mRNA_C-linearis_contig103.822.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig103.822.1

>prot_C-linearis_contig103.822.1 ID=prot_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=265bp
MRGISQLALLSAAVASLVASVAQGFHLLSGSRRSTAAVDLLRQHREHQRH
RRSSTAELAARGLHHSERGWCVGGATGLRRRDLTGGVAFKGELRMMMAES
GAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMS
KINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREI
RKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVRE
AKRDIQRIAKNIYD*
back to top

mRNA from alignment at C-linearis_contig103:117421..122248+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.822.1 ID=mRNA_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4828bp|location=Sequence derived from alignment at C-linearis_contig103:117421..122248+ (Chordaria linearis ClinC8C monoicous)
CACCGCCTACCCCTTGCACAAGCATACGCAAGCAGCGCACACGTTTGCCA AAGACCGACCTCTGGTTTGTGTGCCGGGGACAGCTAAACGATGCGAGGCA TCTCGCAACTCGCGTTGCTCAGCGCGGCCGTGGCCAGTCTCGTAGCATCA GTCGCGCAAGGGTTTCACTTGTTGTCAGGTAGTAGAAGAAGCACGGCTGC GGTGGACTTGTTACGACAACACCGTGAGCACCAGCGCCACCGCCGTTCTT CGACTGCTGAGTTAGCGGCTAGAGGGTTGCACCATAGTGAGCGTGGCTGG TGTGTCGGTGGAGCAACTGGCCTCCGAAGGAGAGATTTAACGGGAGGAGT AGCCTTCAAGGGGGAGCTGCGCATGATGATGGCCGAGAGCGGCGCTCCTC CCGTCAAGAAGCAGAAGGGGAAAGGGCCGTACAAAGTCATCGCCAATAAC AAGTGGGTGTGGGGTGGTGCGCTTGGTGGTTCGCTTGGGTGTACCGGTGT TTTGGTGACTAGAGTCGATGAAGGGTCTTTGCAACATATGATGCTGCTTC CGTCGATCGGGGTTGTTGAAGCATCAGCCACCTGCATCTACCTACATTAT GGCAACTGCTCGTCAGGTGCAAGCTGTTCTGTCCCGCAGTTGGAACCTGG CAGACCCTCGCAAAATATACCGCCACTGCTTTGTGTGTTCTTGAAAGACT TTGAATGTGGGTTGTCTTTGTGTTGGTTCGGTGTAAAGTAGTGTTTGTAC TGCCGTTTTAGCAAAGGCACATCTAGGTAGCCCTCCTTGCGGAGGCTAAC TAGCGCAGTGTGCTCGACCACCATTTTGCGGGAAAGCAGAACGCAAGCAT TCCTTGCACCAGGGTGCTTGGTGCCAGATGCGGCGGCAGCGTTAAGTCGC GTGTTTCCCCCGCGTTTCTCTCTACAAAAGTGCGCCAAAATGGCCGCGCG CTTGCCGTGCCTCGCCTGCCGATCTCCCTTGCCCCTTGCAGGAAAGCGAG GCGTAACTACGAGATTCTGGAAACGTTCGAGGCCGGGATCGAGCTCGTCG GGTCGGAGGTGAAATCGTGCCGCATGTCCAAGATCAACATGGACGAAGGC TTTGCCCAGGTGTGGTGATATATAGATCAATAGTTGCATGCTTCTCCGCG CCCCTTGCCCCTGATTCTTGGAGCTCGATTGCTCCGAAAAATCTACTTCT ACATCTTGTATTCCCGCAAGGTGTGGCTACGGGAATACATACGTCTTCGC ACCCCCTTTTCCAGATAAATATGCCGTCAGGTTTGGCACCTTCGCTGTTG TCGAGCAATCGCTTTTATCCTCGGCCCAGGTGTGTTAACATTCCACACGA CGCCATGGTAAGAGGGTCCAAGGCATTCCGAGCGTTTCGTGATGAAAAGT CCCCATGTTTCTAAACAGCCCGAAACGTTCGCCGACGGGGCTGCTTTTCA AAGGGGTCTGTGGATGCTGTTGCCTAGTCGGATTGACGCCTGGAGAAATT CTAGGCACACACGCTACCCGGCAGGCTTGACTGTGAAGCTACTCGCCTTT TCGTAGGGTTGGGTCTGAACCAGTACGTACTGCCAGGTCTTGTGTACTGC TGGTAGACCGGGCCGCCAGTACTCCAGTACATACACATCTCACGTACGTC CCTCAATACGCCTCAAGAACCAGCGGAAACCCACATATGCAGCCCGCCTC AAAAGGAGAGAGGAGAGAGAGAGAGAGACACACACAGCACACCCCACACC AACCACATACGCGGCGGGAGACCATAGAACAATGGACAGGTTTGTATCCT CTGCCAGCTCGTCTGCTGCAGACCCAGGCAGTGGTGCTGATGATGCAGGG GCTGCTGCGTCAGCAGCAGCAGCTACGTCCGCTGTGTCAGCAGAGCAGCA GCAGCAGCAGCAGCAGCAGCCCGATGCGCCGGCAGCGCCCAACGCAGACG ACGTGGTGGAAGTGGTTGACACCACCTTGTGCCTTGTACTTTCAACTGCT GATTCTATGATTTTTTGCTTGGTTGTTTGCGTTTTTTATTTCTACAACGC AGACTATAGTATTTTTCAATACTTCAGTTTCTACGGATTAGATACAACCA TTAATTCTAACCATTTCAACTCATGCGTATGCATACGTCTCCCACGATCC TGGAGTTTATAGGCATTGCAAAGTTTAAAATTTGTGCCACATTTCCTCGT GTCGGAAACCAATAAATTTGCTGAAATTTGGGCGTTGTACTCGGGGTTTC TATCGTTTTCACCCCGATAATGCCTCTGTCAGGTGGGCCAAAATCACTCA TTTTTGATGCTCTAGTGAAGCCAAATCGCGTGAAAAGCGCCTCCGGCGGG GCGCCTCCAGCGAACCCCCCTCACCAGCCAGGGGGGGCCGATGGGCGCGG CGCAGCCGCGACCACGCGGCTTCGCCGCGCCACCAGTGTACTGATCGGAT CCAGTATACAGGATCCTGACTGGCTGCGCGAGTACCCAACCCTACCTTTT CGCCATGTCGACTACAACCTATCTCAACCCGAACACCGCTCTCAACGACG ATATCACGCATGGCAAAAGAAGACCCCCCACCCCCCCCTAACGGCGGCGG CTTGCTTTTGTACTCCTCTCTCCCTCCCGAACTATAAAGGCCAAGAACGG ACAGTGCTTTCTGCACGGGGTGCACATCGCGGAATGCGGCGTGTCGAACA GGTTTTATCAGCACGAGCCCAGACGACCCCGAAGACTCCTCCTCCACAAG GTGAAGAAATTTCATGGCACTTTTGTTTTTTCGTTTGCCCTCCGACAATG GCCGGCAAATCTAACCATTGTATACTTTCACTCATCATACATACACTAAA TAAAAAAATGTGAAGACGAAAAAAAAAAAAACACTCCTCGTTCTTGATTT TTAAACACTCACCGTGTACTGAGTGATGCTTGTGATACATGGATATGCAC TTCGAAGTTATGTGTTTAGAAATGGAGAGCCGTTTTGTAGCCGCGGGGGC GGTGAGGGAGTGGTTGGAGTGTCTACATCAGTCCCCCTGTTAAAAAAATA AATTCCACAGGTTGGACGCAGACCGCTGACGTTGAAGTGCTGAGAATGAA TGTAAATGGAGGGCTCGTGGTTTTATAGATGCAGCCACCAGATGTTCTTT CGAGAGTTTTTTTTGGCCAAGGGTCGTGGCTCCTCTCATCGGCGGACCTG CTTGTCCATGATCCAGAACAGAGCACGATGACGGGAGAGGAGAACACACA AAATATAAGGTTTTCTGCTCTGTACCTGTACGCTCAAAGTATGTGTGTAC TTCGAGTATGCATGCTGTCACTGCATGCGGTAGAAGACGTAAAGAAATGG TGATGTTGCACGATGATGTTCTACGACGGTGTCCTACGACAATGTTCTAC GAAAGCGTTGTTGCGTGCGGCGGCTATTTCCCGGGTGCATTGCACGCGTG GTGCTTGTAGGTGAGTGGCATCGCTCAATGCGCTTGTTTGCTGCTGGTTT TGCCTGTCGTGACCGTTCCGTTTCGCACTTTCAGCGAGAGATCAGGAAGC TGCAGGAGAAGGTCGCCCAAAAGGGTATGACCGTCGTACCACTCAAGATC TTCTTCAACGACAGCAACAGGTAAGAGAAGAGAGAAAGCGAAAGGTTCGA CATCTATTCTTGAAGCCCCTGACCACAGTTATGAACCAAGCTACATACGG CGTAGGAGAGGAGGCCATCCGAGATCACCTCCCCGGAAATCGATATTTCA AATCCTCACGTTCCTCCTCCATTCAATGCCCCCGCTCCGAATAGCCCCTT GTCTGGCCATCTCATGCCGCCCGCTAGCTCCACTCGATCGCTGGACCCCG TTTTGAAAGAAAACCAGAAAATCAAAGACGGACCCCCCCCCCACTTTAGA GACGGGACACGGGGCTCCATTCAGGATTGTAATGGTGTTTCGTGTAGTGA TGCAGTGATGTGTTCTGCCCCCGTCTTGTTTTTTGAAAGAATATCAGGAA ATCAAAGACGGAACCTCCCCACATCAGAGACGGGACTCCGTGGGGTCAAA GCGGTAAGTACGGGGCCGGCCGAGTAGAAAAAACACCTGGAGTTTGGAAG ATTTCCATCACCAAAAACCCTGTTGTTTTTTGTTTTTTGTGTTTTCGGAA ACCCGGTCTGTCTTTTGTCGCAAGGCTGAAGGTGGAGATTGCGCTGGCGC AAGGGAAGAACGTCCGAGACAAGAGAGAAGACATCAAGGTCCGAGAGGCC AAGCGAGACATACAGAGAATAGCGAAAAACATCTACGACTAGGCGGGCGG GCACACTCATTTGGTCATGCTGCTGCCGAGCGCGGTGTTGTGGAAGTTGC CGCGTTAGGCAAGCGGAGTGCTCTCGAGGTTAAGTTATGGAGGTGTCGTT AGGACAGTCCGACTACATAATATTACTTCGAAGTATGTAATCTGTGCAGG GTGCGCGTCCGAGGGCACCTGGCGTTCGCGGCCGCGAAGCTGCTAGAAAC TCGAAGTTGCTAGAAAAACGGGAAGGAGCTGAGCGCGTGACGTTTGGCCC ACACAGGGGGAGAGGCGGGCCTTATGAGGTGTCTCATCACCGCGCCGGAG AACTCGGGGATGGTCTACTCTGTACGAGTCGATAAATTAGCCATCGAACG TACTCTGCGTTTGTTTCCCAAGCCTTCGGGTACACCATAGACTACAAGGC GTGTCGATGTTAACGGTAGATTTAACTGCGCCTTCACCGCAACGACCGAA TCGTCAATCATCACCATTGTGCCGTGTTGTTGTTGGATCTTCGGATTTTT TATTTGGCTGCCAAGGACGGCGGGCGGG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig103:117421..122248+

>mRNA_C-linearis_contig103.822.1 ID=mRNA_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at C-linearis_contig103:117421..122248+ (Chordaria linearis ClinC8C monoicous)
ATGCGAGGCATCTCGCAACTCGCGTTGCTCAGCGCGGCCGTGGCCAGTCT
CGTAGCATCAGTCGCGCAAGGGTTTCACTTGTTGTCAGGTAGTAGAAGAA
GCACGGCTGCGGTGGACTTGTTACGACAACACCGTGAGCACCAGCGCCAC
CGCCGTTCTTCGACTGCTGAGTTAGCGGCTAGAGGGTTGCACCATAGTGA
GCGTGGCTGGTGTGTCGGTGGAGCAACTGGCCTCCGAAGGAGAGATTTAA
CGGGAGGAGTAGCCTTCAAGGGGGAGCTGCGCATGATGATGGCCGAGAGC
GGCGCTCCTCCCGTCAAGAAGCAGAAGGGGAAAGGGCCGTACAAAGTCAT
CGCCAATAACAAATGCGAGGCATCTCGCAACTCGCGTTGCTCAGCGCGGC
CGTGGCCAGTCTCGTAGCATCAGTCGCGCAAGGGTTTCACTTGTTGTCAG
GTAGTAGAAGAAGCACGGCTGCGGTGGACTTGTTACGACAACACCGTGAG
CACCAGCGCCACCGCCGTTCTTCGACTGCTGAGTTAGCGGCTAGAGGGTT
GCACCATAGTGAGCGTGGCTGGTGTGTCGGTGGAGCAACTGGCCTCCGAA
GGAGAGATTTAACGGGAGGAGTAGCCTTCAAGGGGGAGCTGCGCATGATG
ATGGCCGAGAGCGGCGCTCCTCCCGTCAAGAAGCAGAAGGGGAAAGGGCC
GTACAAAGTCATCGCCAATAACAAGAAAGCGAGGCGTAACTACGAGATTC
TGGAAACGTTCGAGGCCGGGATCGAGCTCGTCGGGTCGGAGGTGAAATCG
TGCCGCATGTCCAAGATCAACATGGACGAAGGCTTTGCCCAGGAAAGCGA
GGCGTAACTACGAGATTCTGGAAACGTTCGAGGCCGGGATCGAGCTCGTC
GGGTCGGAGGTGAAATCGTGCCGCATGTCCAAGATCAACATGGACGAAGG
CTTTGCCCAGGCCAAGAACGGACAGTGCTTTCTGCACGGGGTGCACATCG
CGGAATGCGGCGTGTCGAACAGGTTTTATCAGCACGAGCCCAGACGACCC
CGAAGACTCCTCCTCCACAAGGCCAAGAACGGACAGTGCTTTCTGCACGG
GGTGCACATCGCGGAATGCGGCGTGTCGAACAGGTTTTATCAGCACGAGC
CCAGACGACCCCGAAGACTCCTCCTCCACAAGCGAGAGATCAGGAAGCTG
CAGGAGAAGGTCGCCCAAAAGGGTATGACCGTCGTACCACTCAAGATCTT
CTTCAACGACAGCAACAGCGAGAGATCAGGAAGCTGCAGGAGAAGGTCGC
CCAAAAGGGTATGACCGTCGTACCACTCAAGATCTTCTTCAACGACAGCA
ACAGGCTGAAGGTGGAGATTGCGCTGGCGCAAGGGAAGAACGTCCGAGAC
AAGAGAGAAGACATCAAGGTCCGAGAGGCCAAGCGAGACATACAGAGAAT
AGCGAAAAACATCTACGACTAGGCTGAAGGTGGAGATTGCGCTGGCGCAA
GGGAAGAACGTCCGAGACAAGAGAGAAGACATCAAGGTCCGAGAGGCCAA
GCGAGACATACAGAGAATAGCGAAAAACATCTACGACTAG
back to top