mRNA_C-linearis_contig102.780.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig102.780.1

>prot_C-linearis_contig102.780.1 ID=prot_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=282bp
MPLVHRKRVATALAFLACLATRPVADGFLLSPSFSIARKPRVPHNGSISN
FAISYFQGASQHQNVVQKVQNDAQRPEELLGEVDTRPSGEKLVNRRAYFE
QLLYKTVATVAISGASSLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASS
WFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKA
FTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGG
GTKGSQFITKAEKSLKIAKEEFKVVNQILGI*
back to top

mRNA from alignment at C-linearis_contig102:231557..236332+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.780.1 ID=mRNA_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4776bp|location=Sequence derived from alignment at C-linearis_contig102:231557..236332+ (Chordaria linearis ClinC8C monoicous)
AAGCAGCTCACGGAGAGGGAAAGCAGGTTCGCGATGCCTTTGGTTCACCG GAAACGTGTGGCTACTGCGCTTGCGTTCCTCGCCTGCCTCGCGACCCGTC CCGTCGCTGATGGCTTCCTCCTCTCCCCTTCCTTTTCGATAGCCCGAAAG GTGCGTTGTGTGTGACGCACCCAAAAGAAAAATGATCGCCGAGAGAGCGG GTTGCATGTAGGAGGCAGGATGCGCCATCCTATCGTGTAGCGAGAGAGGG TTTTTAACGGTAGGGTGGCCGCATCGTTGAGGAGGTATGGAAACCGCAGC TGATCTTTTGTCGAAAGCCTCGAGTTCCACATAACGGCAGCATTTCGAAC TTCGCGATTTCTTACTTCCAGGGCGCATCCCAGCACCAAAACGTAGTTCA AAAGGTTCAAAACGACGCCCAACGACCAGAGGAGCTGCTGGGCGAGGTCG ACACGCGACCCTCCGGGGAGAAGCTCGTAAACCGACGAGCGTACTTCGAG CAGCTGCTTTATAAGACCGTGGCAACCGTGGCAATAAGCGGGGCATCGTC TCTGGTGGCGCCTCCGAGGCGCCTCCTTGCTGCGGGGCTGGGGTACGAGG AGCCGGGGTCACGGTGGCTGCCCGAGGTGAAGATGAAGTTGATGTTTAGA GGAATGAACCCCGAACACACGTACGCGTGCGCGATGTGTCGCTTTTGGAT GCGCTTGCCCCCCCGCCGCGAGCCTGTTTTCCATCAACGGCTGCCTTGAC CTCGGATGGAAGTTGCTCTTTACTCTCGCACCTTGGACCTGCTGTAACCA ATTTTAATTTTGAACGTACGTGTGTTCGCTTTTTTTTTCTCCACATATAA CCCGAGCTCGCAGCATTTCTGCCGGATAGGAGCTCTAGCCCGTGGTCACA CAGAAGGGTTTCTCTCCCTGAGGCCCTCCACCCTCCCCTCCTGCGCGCCT CTAATATTTAATGCGAGAAGAGCGCGGCAATCTCTTCCCTCTGTGTACAC ACGACTAGCGCTTTCCACAACCAGGGACGTATTTGAGAGAAAAACGCTTT TTTCGTCTTCACATCTACTTCCAGAGTTCGCAGGGGCGCCTTGCCACGAG TGAACCTGCTGGCTACCGTGAGACCACTATAGTAGACCGCCGGGGCGACG TTTGGATATCAAATGGTAGTAAAAACGGTGCGGGCGGGCTGTTGTTTGAG TGGCTTAGACCAGGATCACACCGAGACGCTCGAACATCCCCCCGCCTTGT GCTTCGGGCGGCACCGGTCGTGTGTGTCTTCATGGATGTCGCATTGAGCC CGTGCTGGGTCCAGAGGTGGATGCGTGGCCTGTACACTGCTGTATGTATT CTGCGCGTTTTGCATAATGCAGTGCGCTGGAGCTGCCGTTGGGCACCAAC TCTCACTTGATCCACGCAACGGGGATCGACGCTCCCCCCACCCCGGAGTC TGTTCGTTTCTCCCGACCAAACCTTGTTGAAGCTAGCTTTGGTATCCAGC TTGCCGGAAGATGGCATTGCCCAGATCCTCTGTGTGTCCCTCGACCCGAT GGCGTACGTGTCGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TTTTACCATGGTTTCACATAGGATGTGGTTGGTCGGAAGAAAGTTAGAAA TTTTATTCGAGCGAAGCGCGTTTCTAATCCCCGCCTTTTTTCGCGTCTTG TGGTCGCTGTGTCCTGGGAGCGGCGTAGCTGTGTGCACCTCTCCAATGGT CGGTGGCTGGTCTTACAGCAGTACTTGCACCTCAAAAATTGAACAGCTGT TCTTACGGCGAAGTTTCGAAGTTTCAGAAAGCTATTGGAAGTTCATCCCT CCAAAGGGTAACTCGTATTGTACGTACGGTACTACTCTGTTCTGCGATAT GTGACCCGTCTTGCGGTTTGGTACATTCCCCGCACTCATCTTCAACCCTA CTTTTTCTGTGGCCACCGCCTGCCGCTCGCCGTGTCGCAGGGCAACCCGA AGGAGGCTTCTTCGTGGTTCCCCCTCTTGAAAAAGTGCTACGAGTCTTTG GAAGGTGAGGTGTTTTGTGCAGGCACTACATGAGCCGTCACAGCAGCGCA TTTCTCCTGAACCGATATTTTGCAATACAAGCAGCACACGAAGTAGTAGG CGTGGTCGGGTCTCACTCTTCGTCATGGGGTTTATAGTAGAGATGTAGTA CACCCGTCTCATGCATTTAAAGCTCTTGGATGCTGCAGCAGGTTTGTGTC AAGTATCAAGAGGATTTTTTTTTTCTCGCCCATTAATGTTTTTTCGTAGC CTGCCTCCTCTTCTTCACTACAACTAGATAGGCTACCATCCGGGGTCACA CAGGAGGGGATGTCTCCATCTACCTCCTGCGGTGGATTGTTGCCTATTAG TTGTGACGACGCAATCAAACAGACACGTGCCTTTTCTCCATGATAGCACC GCGGAACTGAAGTATCAATCACTGCATGTCGCGTACAAGTACACCTCGAG TCTTGTCGTGCTGGCGTGCCAGCACCATAAGCTTTGTTGTGACTAGTTGA GCCCCAACTCGTCTATTTATTTCTTGTCGCCTACAGTGGTGAGATAGACT CTAAACTCGACTCGGCTTTGTCCCACTCCATTGCATACTGTCAGACGTGC TTGCGAACTGGGAGAAGTACACGGTGAGGCAAGATGGGGATGCGATCCGG AGACTGATCGGGACGATTGGGGTGTCGAGCCCGCTGTCTTCGATACGAAA GGCGTTCACCAGCATAAGAGATGCCGAGGAAGAATCGGTGAGGATAGCTT GATGGACAAGATAGGTATATAAACAGCATGAAATTGAGCGCATGCTGGAT GGTGGACGTCGCCGGCAACCGGCGTTCGCAGGGCCTGTTGTTAAAGCTTT CGTTAGGGGAGTGACACCACTCGAGTGAGAGAGACGTTTTTCTTTGTCTC GCACACGCACACCCATTCTCCGTTTCATGCATGATTGTCGAGCCATACTG CTGTGCCCGGTGCACAAGTCTAACTCCATACGAAGGGGGCGATATTATCA CGTGCGTGTAAAGGCCAGACACCCAGAGAAGACGGTTAGATGCCACAATG CACCCATAGGGCAATGTTCTCTGGAAATTGCCAAACCAGAACAACCGATC AACTTTTAGGAGTCTGTTGTCGATATGCAAGGGAGCGTGCACTTGATGCG AGACACCCTTATGACGATGCAGCTCGCCGATCAAGCGACTAGCTCAAAAC CCCACGGTGCTTAGTGGTCGGTTCTTTGTGAGCTTGCCCGGGCGAAATAG GTAGTGATGTGATGTCCAACGTGGTCGTGACTTTGGCTCCCTCGTCGCCC TTCCCCAGTTCCCCACGAATGTAGCCGCGTGGGTTGATCTTCATGCTCAC CTCCTTTTGACCACTTTTTGTTTGCTGTGCCAACACCCGACTTTCGCGTG TCGAACTACAGCAGTATTTCCCCAACACCTGAATGTTTTCGCTCTCGCTC TCCCGTTTTGCTTGGGTATGAACCTTGCTTTTTGTTGTGCACCACATGAG CAGCAAGGGGATATCGACGTGATCGAGTATGTGGAGGCGTACATGGAGGT GCTGACAGCTCTCGGGGATGCAGAGAACGACCTCTACTCCGCTAATTTCG CCGACTACTCGGGCGGGGGAGGAACCAAGGTCAGTCGACTCAAAGAGACG CTTGCACGCGGCTTGCGAATGGCCACTGACTGTAATTTCAACCTTATCCG CTGGTTCCGCAAGTGGTGCGGATCTACTGTTGCCATGCCTTGCTTCTATG ATACTATCGAGGAATATTCCCCGGTACATGTAATTTCGCTCCAGATGTCT TGTATGAACAACATTTTTCCGTTTTCGGAACGTTGATCGACGTCTGCGGT TCGTTGCCTTGTGCTTTGCTTTCATCACTTGCGGCGGGTTTTTTATCAGG GGAGTCAATTCATCACCAAGGCGGAGAAGAGTCTCAAGATTGCGAAGGAA GAGTTCAAGGTGGTCAACCAAATCCTCGGCATCTGACTGATCTTCAACAG AAGTGGGAAATGTTTTGCGCCTCTAGTGCCTGGGCGTTTGACGTATAACG GCGTCGCATGGCGAACATTCCTTTGTTGTCACAGCCGTGCGTTGTGATGC GACAACTCCTAGGGTGGTGTTAATTCGGTTTACATTTGTCAAATGTTTTC TCACCTTCAAATGCGTAAATTCATGCTGCTGACGCGTTTGCGGGCCAGGC CGAAACCTGCTCGCGTCACACGCGCCAGCTTCGGGCCGTTTGTATGCTGT GGCTCCGGCTGAACTCAAATTTGCGGTAGATTCTTTACGCCGGCCGCGCG CGACGTGTGACGGTATCGTCCTCGGGATGACGTAGAGCGCCGGCGCGCGA TGTTGTGTTGTTTGATCCCGCTTCGGTTTGGCACCAAGCGTGTGCGCTAG CGGACTTGTGGAACTGTTGCTTTTTTTTAGTGCCATGCGGAAGGGTGTTG CTGTACCCACCCTTTGAAACTATGACCTTGGTTTTTTTGAGTGATTTTGC GTTATTCTTTGGGGCACCACACCGGGGGGAGGGGTTACGATGATCGAGTA GGAGAGCTAATGTGGATGACCCGTGTCAGTGATCTCACCAAAGCTACTTG AGGCGTCCGTTAAACAGTCTCCTCATTCGATGGGTGTTGCAGGGGCGAAA GGATTTCCCACCCTCAACCTTGCACGAATCTAGTACACGCGCGCAGACCT AGACGACCGATGTACCGGCCAAATCC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig102:231557..236332+

>mRNA_C-linearis_contig102.780.1 ID=mRNA_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at C-linearis_contig102:231557..236332+ (Chordaria linearis ClinC8C monoicous)
ATGCCTTTGGTTCACCGGAAACGTGTGGCTACTGCGCTTGCGTTCCTCGC
CTGCCTCGCGACCCGTCCCGTCGCTGATGGCTTCCTCCTCTCCCCTTCCT
TTTCGATAGCCCGAAAGATGCCTTTGGTTCACCGGAAACGTGTGGCTACT
GCGCTTGCGTTCCTCGCCTGCCTCGCGACCCGTCCCGTCGCTGATGGCTT
CCTCCTCTCCCCTTCCTTTTCGATAGCCCGAAAGCCTCGAGTTCCACATA
ACGGCAGCATTTCGAACTTCGCGATTTCTTACTTCCAGGGCGCATCCCAG
CACCAAAACGTAGTTCAAAAGGTTCAAAACGACGCCCAACGACCAGAGGA
GCTGCTGGGCGAGGTCGACACGCGACCCTCCGGGGAGAAGCTCGTAAACC
GACGAGCGTACTTCGAGCAGCTGCTTTATAAGACCGTGGCAACCGTGGCA
ATAAGCGGGGCATCGTCTCTGGTGGCGCCTCCGAGGCGCCTCCTTGCTGC
GGGGCTGGGGTACGAGGAGCCGGGGTCACGGTGGCTGCCCGAGCCTCGAG
TTCCACATAACGGCAGCATTTCGAACTTCGCGATTTCTTACTTCCAGGGC
GCATCCCAGCACCAAAACGTAGTTCAAAAGGTTCAAAACGACGCCCAACG
ACCAGAGGAGCTGCTGGGCGAGGTCGACACGCGACCCTCCGGGGAGAAGC
TCGTAAACCGACGAGCGTACTTCGAGCAGCTGCTTTATAAGACCGTGGCA
ACCGTGGCAATAAGCGGGGCATCGTCTCTGGTGGCGCCTCCGAGGCGCCT
CCTTGCTGCGGGGCTGGGGTACGAGGAGCCGGGGTCACGGTGGCTGCCCG
AGGGCAACCCGAAGGAGGCTTCTTCGTGGTTCCCCCTCTTGAAAAAGTGC
TACGAGTCTTTGGAAGGGCAACCCGAAGGAGGCTTCTTCGTGGTTCCCCC
TCTTGAAAAAGTGCTACGAGTCTTTGGAAGACGTGCTTGCGAACTGGGAG
AAGTACACGGTGAGGCAAGATGGGGATGCGATCCGGAGACTGATCGGGAC
GATTGGGGTGTCGAGCCCGCTGTCTTCGATACGAAAGGCGTTCACCAGCA
TAAGAGATGCCGAGGAAGAATCGACGTGCTTGCGAACTGGGAGAAGTACA
CGGTGAGGCAAGATGGGGATGCGATCCGGAGACTGATCGGGACGATTGGG
GTGTCGAGCCCGCTGTCTTCGATACGAAAGGCGTTCACCAGCATAAGAGA
TGCCGAGGAAGAATCGCAAGGGGATATCGACGTGATCGAGTATGTGGAGG
CGTACATGGAGGTGCTGACAGCTCTCGGGGATGCAGAGAACGACCTCTAC
TCCGCTAATTTCGCCGACTACTCGGGCGGGGGAGGAACCAAGCAAGGGGA
TATCGACGTGATCGAGTATGTGGAGGCGTACATGGAGGTGCTGACAGCTC
TCGGGGATGCAGAGAACGACCTCTACTCCGCTAATTTCGCCGACTACTCG
GGCGGGGGAGGAACCAAGGGGAGTCAATTCATCACCAAGGCGGAGAAGAG
TCTCAAGATTGCGAAGGAAGAGTTCAAGGTGGTCAACCAAATCCTCGGCA
TCTGAGGGAGTCAATTCATCACCAAGGCGGAGAAGAGTCTCAAGATTGCG
AAGGAAGAGTTCAAGGTGGTCAACCAAATCCTCGGCATCTGA
back to top