Homology
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
D8LKD0_ECTSI (SsrA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD0_ECTSI)
HSP 1 Score: 252 bits (643), Expect = 2.910e-79
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 1
Query: 448 NKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKNIY 879
++KARRNYEILE F AGIELVGSEVKSCRMSKINMDEGFAQAK GQCFLHG+HIAECGVSNRFYQHEPRRPRRLLLHKREI+KL++KVAQKGMTVVPLKIFF+D+NRLKVEI LA GKNVRDKREDIK R+AKRDIQRI+KN Y
Sbjct: 3 HRKARRNYEILEKFVAGIELVGSEVKSCRMSKINMDEGFAQAKKGQCFLHGIHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKIFFDDNNRLKVEIGLALGKNVRDKREDIKARDAKRDIQRISKNAY 146
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
A0A835YRQ5_9STRA (Small protein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ5_9STRA)
HSP 1 Score: 188 bits (477), Expect = 1.910e-52
Identity = 94/149 (63.09%), Postives = 118/149 (79.19%), Query Frame = 1
Query: 424 GPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
GP+KVIA NK+A RNYEILETFEAGIEL+G+EVKS R + ++DEG+A AK G+C LHGVHIA SN + QHE +RPRRLLLHKREI++L++ + G T VPL ++FN N LK+ +ALA+GKN RDKR+DI+ REAKRD+QR K
Sbjct: 18 GPFKVIAKNKQAYRNYEILETFEAGIELLGTEVKSARGGRCSIDEGYAAAKRGECVLHGVHIAPYATSNAYDQHEAKRPRRLLLHKREIKRLEDMTTRAGYTAVPLTLYFNHKNLLKISVALARGKNERDKRDDIQQREAKRDLQRAVK 166
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
A0A7S4FCI8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCI8_CHRCT)
HSP 1 Score: 169 bits (429), Expect = 5.900e-47
Identity = 88/165 (53.33%), Postives = 120/165 (72.73%), Query Frame = 1
Query: 367 LRMMMAESGAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQR 861
L + A S +P + KG G + + N++AR+NYE+LE +EAGI LVG+EVKSCR KIN+ +G+ Q K+G+C+L VHIA S F+QH+ R RRLLL+KREIRKL V QKG+T+VP+K +FN NRLK++IALA+GKNV DKR+ IK R+ R+++R
Sbjct: 12 LASLCAMSRSPVIMMAKGTGVARDVTLNRQARQNYELLEEYEAGISLVGTEVKSCRAGKINLRDGYCQIKDGECWLRNVHIARHQFSGTFFQHDETRSRRLLLNKREIRKLDAAVQQKGLTIVPVKAYFNCDNRLKLQIALARGKNVADKRDTIKQRDTDREVKR 176
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
A0A7S2S2R4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2R4_9STRA)
HSP 1 Score: 169 bits (427), Expect = 6.150e-46
Identity = 94/193 (48.70%), Postives = 125/193 (64.77%), Query Frame = 1
Query: 292 RGWCVGGATGLRRRDLTGGVAFKGELRMMMAESGAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
RGWC GG VA EL + V K Y+V++ NK+ARRNYE LE EAGI LVG+EVK+ R +I+M +GFAQ K G+C+L VHI S F+QHE RR R+LLLHK +IRK ++V K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R K
Sbjct: 45 RGWCGGG-----------NVARPAELSAAGRPARRAVVLAAAKKTNYRVVSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIK 226
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
A0A7S3EVW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVW1_9EUKA)
HSP 1 Score: 166 bits (421), Expect = 1.440e-45
Identity = 83/148 (56.08%), Postives = 114/148 (77.03%), Query Frame = 1
Query: 427 PYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
P K +A N+ ARRNYEIL+ FEAGI L+G+EVKSCR +++ + +G+ + K+G+C+L VHIA+ G + F+QHE RPRRLLLHKREIRKL+++ Q+G+T+VPL+ +FN+ NR+KVEI LA+GK DKR IK R+ KR+I R K
Sbjct: 44 PSKQVAVNRLARRNYEILDDFEAGISLLGTEVKSCRANQMQLRDGYCRIKDGECWLMNVHIAKHGTTGAFFQHEETRPRRLLLHKREIRKLEKESEQRGLTIVPLRCYFNEQNRMKVEIGLAKGKKNEDKRATIKERDQKREISRQLK 191
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
A0A7S2S2L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2L9_9STRA)
HSP 1 Score: 164 bits (415), Expect = 3.270e-45
Identity = 82/147 (55.78%), Postives = 111/147 (75.51%), Query Frame = 1
Query: 430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
Y+V + NK+ARRNYE LE EAGI LVG+EVK+ R +I+M +GFAQ K G+C+L VHI S F+QHE RR R+LLLHK +IRK ++V K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R K
Sbjct: 2 YRVFSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIK 148
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
K9FEP1_9CYAN (SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9FEP1_9CYAN)
HSP 1 Score: 160 bits (404), Expect = 1.670e-43
Identity = 84/156 (53.85%), Postives = 117/156 (75.00%), Query Frame = 1
Query: 406 KKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKN 873
KK + +KV+A+N++AR YEIL+++EAGIEL G+EVKS R K+N+ +G+AQ KNG+ +L VHI+ ++N+ Y HEPRRPRRLLLHK EIRKL KV +KG+T+VPLK++ R+KV IA+ +GK + DKRE +K ++ KRDI R+ KN
Sbjct: 6 KKSQPSDGFKVMADNRQARFTYEILDSYEAGIELKGTEVKSIRAGKVNLRDGYAQVKNGEVWLLNVHISPHDMTNQAYNHEPRRPRRLLLHKAEIRKLIGKVEEKGLTLVPLKLYLK-KGRVKVNIAIGRGKKLHDKRESLKQKQEKRDIARMMKN 160
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
UPI0016841931 (SsrA-binding protein SmpB n=2 Tax=Leptolyngbya TaxID=47251 RepID=UPI0016841931)
HSP 1 Score: 157 bits (396), Expect = 2.050e-42
Identity = 81/148 (54.73%), Postives = 112/148 (75.68%), Query Frame = 1
Query: 430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKN 873
YKV+A+N++AR YEILETFEAGIEL G+EVKS R K+N+ +GFA +NG+ +LH VHI+ +N+ Y H+PRR RRLLLH EIR+L +V QKG+T+VPLK+ +K+ + LA+GK + DKRED+K ++AKR+I+R+ KN
Sbjct: 8 YKVVADNREARFQYEILETFEAGIELRGTEVKSIRQGKVNLRDGFALVRNGEVWLHNVHISPHETTNQVYNHDPRRTRRLLLHAEEIRRLIGQVEQKGLTLVPLKMHLK-RGWIKLSLGLARGKKLHDKREDLKRKQAKREIERVIKN 154
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
A0A6M8B3Q8_9CYAN (SsrA-binding protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B3Q8_9CYAN)
HSP 1 Score: 156 bits (395), Expect = 2.780e-42
Identity = 80/147 (54.42%), Postives = 114/147 (77.55%), Query Frame = 1
Query: 430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
YKV+A N++AR YEILETFEAGIELVG+EVKS R K N+ +GFA +NG+ +LH VHI+ +++++ H+PRR R+LL+H++EIRKL KV Q+G+T+VPLK++ +KV +ALA+GK + DKRED+K ++AKR++QR K
Sbjct: 8 YKVVAENRQARFEYEILETFEAGIELVGTEVKSVRAGKANLRDGFALIRNGEVWLHNVHISPHDTASQYFNHDPRRTRKLLMHRQEIRKLIGKVEQQGLTLVPLKMYLK-RGWVKVSLALARGKKLHDKREDLKQKQAKREMQRAMK 153
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match:
F0Y4W0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4W0_AURAN)
HSP 1 Score: 155 bits (393), Expect = 3.990e-42
Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = 1
Query: 439 IANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
+A+N+KAR +Y ++ T EAGI L G+EVKSCR + +N+ +GFA+ + G +LH V IA + R++QHE + RRLLLHK EIRKL ++A +G T+VPL +FND N LKVE+AL +GKNVRDKR+DIK R+ KR +QRI+K
Sbjct: 1 VASNRKARFDYHVVRTMEAGIALTGTEVKSCRNNNVNLRDGFARVEGGSVWLHNVDIAPHATTARYFQHEAKAKRRLLLHKAEIRKLDGELADQGSTLVPLAFYFNDKNLLKVELALCKGKNVRDKRQDIKERDDKRMMQRISK 144
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.91e-79 / Id = 88.19 Expect = 1.91e-52 / Id = 63.09 Expect = 5.90e-47 / Id = 53.33 Expect = 6.15e-46 / Id = 48.70 Expect = 1.44e-45 / Id = 56.08 Expect = 3.27e-45 / Id = 55.78 Expect = 1.67e-43 / Id = 53.85 Expect = 2.05e-42 / Id = 54.73 Expect = 2.78e-42 / Id = 54.42 Expect = 3.99e-42 / Id = 54.86 Sequence D8LKD0_ECTSI A0A835YRQ5_9STRA A0A7S4FCI8_CHRCT A0A7S2S2R4_9STRA A0A7S3EVW1_9EUKA A0A7S2S2L9_9STRA K9FEP1_9CYAN UPI0016841931 A0A6M8B3Q8_9CYAN F0Y4W0_AURAN
Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.822.1
>prot_C-linearis_contig103.822.1 ID=prot_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=265bp
MRGISQLALLSAAVASLVASVAQGFHLLSGSRRSTAAVDLLRQHREHQRH RRSSTAELAARGLHHSERGWCVGGATGLRRRDLTGGVAFKGELRMMMAES GAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMS KINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREI RKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVRE AKRDIQRIAKNIYD* back to top mRNA from alignment at C-linearis_contig103:117421..122248+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.822.1 ID=mRNA_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4828bp|location=Sequence derived from alignment at C-linearis_contig103:117421..122248+ (Chordaria linearis ClinC8C monoicous)CACCGCCTACCCCTTGCACAAGCATACGCAAGCAGCGCACACGTTTGCCA
AAGACCGACCTCTGGTTTGTGTGCCGGGGACAGCTAAACG ATGCGAGGCA
TCTCGCAACTCGCGTTGCTCAGCGCGGCCGTGGCCAGTCTCGTAGCATCA
GTCGCGCAAGGGTTTCACTTGTTGTCAGGTAGTAGAAGAAGCACGGCTGC
GGTGGACTTGTTACGACAACACCGTGAGCACCAGCGCCACCGCCGTTCTT
CGACTGCTGAGTTAGCGGCTAGAGGGTTGCACCATAGTGAGCGTGGCTGG
TGTGTCGGTGGAGCAACTGGCCTCCGAAGGAGAGATTTAACGGGAGGAGT
AGCCTTCAAGGGGGAGCTGCGCATGATGATGGCCGAGAGCGGCGCTCCTC
CCGTCAAGAAGCAGAAGGGGAAAGGGCCGTACAAAGTCATCGCCAATAAC
AA GTGGGTGTGGGGTGGTGCGCTTGGTGGTTCGCTTGGGTGTACCGGTGT
TTTGGTGACTAGAGTCGATGAAGGGTCTTTGCAACATATGATGCTGCTTC
CGTCGATCGGGGTTGTTGAAGCATCAGCCACCTGCATCTACCTACATTAT
GGCAACTGCTCGTCAGGTGCAAGCTGTTCTGTCCCGCAGTTGGAACCTGG
CAGACCCTCGCAAAATATACCGCCACTGCTTTGTGTGTTCTTGAAAGACT
TTGAATGTGGGTTGTCTTTGTGTTGGTTCGGTGTAAAGTAGTGTTTGTAC
TGCCGTTTTAGCAAAGGCACATCTAGGTAGCCCTCCTTGCGGAGGCTAAC
TAGCGCAGTGTGCTCGACCACCATTTTGCGGGAAAGCAGAACGCAAGCAT
TCCTTGCACCAGGGTGCTTGGTGCCAGATGCGGCGGCAGCGTTAAGTCGC
GTGTTTCCCCCGCGTTTCTCTCTACAAAAGTGCGCCAAAATGGCCGCGCG
CTTGCCGTGCCTCGCCTGCCGATCTCCCTTGCCCCTTGCAGGAAAGCGAG
GCGTAACTACGAGATTCTGGAAACGTTCGAGGCCGGGATCGAGCTCGTCG
GGTCGGAGGTGAAATCGTGCCGCATGTCCAAGATCAACATGGACGAAGGC
TTTGCCCAG GTGTGGTGATATATAGATCAATAGTTGCATGCTTCTCCGCG
CCCCTTGCCCCTGATTCTTGGAGCTCGATTGCTCCGAAAAATCTACTTCT
ACATCTTGTATTCCCGCAAGGTGTGGCTACGGGAATACATACGTCTTCGC
ACCCCCTTTTCCAGATAAATATGCCGTCAGGTTTGGCACCTTCGCTGTTG
TCGAGCAATCGCTTTTATCCTCGGCCCAGGTGTGTTAACATTCCACACGA
CGCCATGGTAAGAGGGTCCAAGGCATTCCGAGCGTTTCGTGATGAAAAGT
CCCCATGTTTCTAAACAGCCCGAAACGTTCGCCGACGGGGCTGCTTTTCA
AAGGGGTCTGTGGATGCTGTTGCCTAGTCGGATTGACGCCTGGAGAAATT
CTAGGCACACACGCTACCCGGCAGGCTTGACTGTGAAGCTACTCGCCTTT
TCGTAGGGTTGGGTCTGAACCAGTACGTACTGCCAGGTCTTGTGTACTGC
TGGTAGACCGGGCCGCCAGTACTCCAGTACATACACATCTCACGTACGTC
CCTCAATACGCCTCAAGAACCAGCGGAAACCCACATATGCAGCCCGCCTC
AAAAGGAGAGAGGAGAGAGAGAGAGAGACACACACAGCACACCCCACACC
AACCACATACGCGGCGGGAGACCATAGAACAATGGACAGGTTTGTATCCT
CTGCCAGCTCGTCTGCTGCAGACCCAGGCAGTGGTGCTGATGATGCAGGG
GCTGCTGCGTCAGCAGCAGCAGCTACGTCCGCTGTGTCAGCAGAGCAGCA
GCAGCAGCAGCAGCAGCAGCCCGATGCGCCGGCAGCGCCCAACGCAGACG
ACGTGGTGGAAGTGGTTGACACCACCTTGTGCCTTGTACTTTCAACTGCT
GATTCTATGATTTTTTGCTTGGTTGTTTGCGTTTTTTATTTCTACAACGC
AGACTATAGTATTTTTCAATACTTCAGTTTCTACGGATTAGATACAACCA
TTAATTCTAACCATTTCAACTCATGCGTATGCATACGTCTCCCACGATCC
TGGAGTTTATAGGCATTGCAAAGTTTAAAATTTGTGCCACATTTCCTCGT
GTCGGAAACCAATAAATTTGCTGAAATTTGGGCGTTGTACTCGGGGTTTC
TATCGTTTTCACCCCGATAATGCCTCTGTCAGGTGGGCCAAAATCACTCA
TTTTTGATGCTCTAGTGAAGCCAAATCGCGTGAAAAGCGCCTCCGGCGGG
GCGCCTCCAGCGAACCCCCCTCACCAGCCAGGGGGGGCCGATGGGCGCGG
CGCAGCCGCGACCACGCGGCTTCGCCGCGCCACCAGTGTACTGATCGGAT
CCAGTATACAGGATCCTGACTGGCTGCGCGAGTACCCAACCCTACCTTTT
CGCCATGTCGACTACAACCTATCTCAACCCGAACACCGCTCTCAACGACG
ATATCACGCATGGCAAAAGAAGACCCCCCACCCCCCCCTAACGGCGGCGG
CTTGCTTTTGTACTCCTCTCTCCCTCCCGAACTATAAAGGCCAAGAACGG
ACAGTGCTTTCTGCACGGGGTGCACATCGCGGAATGCGGCGTGTCGAACA
GGTTTTATCAGCACGAGCCCAGACGACCCCGAAGACTCCTCCTCCACAAG
GTGAAGAAATTTCATGGCACTTTTGTTTTTTCGTTTGCCCTCCGACAATG
GCCGGCAAATCTAACCATTGTATACTTTCACTCATCATACATACACTAAA
TAAAAAAATGTGAAGACGAAAAAAAAAAAAACACTCCTCGTTCTTGATTT
TTAAACACTCACCGTGTACTGAGTGATGCTTGTGATACATGGATATGCAC
TTCGAAGTTATGTGTTTAGAAATGGAGAGCCGTTTTGTAGCCGCGGGGGC
GGTGAGGGAGTGGTTGGAGTGTCTACATCAGTCCCCCTGTTAAAAAAATA
AATTCCACAGGTTGGACGCAGACCGCTGACGTTGAAGTGCTGAGAATGAA
TGTAAATGGAGGGCTCGTGGTTTTATAGATGCAGCCACCAGATGTTCTTT
CGAGAGTTTTTTTTGGCCAAGGGTCGTGGCTCCTCTCATCGGCGGACCTG
CTTGTCCATGATCCAGAACAGAGCACGATGACGGGAGAGGAGAACACACA
AAATATAAGGTTTTCTGCTCTGTACCTGTACGCTCAAAGTATGTGTGTAC
TTCGAGTATGCATGCTGTCACTGCATGCGGTAGAAGACGTAAAGAAATGG
TGATGTTGCACGATGATGTTCTACGACGGTGTCCTACGACAATGTTCTAC
GAAAGCGTTGTTGCGTGCGGCGGCTATTTCCCGGGTGCATTGCACGCGTG
GTGCTTGTAGGTGAGTGGCATCGCTCAATGCGCTTGTTTGCTGCTGGTTT
TGCCTGTCGTGACCGTTCCGTTTCGCACTTTCAGCGAGAGATCAGGAAGC
TGCAGGAGAAGGTCGCCCAAAAGGGTATGACCGTCGTACCACTCAAGATC
TTCTTCAACGACAGCAACAG GTAAGAGAAGAGAGAAAGCGAAAGGTTCGA
CATCTATTCTTGAAGCCCCTGACCACAGTTATGAACCAAGCTACATACGG
CGTAGGAGAGGAGGCCATCCGAGATCACCTCCCCGGAAATCGATATTTCA
AATCCTCACGTTCCTCCTCCATTCAATGCCCCCGCTCCGAATAGCCCCTT
GTCTGGCCATCTCATGCCGCCCGCTAGCTCCACTCGATCGCTGGACCCCG
TTTTGAAAGAAAACCAGAAAATCAAAGACGGACCCCCCCCCCACTTTAGA
GACGGGACACGGGGCTCCATTCAGGATTGTAATGGTGTTTCGTGTAGTGA
TGCAGTGATGTGTTCTGCCCCCGTCTTGTTTTTTGAAAGAATATCAGGAA
ATCAAAGACGGAACCTCCCCACATCAGAGACGGGACTCCGTGGGGTCAAA
GCGGTAAGTACGGGGCCGGCCGAGTAGAAAAAACACCTGGAGTTTGGAAG
ATTTCCATCACCAAAAACCCTGTTGTTTTTTGTTTTTTGTGTTTTCGGAA
ACCCGGTCTGTCTTTTGTCGCAAGGCTGAAGGTGGAGATTGCGCTGGCGC
AAGGGAAGAACGTCCGAGACAAGAGAGAAGACATCAAGGTCCGAGAGGCC
AAGCGAGACATACAGAGAATAGCGAAAAACATCTACGACTAG GCGGGCGG
GCACACTCATTTGGTCATGCTGCTGCCGAGCGCGGTGTTGTGGAAGTTGC
CGCGTTAGGCAAGCGGAGTGCTCTCGAGGTTAAGTTATGGAGGTGTCGTT
AGGACAGTCCGACTACATAATATTACTTCGAAGTATGTAATCTGTGCAGG
GTGCGCGTCCGAGGGCACCTGGCGTTCGCGGCCGCGAAGCTGCTAGAAAC
TCGAAGTTGCTAGAAAAACGGGAAGGAGCTGAGCGCGTGACGTTTGGCCC
ACACAGGGGGAGAGGCGGGCCTTATGAGGTGTCTCATCACCGCGCCGGAG
AACTCGGGGATGGTCTACTCTGTACGAGTCGATAAATTAGCCATCGAACG
TACTCTGCGTTTGTTTCCCAAGCCTTCGGGTACACCATAGACTACAAGGC
GTGTCGATGTTAACGGTAGATTTAACTGCGCCTTCACCGCAACGACCGAA
TCGTCAATCATCACCATTGTGCCGTGTTGTTGTTGGATCTTCGGATTTTT
TATTTGGCTGCCAAGGACGGCGGGCGGG back to top Coding sequence (CDS) from alignment at C-linearis_contig103:117421..122248+
>mRNA_C-linearis_contig103.822.1 ID=mRNA_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at C-linearis_contig103:117421..122248+ (Chordaria linearis ClinC8C monoicous) ATGCGAGGCATCTCGCAACTCGCGTTGCTCAGCGCGGCCGTGGCCAGTCT CGTAGCATCAGTCGCGCAAGGGTTTCACTTGTTGTCAGGTAGTAGAAGAA GCACGGCTGCGGTGGACTTGTTACGACAACACCGTGAGCACCAGCGCCAC CGCCGTTCTTCGACTGCTGAGTTAGCGGCTAGAGGGTTGCACCATAGTGA GCGTGGCTGGTGTGTCGGTGGAGCAACTGGCCTCCGAAGGAGAGATTTAA CGGGAGGAGTAGCCTTCAAGGGGGAGCTGCGCATGATGATGGCCGAGAGC GGCGCTCCTCCCGTCAAGAAGCAGAAGGGGAAAGGGCCGTACAAAGTCAT CGCCAATAACAAATGCGAGGCATCTCGCAACTCGCGTTGCTCAGCGCGGC CGTGGCCAGTCTCGTAGCATCAGTCGCGCAAGGGTTTCACTTGTTGTCAG GTAGTAGAAGAAGCACGGCTGCGGTGGACTTGTTACGACAACACCGTGAG CACCAGCGCCACCGCCGTTCTTCGACTGCTGAGTTAGCGGCTAGAGGGTT GCACCATAGTGAGCGTGGCTGGTGTGTCGGTGGAGCAACTGGCCTCCGAA GGAGAGATTTAACGGGAGGAGTAGCCTTCAAGGGGGAGCTGCGCATGATG ATGGCCGAGAGCGGCGCTCCTCCCGTCAAGAAGCAGAAGGGGAAAGGGCC GTACAAAGTCATCGCCAATAACAAGAAAGCGAGGCGTAACTACGAGATTC TGGAAACGTTCGAGGCCGGGATCGAGCTCGTCGGGTCGGAGGTGAAATCG TGCCGCATGTCCAAGATCAACATGGACGAAGGCTTTGCCCAGGAAAGCGA GGCGTAACTACGAGATTCTGGAAACGTTCGAGGCCGGGATCGAGCTCGTC GGGTCGGAGGTGAAATCGTGCCGCATGTCCAAGATCAACATGGACGAAGG CTTTGCCCAGGCCAAGAACGGACAGTGCTTTCTGCACGGGGTGCACATCG CGGAATGCGGCGTGTCGAACAGGTTTTATCAGCACGAGCCCAGACGACCC CGAAGACTCCTCCTCCACAAGGCCAAGAACGGACAGTGCTTTCTGCACGG GGTGCACATCGCGGAATGCGGCGTGTCGAACAGGTTTTATCAGCACGAGC CCAGACGACCCCGAAGACTCCTCCTCCACAAGCGAGAGATCAGGAAGCTG CAGGAGAAGGTCGCCCAAAAGGGTATGACCGTCGTACCACTCAAGATCTT CTTCAACGACAGCAACAGCGAGAGATCAGGAAGCTGCAGGAGAAGGTCGC CCAAAAGGGTATGACCGTCGTACCACTCAAGATCTTCTTCAACGACAGCA ACAGGCTGAAGGTGGAGATTGCGCTGGCGCAAGGGAAGAACGTCCGAGAC AAGAGAGAAGACATCAAGGTCCGAGAGGCCAAGCGAGACATACAGAGAAT AGCGAAAAACATCTACGACTAGGCTGAAGGTGGAGATTGCGCTGGCGCAA GGGAAGAACGTCCGAGACAAGAGAGAAGACATCAAGGTCCGAGAGGCCAA GCGAGACATACAGAGAATAGCGAAAAACATCTACGACTAG back to top