mRNA_C-linearis_contig102.780.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: D7FH27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH27_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 4.010e-111
Identity = 198/283 (69.96%), Postives = 218/283 (77.03%), Query Frame = 1

Query:   34 MPLVHRKRV-ATALAFLACLATRPVADGFLLSPSFSIARKPRVPHNGSISNFAISYFQGASQHQNVVQKVQNDAQRPEELLGEVDTRPSGEKLVNRRAYFEQLLYKTVATVAISGASSLV-APPRRLLAAGLGYEEPGSRWLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQILGI 876
            M LV + RV AT  AFL CLA  P  DGFLLSPS ++AR    P++G     AI+   G +  Q V++K       P+E+   +   P     +NRRAYFEQL+YK+VATVAISGASSLV AP  R  A    +EE  SRW PEGNPKEA+SWFPLL KCY+SLEDVL NWEKYT RQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEE SQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFI KA KSLKIAK+EFK VN+ILGI
Sbjct:    1 MTLVRQNRVVATIFAFL-CLAV-PSCDGFLLSPSLALARLRSAPNDGDC---AIARQPGGAASQQVLEK-------PDEMPRTLAEEPR----LNRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYA----FEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFIAKANKSLKIAKDEFKEVNKILGI 263

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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A835ZH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH00_9STRA)

HSP 1 Score: 157 bits (397), Expect = 5.000e-42
Identity = 80/143 (55.94%), Postives = 108/143 (75.52%), Query Frame = 1

Query:  448 WLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVR--QDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQIL 870
            W P G+PK A+SWFPLLK  Y +L+D+LANW+        DGDA+RR IGT+GVSSPLS+++K F++IRD+E+ ++ +ID+ ++VEAY  VLT L DAENDLYSANFAD+SGGG  KG+ FI  A+KS+  AK  F+ + + L
Sbjct:   14 WGPTGDPKVAASWFPLLKLQYAALKDLLANWDAVAPAGSTDGDAVRRKIGTVGVSSPLSAVKKTFSAIRDSEDVAE-EIDLADFVEAYQAVLTDLSDAENDLYSANFADFSGGGQLKGTNFIKAAKKSIAAAKLNFEEILRTL 155

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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A7S2UXU3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU3_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.510e-30
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1

Query:  382 SLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVV 858
            +L++    L +A +GY      W   GNPK   +W P ++  Y+ LE ++ NW++   + +GD +RR +GT+GVSS L+S +KA   +RDA +      D IE+ E   EV+T LGDAEND YSANFA++SGGG  K +QFI KA   +K A   +K+V
Sbjct:   77 TLISSATLLPSASIGYPPYPQAWKTSGNPKSYKTWAPQVRDGYKRLEIMVENWDEIAAKDNGDEMRRFLGTVGVSSSLTSFKKALYGVRDAVD-LPSSFDEIEWAEKAEEVVTCLGDAENDFYSANFAEFSGGGQLKSAQFIKKARPFVKKA---YKIV 231

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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A7S4DIQ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIQ5_HETAK)

HSP 1 Score: 110 bits (276), Expect = 4.770e-24
Identity = 58/135 (42.96%), Postives = 88/135 (65.19%), Query Frame = 1

Query:  460 GNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLS--SIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVV 858
            G P   S+W   L++  + L +VL NW+   +R +GD +R+ IGT+G  S L+  S+++AF  + +A++     +D+ EY E Y EVLTAL DAEN+ YSANFAD+SGGG  K SQFI +++K + +A+   K +
Sbjct:   95 GPPASFSTWLAQLEEGEKILVNVLQNWKDLELRDNGDEVRKFIGTVGPVSALNPVSLKRAFLKLAEADD-FPDYVDLDEYAEKYEEVLTALADAENEAYSANFADFSGGGQLKSSQFIKRSQKRIAVAQRALKEI 228

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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A2V3IQN4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN4_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 1.520e-9
Identity = 34/104 (32.69%), Postives = 61/104 (58.65%), Query Frame = 1

Query:  460 GNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEA-YMEVLTALGDAENDLYSANFAD 768
            G+PK+  ++ P ++  Y++L  +  +WE  T   DGD +RR++GT+GV SPL +IRK          ++  D ++IE +E  + +V+  +   +  LYSA+F +
Sbjct:   14 GDPKKLETYLPQIEAGYQALLGLDRDWEAKTKDFDGDVVRRVLGTVGVKSPLFNIRKPLLKSWQIVADTSTDDELIERLETEWNDVINGISSIDFQLYSASFTE 117

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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A5J4Z903_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z903_PORPP)

HSP 1 Score: 63.2 bits (152), Expect = 1.320e-7
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 1

Query:  508 YESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDA--EEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFAD 768
            Y+ + D+  NW + T   DGD +RR +GT+G SSPL +I+KAF ++  +  E +   D D+ E  E Y  VL  +   +  LYS NF++
Sbjct:  104 YDVMLDLERNWTERTKAFDGDIVRRYLGTVGKSSPLFNIKKAFMAVWKSLSERDDVSDADLEELNEKYNLVLDGISGVDFQLYSVNFSE 192

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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A813JFT0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JFT0_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 7.730e-6
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1

Query:  493 LLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 777
            +L +   +L D L NW +  V  DGD+IRR++GT+G +SP+ ++ +A  S+      +  + D++E  EA   V   L  A+   YSANFAD SG
Sbjct:  124 ILSRSEAALADALKNWSR--VAADGDSIRRVLGTVGATSPVYALPRAMRSL------TAENFDILEQTEA---VEFHLRQADFLAYSANFADSSG 207

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot

BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FH27_ECTSI	4.010e-111	69.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZH00_9STRA	5.000e-42	55.94	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2UXU3_9STRA	2.510e-30	42.77	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S4DIQ5_HETAK	4.770e-24	42.96	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A2V3IQN4_9FLOR	1.520e-9	32.69	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A5J4Z903_PORPP	1.320e-7	38.20	Uncharacterized protein n=1 Tax=Porphyridium purpu...	[more]
A0A813JFT0_POLGL	7.730e-6	37.89	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]

Properties


Property Name	Value
Hectar predicted targeting category	chloroplast
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-26_003260.1
Exons	6
Model size	1619
Cds size	846
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig102.780.1	prot_C-linearis_contig102.780.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig102 231590..235592 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927369.0259984-UTR-C-linearis_contig102:231556..231589	1622927369.0259984-UTR-C-linearis_contig102:231556..231589	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig102 231557..231589 +
1690879658.1966565-UTR-C-linearis_contig102:231556..231589	1690879658.1966565-UTR-C-linearis_contig102:231556..231589	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig102 231557..231589 +
1622927369.1106298-UTR-C-linearis_contig102:235592..236332	1622927369.1106298-UTR-C-linearis_contig102:235592..236332	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig102 235593..236332 +
1690879658.273115-UTR-C-linearis_contig102:235592..236332	1690879658.273115-UTR-C-linearis_contig102:235592..236332	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig102 235593..236332 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927369.038588-CDS-C-linearis_contig102:231589..231706	1622927369.038588-CDS-C-linearis_contig102:231589..231706	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 231590..231706 +
1690879658.206105-CDS-C-linearis_contig102:231589..231706	1690879658.206105-CDS-C-linearis_contig102:231589..231706	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 231590..231706 +
1622927369.049532-CDS-C-linearis_contig102:231873..232182	1622927369.049532-CDS-C-linearis_contig102:231873..232182	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 231874..232182 +
1690879658.2155201-CDS-C-linearis_contig102:231873..232182	1690879658.2155201-CDS-C-linearis_contig102:231873..232182	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 231874..232182 +
1622927369.0601728-CDS-C-linearis_contig102:233546..233610	1622927369.0601728-CDS-C-linearis_contig102:233546..233610	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 233547..233610 +
1690879658.2254364-CDS-C-linearis_contig102:233546..233610	1690879658.2254364-CDS-C-linearis_contig102:233546..233610	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 233547..233610 +
1622927369.0708735-CDS-C-linearis_contig102:234200..234343	1622927369.0708735-CDS-C-linearis_contig102:234200..234343	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 234201..234343 +
1690879658.235762-CDS-C-linearis_contig102:234200..234343	1690879658.235762-CDS-C-linearis_contig102:234200..234343	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 234201..234343 +
1622927369.083565-CDS-C-linearis_contig102:235109..235235	1622927369.083565-CDS-C-linearis_contig102:235109..235235	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 235110..235235 +
1690879658.2454433-CDS-C-linearis_contig102:235109..235235	1690879658.2454433-CDS-C-linearis_contig102:235109..235235	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 235110..235235 +
1622927369.0983658-CDS-C-linearis_contig102:235505..235592	1622927369.0983658-CDS-C-linearis_contig102:235505..235592	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 235506..235592 +
1690879658.2622793-CDS-C-linearis_contig102:235505..235592	1690879658.2622793-CDS-C-linearis_contig102:235505..235592	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig102 235506..235592 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig102:231557..236332+
coding sequence from alignment at C-linearis_contig102:231557..236332+

protein sequence of mRNA_C-linearis_contig102.780.1

>prot_C-linearis_contig102.780.1 ID=prot_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=282bp
MPLVHRKRVATALAFLACLATRPVADGFLLSPSFSIARKPRVPHNGSISN
FAISYFQGASQHQNVVQKVQNDAQRPEELLGEVDTRPSGEKLVNRRAYFE
QLLYKTVATVAISGASSLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASS
WFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKA
FTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGG
GTKGSQFITKAEKSLKIAKEEFKVVNQILGI*

mRNA from alignment at C-linearis_contig102:231557..236332+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig102.780.1 ID=mRNA_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4776bp|location=Sequence derived from alignment at C-linearis_contig102:231557..236332+ (Chordaria linearis ClinC8C monoicous)
AAGCAGCTCACGGAGAGGGAAAGCAGGTTCGCGATGCCTTTGGTTCACCG
GAAACGTGTGGCTACTGCGCTTGCGTTCCTCGCCTGCCTCGCGACCCGTC
CCGTCGCTGATGGCTTCCTCCTCTCCCCTTCCTTTTCGATAGCCCGAAAG
GTGCGTTGTGTGTGACGCACCCAAAAGAAAAATGATCGCCGAGAGAGCGG
GTTGCATGTAGGAGGCAGGATGCGCCATCCTATCGTGTAGCGAGAGAGGG
TTTTTAACGGTAGGGTGGCCGCATCGTTGAGGAGGTATGGAAACCGCAGC
TGATCTTTTGTCGAAAGCCTCGAGTTCCACATAACGGCAGCATTTCGAAC
TTCGCGATTTCTTACTTCCAGGGCGCATCCCAGCACCAAAACGTAGTTCA
AAAGGTTCAAAACGACGCCCAACGACCAGAGGAGCTGCTGGGCGAGGTCG
ACACGCGACCCTCCGGGGAGAAGCTCGTAAACCGACGAGCGTACTTCGAG
CAGCTGCTTTATAAGACCGTGGCAACCGTGGCAATAAGCGGGGCATCGTC
TCTGGTGGCGCCTCCGAGGCGCCTCCTTGCTGCGGGGCTGGGGTACGAGG
AGCCGGGGTCACGGTGGCTGCCCGAGGTGAAGATGAAGTTGATGTTTAGA
GGAATGAACCCCGAACACACGTACGCGTGCGCGATGTGTCGCTTTTGGAT
GCGCTTGCCCCCCCGCCGCGAGCCTGTTTTCCATCAACGGCTGCCTTGAC
CTCGGATGGAAGTTGCTCTTTACTCTCGCACCTTGGACCTGCTGTAACCA
ATTTTAATTTTGAACGTACGTGTGTTCGCTTTTTTTTTCTCCACATATAA
CCCGAGCTCGCAGCATTTCTGCCGGATAGGAGCTCTAGCCCGTGGTCACA
CAGAAGGGTTTCTCTCCCTGAGGCCCTCCACCCTCCCCTCCTGCGCGCCT
CTAATATTTAATGCGAGAAGAGCGCGGCAATCTCTTCCCTCTGTGTACAC
ACGACTAGCGCTTTCCACAACCAGGGACGTATTTGAGAGAAAAACGCTTT
TTTCGTCTTCACATCTACTTCCAGAGTTCGCAGGGGCGCCTTGCCACGAG
TGAACCTGCTGGCTACCGTGAGACCACTATAGTAGACCGCCGGGGCGACG
TTTGGATATCAAATGGTAGTAAAAACGGTGCGGGCGGGCTGTTGTTTGAG
TGGCTTAGACCAGGATCACACCGAGACGCTCGAACATCCCCCCGCCTTGT
GCTTCGGGCGGCACCGGTCGTGTGTGTCTTCATGGATGTCGCATTGAGCC
CGTGCTGGGTCCAGAGGTGGATGCGTGGCCTGTACACTGCTGTATGTATT
CTGCGCGTTTTGCATAATGCAGTGCGCTGGAGCTGCCGTTGGGCACCAAC
TCTCACTTGATCCACGCAACGGGGATCGACGCTCCCCCCACCCCGGAGTC
TGTTCGTTTCTCCCGACCAAACCTTGTTGAAGCTAGCTTTGGTATCCAGC
TTGCCGGAAGATGGCATTGCCCAGATCCTCTGTGTGTCCCTCGACCCGAT
GGCGTACGTGTCGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TTTTACCATGGTTTCACATAGGATGTGGTTGGTCGGAAGAAAGTTAGAAA
TTTTATTCGAGCGAAGCGCGTTTCTAATCCCCGCCTTTTTTCGCGTCTTG
TGGTCGCTGTGTCCTGGGAGCGGCGTAGCTGTGTGCACCTCTCCAATGGT
CGGTGGCTGGTCTTACAGCAGTACTTGCACCTCAAAAATTGAACAGCTGT
TCTTACGGCGAAGTTTCGAAGTTTCAGAAAGCTATTGGAAGTTCATCCCT
CCAAAGGGTAACTCGTATTGTACGTACGGTACTACTCTGTTCTGCGATAT
GTGACCCGTCTTGCGGTTTGGTACATTCCCCGCACTCATCTTCAACCCTA
CTTTTTCTGTGGCCACCGCCTGCCGCTCGCCGTGTCGCAGGGCAACCCGA
AGGAGGCTTCTTCGTGGTTCCCCCTCTTGAAAAAGTGCTACGAGTCTTTG
GAAGGTGAGGTGTTTTGTGCAGGCACTACATGAGCCGTCACAGCAGCGCA
TTTCTCCTGAACCGATATTTTGCAATACAAGCAGCACACGAAGTAGTAGG
CGTGGTCGGGTCTCACTCTTCGTCATGGGGTTTATAGTAGAGATGTAGTA
CACCCGTCTCATGCATTTAAAGCTCTTGGATGCTGCAGCAGGTTTGTGTC
AAGTATCAAGAGGATTTTTTTTTTCTCGCCCATTAATGTTTTTTCGTAGC
CTGCCTCCTCTTCTTCACTACAACTAGATAGGCTACCATCCGGGGTCACA
CAGGAGGGGATGTCTCCATCTACCTCCTGCGGTGGATTGTTGCCTATTAG
TTGTGACGACGCAATCAAACAGACACGTGCCTTTTCTCCATGATAGCACC
GCGGAACTGAAGTATCAATCACTGCATGTCGCGTACAAGTACACCTCGAG
TCTTGTCGTGCTGGCGTGCCAGCACCATAAGCTTTGTTGTGACTAGTTGA
GCCCCAACTCGTCTATTTATTTCTTGTCGCCTACAGTGGTGAGATAGACT
CTAAACTCGACTCGGCTTTGTCCCACTCCATTGCATACTGTCAGACGTGC
TTGCGAACTGGGAGAAGTACACGGTGAGGCAAGATGGGGATGCGATCCGG
AGACTGATCGGGACGATTGGGGTGTCGAGCCCGCTGTCTTCGATACGAAA
GGCGTTCACCAGCATAAGAGATGCCGAGGAAGAATCGGTGAGGATAGCTT
GATGGACAAGATAGGTATATAAACAGCATGAAATTGAGCGCATGCTGGAT
GGTGGACGTCGCCGGCAACCGGCGTTCGCAGGGCCTGTTGTTAAAGCTTT
CGTTAGGGGAGTGACACCACTCGAGTGAGAGAGACGTTTTTCTTTGTCTC
GCACACGCACACCCATTCTCCGTTTCATGCATGATTGTCGAGCCATACTG
CTGTGCCCGGTGCACAAGTCTAACTCCATACGAAGGGGGCGATATTATCA
CGTGCGTGTAAAGGCCAGACACCCAGAGAAGACGGTTAGATGCCACAATG
CACCCATAGGGCAATGTTCTCTGGAAATTGCCAAACCAGAACAACCGATC
AACTTTTAGGAGTCTGTTGTCGATATGCAAGGGAGCGTGCACTTGATGCG
AGACACCCTTATGACGATGCAGCTCGCCGATCAAGCGACTAGCTCAAAAC
CCCACGGTGCTTAGTGGTCGGTTCTTTGTGAGCTTGCCCGGGCGAAATAG
GTAGTGATGTGATGTCCAACGTGGTCGTGACTTTGGCTCCCTCGTCGCCC
TTCCCCAGTTCCCCACGAATGTAGCCGCGTGGGTTGATCTTCATGCTCAC
CTCCTTTTGACCACTTTTTGTTTGCTGTGCCAACACCCGACTTTCGCGTG
TCGAACTACAGCAGTATTTCCCCAACACCTGAATGTTTTCGCTCTCGCTC
TCCCGTTTTGCTTGGGTATGAACCTTGCTTTTTGTTGTGCACCACATGAG
CAGCAAGGGGATATCGACGTGATCGAGTATGTGGAGGCGTACATGGAGGT
GCTGACAGCTCTCGGGGATGCAGAGAACGACCTCTACTCCGCTAATTTCG
CCGACTACTCGGGCGGGGGAGGAACCAAGGTCAGTCGACTCAAAGAGACG
CTTGCACGCGGCTTGCGAATGGCCACTGACTGTAATTTCAACCTTATCCG
CTGGTTCCGCAAGTGGTGCGGATCTACTGTTGCCATGCCTTGCTTCTATG
ATACTATCGAGGAATATTCCCCGGTACATGTAATTTCGCTCCAGATGTCT
TGTATGAACAACATTTTTCCGTTTTCGGAACGTTGATCGACGTCTGCGGT
TCGTTGCCTTGTGCTTTGCTTTCATCACTTGCGGCGGGTTTTTTATCAGG
GGAGTCAATTCATCACCAAGGCGGAGAAGAGTCTCAAGATTGCGAAGGAA
GAGTTCAAGGTGGTCAACCAAATCCTCGGCATCTGACTGATCTTCAACAG
AAGTGGGAAATGTTTTGCGCCTCTAGTGCCTGGGCGTTTGACGTATAACG
GCGTCGCATGGCGAACATTCCTTTGTTGTCACAGCCGTGCGTTGTGATGC
GACAACTCCTAGGGTGGTGTTAATTCGGTTTACATTTGTCAAATGTTTTC
TCACCTTCAAATGCGTAAATTCATGCTGCTGACGCGTTTGCGGGCCAGGC
CGAAACCTGCTCGCGTCACACGCGCCAGCTTCGGGCCGTTTGTATGCTGT
GGCTCCGGCTGAACTCAAATTTGCGGTAGATTCTTTACGCCGGCCGCGCG
CGACGTGTGACGGTATCGTCCTCGGGATGACGTAGAGCGCCGGCGCGCGA
TGTTGTGTTGTTTGATCCCGCTTCGGTTTGGCACCAAGCGTGTGCGCTAG
CGGACTTGTGGAACTGTTGCTTTTTTTTAGTGCCATGCGGAAGGGTGTTG
CTGTACCCACCCTTTGAAACTATGACCTTGGTTTTTTTGAGTGATTTTGC
GTTATTCTTTGGGGCACCACACCGGGGGGAGGGGTTACGATGATCGAGTA
GGAGAGCTAATGTGGATGACCCGTGTCAGTGATCTCACCAAAGCTACTTG
AGGCGTCCGTTAAACAGTCTCCTCATTCGATGGGTGTTGCAGGGGCGAAA
GGATTTCCCACCCTCAACCTTGCACGAATCTAGTACACGCGCGCAGACCT
AGACGACCGATGTACCGGCCAAATCC

Coding sequence (CDS) from alignment at C-linearis_contig102:231557..236332+

>mRNA_C-linearis_contig102.780.1 ID=mRNA_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at C-linearis_contig102:231557..236332+ (Chordaria linearis ClinC8C monoicous)
ATGCCTTTGGTTCACCGGAAACGTGTGGCTACTGCGCTTGCGTTCCTCGC
CTGCCTCGCGACCCGTCCCGTCGCTGATGGCTTCCTCCTCTCCCCTTCCT
TTTCGATAGCCCGAAAGATGCCTTTGGTTCACCGGAAACGTGTGGCTACT
GCGCTTGCGTTCCTCGCCTGCCTCGCGACCCGTCCCGTCGCTGATGGCTT
CCTCCTCTCCCCTTCCTTTTCGATAGCCCGAAAGCCTCGAGTTCCACATA
ACGGCAGCATTTCGAACTTCGCGATTTCTTACTTCCAGGGCGCATCCCAG
CACCAAAACGTAGTTCAAAAGGTTCAAAACGACGCCCAACGACCAGAGGA
GCTGCTGGGCGAGGTCGACACGCGACCCTCCGGGGAGAAGCTCGTAAACC
GACGAGCGTACTTCGAGCAGCTGCTTTATAAGACCGTGGCAACCGTGGCA
ATAAGCGGGGCATCGTCTCTGGTGGCGCCTCCGAGGCGCCTCCTTGCTGC
GGGGCTGGGGTACGAGGAGCCGGGGTCACGGTGGCTGCCCGAGCCTCGAG
TTCCACATAACGGCAGCATTTCGAACTTCGCGATTTCTTACTTCCAGGGC
GCATCCCAGCACCAAAACGTAGTTCAAAAGGTTCAAAACGACGCCCAACG
ACCAGAGGAGCTGCTGGGCGAGGTCGACACGCGACCCTCCGGGGAGAAGC
TCGTAAACCGACGAGCGTACTTCGAGCAGCTGCTTTATAAGACCGTGGCA
ACCGTGGCAATAAGCGGGGCATCGTCTCTGGTGGCGCCTCCGAGGCGCCT
CCTTGCTGCGGGGCTGGGGTACGAGGAGCCGGGGTCACGGTGGCTGCCCG
AGGGCAACCCGAAGGAGGCTTCTTCGTGGTTCCCCCTCTTGAAAAAGTGC
TACGAGTCTTTGGAAGGGCAACCCGAAGGAGGCTTCTTCGTGGTTCCCCC
TCTTGAAAAAGTGCTACGAGTCTTTGGAAGACGTGCTTGCGAACTGGGAG
AAGTACACGGTGAGGCAAGATGGGGATGCGATCCGGAGACTGATCGGGAC
GATTGGGGTGTCGAGCCCGCTGTCTTCGATACGAAAGGCGTTCACCAGCA
TAAGAGATGCCGAGGAAGAATCGACGTGCTTGCGAACTGGGAGAAGTACA
CGGTGAGGCAAGATGGGGATGCGATCCGGAGACTGATCGGGACGATTGGG
GTGTCGAGCCCGCTGTCTTCGATACGAAAGGCGTTCACCAGCATAAGAGA
TGCCGAGGAAGAATCGCAAGGGGATATCGACGTGATCGAGTATGTGGAGG
CGTACATGGAGGTGCTGACAGCTCTCGGGGATGCAGAGAACGACCTCTAC
TCCGCTAATTTCGCCGACTACTCGGGCGGGGGAGGAACCAAGCAAGGGGA
TATCGACGTGATCGAGTATGTGGAGGCGTACATGGAGGTGCTGACAGCTC
TCGGGGATGCAGAGAACGACCTCTACTCCGCTAATTTCGCCGACTACTCG
GGCGGGGGAGGAACCAAGGGGAGTCAATTCATCACCAAGGCGGAGAAGAG
TCTCAAGATTGCGAAGGAAGAGTTCAAGGTGGTCAACCAAATCCTCGGCA
TCTGAGGGAGTCAATTCATCACCAAGGCGGAGAAGAGTCTCAAGATTGCG
AAGGAAGAGTTCAAGGTGGTCAACCAAATCCTCGGCATCTGA