mRNA_C-linearis_contig103.822.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: D8LKD0_ECTSI (SsrA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD0_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 2.910e-79
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 1

Query:  448 NKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKNIY 879
            ++KARRNYEILE F AGIELVGSEVKSCRMSKINMDEGFAQAK GQCFLHG+HIAECGVSNRFYQHEPRRPRRLLLHKREI+KL++KVAQKGMTVVPLKIFF+D+NRLKVEI LA GKNVRDKREDIK R+AKRDIQRI+KN Y
Sbjct:    3 HRKARRNYEILEKFVAGIELVGSEVKSCRMSKINMDEGFAQAKKGQCFLHGIHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKIFFDDNNRLKVEIGLALGKNVRDKREDIKARDAKRDIQRISKNAY 146

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A835YRQ5_9STRA (Small protein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ5_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.910e-52
Identity = 94/149 (63.09%), Postives = 118/149 (79.19%), Query Frame = 1

Query:  424 GPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            GP+KVIA NK+A RNYEILETFEAGIEL+G+EVKS R  + ++DEG+A AK G+C LHGVHIA    SN + QHE +RPRRLLLHKREI++L++   + G T VPL ++FN  N LK+ +ALA+GKN RDKR+DI+ REAKRD+QR  K
Sbjct:   18 GPFKVIAKNKQAYRNYEILETFEAGIELLGTEVKSARGGRCSIDEGYAAAKRGECVLHGVHIAPYATSNAYDQHEAKRPRRLLLHKREIKRLEDMTTRAGYTAVPLTLYFNHKNLLKISVALARGKNERDKRDDIQQREAKRDLQRAVK 166

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S4FCI8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCI8_CHRCT)

HSP 1 Score: 169 bits (429), Expect = 5.900e-47
Identity = 88/165 (53.33%), Postives = 120/165 (72.73%), Query Frame = 1

Query:  367 LRMMMAESGAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQR 861
            L  + A S +P +   KG G  + +  N++AR+NYE+LE +EAGI LVG+EVKSCR  KIN+ +G+ Q K+G+C+L  VHIA    S  F+QH+  R RRLLL+KREIRKL   V QKG+T+VP+K +FN  NRLK++IALA+GKNV DKR+ IK R+  R+++R
Sbjct:   12 LASLCAMSRSPVIMMAKGTGVARDVTLNRQARQNYELLEEYEAGISLVGTEVKSCRAGKINLRDGYCQIKDGECWLRNVHIARHQFSGTFFQHDETRSRRLLLNKREIRKLDAAVQQKGLTIVPVKAYFNCDNRLKLQIALARGKNVADKRDTIKQRDTDREVKR 176

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S2S2R4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2R4_9STRA)

HSP 1 Score: 169 bits (427), Expect = 6.150e-46
Identity = 94/193 (48.70%), Postives = 125/193 (64.77%), Query Frame = 1

Query:  292 RGWCVGGATGLRRRDLTGGVAFKGELRMMMAESGAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            RGWC GG            VA   EL      +    V     K  Y+V++ NK+ARRNYE LE  EAGI LVG+EVK+ R  +I+M +GFAQ K G+C+L  VHI     S  F+QHE RR R+LLLHK +IRK  ++V  K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R  K
Sbjct:   45 RGWCGGG-----------NVARPAELSAAGRPARRAVVLAAAKKTNYRVVSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIK 226

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S3EVW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVW1_9EUKA)

HSP 1 Score: 166 bits (421), Expect = 1.440e-45
Identity = 83/148 (56.08%), Postives = 114/148 (77.03%), Query Frame = 1

Query:  427 PYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            P K +A N+ ARRNYEIL+ FEAGI L+G+EVKSCR +++ + +G+ + K+G+C+L  VHIA+ G +  F+QHE  RPRRLLLHKREIRKL+++  Q+G+T+VPL+ +FN+ NR+KVEI LA+GK   DKR  IK R+ KR+I R  K
Sbjct:   44 PSKQVAVNRLARRNYEILDDFEAGISLLGTEVKSCRANQMQLRDGYCRIKDGECWLMNVHIAKHGTTGAFFQHEETRPRRLLLHKREIRKLEKESEQRGLTIVPLRCYFNEQNRMKVEIGLAKGKKNEDKRATIKERDQKREISRQLK 191

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S2S2L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2L9_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.270e-45
Identity = 82/147 (55.78%), Postives = 111/147 (75.51%), Query Frame = 1

Query:  430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            Y+V + NK+ARRNYE LE  EAGI LVG+EVK+ R  +I+M +GFAQ K G+C+L  VHI     S  F+QHE RR R+LLLHK +IRK  ++V  K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R  K
Sbjct:    2 YRVFSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIK 148

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: K9FEP1_9CYAN (SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9FEP1_9CYAN)

HSP 1 Score: 160 bits (404), Expect = 1.670e-43
Identity = 84/156 (53.85%), Postives = 117/156 (75.00%), Query Frame = 1

Query:  406 KKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKN 873
            KK +    +KV+A+N++AR  YEIL+++EAGIEL G+EVKS R  K+N+ +G+AQ KNG+ +L  VHI+   ++N+ Y HEPRRPRRLLLHK EIRKL  KV +KG+T+VPLK++     R+KV IA+ +GK + DKRE +K ++ KRDI R+ KN
Sbjct:    6 KKSQPSDGFKVMADNRQARFTYEILDSYEAGIELKGTEVKSIRAGKVNLRDGYAQVKNGEVWLLNVHISPHDMTNQAYNHEPRRPRRLLLHKAEIRKLIGKVEEKGLTLVPLKLYLK-KGRVKVNIAIGRGKKLHDKRESLKQKQEKRDIARMMKN 160

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: UPI0016841931 (SsrA-binding protein SmpB n=2 Tax=Leptolyngbya TaxID=47251 RepID=UPI0016841931)

HSP 1 Score: 157 bits (396), Expect = 2.050e-42
Identity = 81/148 (54.73%), Postives = 112/148 (75.68%), Query Frame = 1

Query:  430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKN 873
            YKV+A+N++AR  YEILETFEAGIEL G+EVKS R  K+N+ +GFA  +NG+ +LH VHI+    +N+ Y H+PRR RRLLLH  EIR+L  +V QKG+T+VPLK+       +K+ + LA+GK + DKRED+K ++AKR+I+R+ KN
Sbjct:    8 YKVVADNREARFQYEILETFEAGIELRGTEVKSIRQGKVNLRDGFALVRNGEVWLHNVHISPHETTNQVYNHDPRRTRRLLLHAEEIRRLIGQVEQKGLTLVPLKMHLK-RGWIKLSLGLARGKKLHDKREDLKRKQAKREIERVIKN 154

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A6M8B3Q8_9CYAN (SsrA-binding protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B3Q8_9CYAN)

HSP 1 Score: 156 bits (395), Expect = 2.780e-42
Identity = 80/147 (54.42%), Postives = 114/147 (77.55%), Query Frame = 1

Query:  430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            YKV+A N++AR  YEILETFEAGIELVG+EVKS R  K N+ +GFA  +NG+ +LH VHI+    +++++ H+PRR R+LL+H++EIRKL  KV Q+G+T+VPLK++      +KV +ALA+GK + DKRED+K ++AKR++QR  K
Sbjct:    8 YKVVAENRQARFEYEILETFEAGIELVGTEVKSVRAGKANLRDGFALIRNGEVWLHNVHISPHDTASQYFNHDPRRTRKLLMHRQEIRKLIGKVEQQGLTLVPLKMYLK-RGWVKVSLALARGKKLHDKREDLKQKQAKREMQRAMK 153

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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: F0Y4W0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4W0_AURAN)

HSP 1 Score: 155 bits (393), Expect = 3.990e-42
Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = 1

Query:  439 IANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            +A+N+KAR +Y ++ T EAGI L G+EVKSCR + +N+ +GFA+ + G  +LH V IA    + R++QHE +  RRLLLHK EIRKL  ++A +G T+VPL  +FND N LKVE+AL +GKNVRDKR+DIK R+ KR +QRI+K
Sbjct:    1 VASNRKARFDYHVVRTMEAGIALTGTEVKSCRNNNVNLRDGFARVEGGSVWLHNVDIAPHATTARYFQHEAKAKRRLLLHKAEIRKLDGELADQGSTLVPLAFYFNDKNLLKVELALCKGKNVRDKRQDIKERDDKRMMQRISK 144

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot

BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D8LKD0_ECTSI	2.910e-79	88.19	SsrA-binding protein n=1 Tax=Ectocarpus siliculosu...	[more]
A0A835YRQ5_9STRA	1.910e-52	63.09	Small protein B n=1 Tax=Tribonema minus TaxID=3033...	[more]
A0A7S4FCI8_CHRCT	5.900e-47	53.33	Hypothetical protein (Fragment) n=1 Tax=Chrysotila...	[more]
A0A7S2S2R4_9STRA	6.150e-46	48.70	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3EVW1_9EUKA	1.440e-45	56.08	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
A0A7S2S2L9_9STRA	3.270e-45	55.78	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
K9FEP1_9CYAN	1.670e-43	53.85	SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxI...	[more]
UPI0016841931	2.050e-42	54.73	SsrA-binding protein SmpB n=2 Tax=Leptolyngbya Tax...	[more]
A0A6M8B3Q8_9CYAN	2.780e-42	54.42	SsrA-binding protein n=4 Tax=Cyanobacteria TaxID=1...	[more]
F0Y4W0_AURAN	3.990e-42	54.86	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]

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