-value Identity Description
A0A6H5J913_9PHAE 4.200e-6 48.33 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig105.936.1 ID=prot_C-linearis_contig105.936.1|Name=mRNA_C-linearis_contig105.936.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=433bp MMPSKCAHPGCTTCPSYGVREGTKKKANYVCSMPARKGMVDVISRKCGHH GCIKRARYGMEVTKKAVLCFLHARAGMMDVVTKRCEHQGCNKRASHGTEG KKAKLCSQHATEGMANVLSKRCGHQGCNKSPLFGVRGTTTPELCQQHAEE GMVNVKYKRCGHRGCSKGASHGVEGTKKAELCLQHAKEGMVNIAKETCGH QGCGRIPSYGVEGSKAEFCSQHAREGMVNVVGMRCGHPGCNKIPSYGMEG TRKVEVCSHHATERMVNVKSRRCGHEGCTTGPSYGVDGTKKAEFCAQHAR EGMVDVISKRCDHGGCTKQPSYGVEGAKTAKFFSQHAKKGVVGVKSKRCG HQGCTKQPSYGVEGTKKTELFSQHAREGMVDVRNKRCGHLGCNQPVSIVR NERYQEEGDLHPTRQGGYGVPESEVGPQRGWR* back to top