Homology
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
A0A836CH29_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH29_9STRA)
HSP 1 Score: 90.5 bits (223), Expect = 4.080e-17
Identity = 48/85 (56.47%), Postives = 64/85 (75.29%), Query Frame = 3
Query: 90 SDMMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDSPEKWRENMEMALEMFKAQKATMQQEAADEDNGAADVDDLDDD 344
S MM+E GSPEK+E++R+AILENP LKQAMAQLPGFS+M++ P+KW E+M A EM + Q++ +Q + G DVDDLDD+
Sbjct: 158 SPMMDEFFGSPEKIEESRKAILENPMLKQAMAQLPGFSEMLEDPDKWMESMLQAKEMLEQQRSMLQDQGGAPLGG--DVDDLDDE 240
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
D8LE10_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE10_ECTSI)
HSP 1 Score: 78.2 bits (191), Expect = 9.640e-13
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 3
Query: 90 SDMMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDS 218
SDMMEEVLG+PEKMEQARQAIL+NPTLKQAM QLPGF+DMIDS
Sbjct: 164 SDMMEEVLGNPEKMEQARQAILDNPTLKQAMTQLPGFADMIDS 206
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
A0A7S1ZLX3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZLX3_TRICV)
HSP 1 Score: 64.7 bits (156), Expect = 3.570e-8
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 3
Query: 90 SDMMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDSPEKWRENMEMALEMFK 266
S M ++ + PE++E++RQ ILENP +K M +PG D+++ PEKWRE M+ A EM+K
Sbjct: 172 SPMFQQYMNDPEQLEKSRQMILENPMMKSMMGSMPGMEDILNDPEKWRETMQAAGEMYK 230
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
A0A7S4D8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8F3_HETAK)
HSP 1 Score: 61.2 bits (147), Expect = 4.980e-8
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 3
Query: 90 SDMMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDSPEKWRENMEMALEMFKAQKATMQQEAADEDNGAADVDDL 335
SDM ++ G PEK+E+ RQA++ NP +KQ +PGF ++++ P+ +RE M A + KAQ + A + ++DDL
Sbjct: 30 SDMFSQLFGDPEKLEETRQALISNPMMKQMFGSMPGFEEILNDPDAFREAMTTAQQEMKAQAEARKAARAAKSELTNEIDDL 111
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
A0A7S2Y1L4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1L4_9STRA)
HSP 1 Score: 62.4 bits (150), Expect = 2.200e-7
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 3
Query: 90 SDMMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDSPEKWRENMEMALEMFKAQKATMQQEAADEDNGAADVDDLDDD 344
S M+ E PEK+E ARQ I +NP L+++M+ +PG S++ID P+KWRE M A E ++ DVDDL +D
Sbjct: 170 SPMLNEFFSDPEKLEMARQQIADNPMLRESMSSMPGMSEIIDDPQKWREAMTAAKEQMDMLRS----------QAPKDVDDLPED 244
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
A0A7S1UXN8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UXN8_9STRA)
HSP 1 Score: 61.2 bits (147), Expect = 5.210e-7
Identity = 26/57 (45.61%), Postives = 41/57 (71.93%), Query Frame = 3
Query: 96 MMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDSPEKWRENMEMALEMFK 266
M +E + PEK+EQARQ +L+NP LK + Q+PG D+++ P+ WRE M+ A+ M++
Sbjct: 146 MFKEFMTDPEKLEQARQMMLQNPMLKGMLGQVPGMEDVVNDPDAWRETMQAAMTMYQ 202
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
A0A7S2N0G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0G5_9STRA)
HSP 1 Score: 58.2 bits (139), Expect = 9.220e-6
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 3
Query: 90 SDMMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDSPEKWRENMEMALEMFK 266
S + +E + PEK+EQ+RQ IL+NP +K MA +PGF ++++ KWRE M A +M++
Sbjct: 200 SPLFQEYMKDPEKLEQSRQMILQNPLMKSMMAGMPGFDEILNDEVKWRETMIAAADMYQ 258
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Match:
M1VHM4_CYAM1 (Peptidylprolyl isomerase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VHM4_CYAM1)
HSP 1 Score: 57.8 bits (138), Expect = 2.530e-5
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 3
Query: 90 SDMMEEVLGSPEKMEQARQAILENPTLKQAMAQLPGFSDMIDSPEKWRENMEMALEMFKAQKA-TMQQEAADEDNGAA 320
S M+E L S EK E++RQA+L NP L+Q M P F ++++ P+KW E+M A E+F Q + EAA + +GAA
Sbjct: 216 SPAMQEYLSSAEKQEESRQALLNNPFLRQWMDADPQFREVVEDPQKWAESMRAARELFAQQGGLSAATEAAGQTSGAA 293
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.733.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 8
0 1 Expect = 4.08e-17 / Id = 56.47 Expect = 9.64e-13 / Id = 90.70 Expect = 3.57e-8 / Id = 47.46 Expect = 4.98e-8 / Id = 36.59 Expect = 2.20e-7 / Id = 40.00 Expect = 5.21e-7 / Id = 45.61 Expect = 9.22e-6 / Id = 44.07 Expect = 2.53e-5 / Id = 43.59 Sequence A0A836CH29_9STRA D8LE10_ECTSI A0A7S1ZLX3_TRICV A0A7S4D8F3_HETAK A0A7S2Y1L4_9STRA A0A7S1UXN8_9STRA A0A7S2N0G5_9STRA M1VHM4_CYAM1 back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.733.1
>prot_C-linearis_contig101.733.1 ID=prot_C-linearis_contig101.733.1|Name=mRNA_C-linearis_contig101.733.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=109bp
MPGGMPPGVTPEMYQKMMKEMMNSDMMEEVLGSPEKMEQARQAILENPTL back to top mRNA from alignment at C-linearis_contig101:211121..213633+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.733.1 ID=mRNA_C-linearis_contig101.733.1|Name=mRNA_C-linearis_contig101.733.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2513bp|location=Sequence derived from alignment at C-linearis_contig101:211121..213633+ (Chordaria linearis ClinC8C monoicous)CGGGAGGCTTGGGCGGGGGG ATGCCGGGGGGCATGCCTCCGGGCGTGACG
CCCGAGATGTACCAGAAGATGATGAAG GTGTGTGTGTGAGTTTGATTCAT
TTTCTCGTCCAGTGGGTTGTTGTTGCTCTGTGTGTTCTCTACTCTCGTGA
AGTCAAAGTTAATGCTAAGTGGTGGCTTTCGTGGGTTTGTCTAGCACCGT
AGACTATAAAATAGTAGCTGGTTTACCTTGTGCGATGTTGGCGAGGAAAC
GATATGCGGGTGAACCAACGCTTGACCTGACCTGCGTTGGGGTAAGGTAT
GAGTCATCCCGACGGGGGTCAGTCGTATGTGTGCTCCCTCTCGGAATGAG
AACCCGAACCCATCCTTTGCAGATGGTTAGTTTGCCTACGTCGTGAAGAT
CTGTGAGACGTCAGCATTTTCCGGGGACCCTTTCTTGGCTGTGCCTGATT
GCATATGTGTTTGATGCCTATGATATACGTTTTGTGTATGACATCACACC
TTTTTGTTTGGTGATGCTTGGTGGCGGCGTTGCGCAGGGTAAGCTGTAGG
AGCGCCCTTGTCCCTAGAGCAGTGTTTCCACCATAAGACTCAAGTGGAAG
GCACGTTCGTGGTGTTGGCGGTTTTTCTGCTGTTGCTTCAGGTGTTTCGA
ATTTGCTCCTTTCCGAGACTGTCTTGTTGATATTGTCTGTACAATATTCC
TCATCTTCACAGGGGTTTGTGTTGTTGACTTGTTCTTTATGGCCTCGCCG
GGCAACGAACCTCGATATTCGATGGGTGTTGGTGTTCGTTTCGTGCGTGT
GTCATGTATGACGATGTACTCGCACGTACCTAGCATTGACCAACGAGAAG
ACGAAAGCTTGAAACTTGTCACTCTTGGCAGGAAAGACGGACGCGGTGTT
TGTTTTTTTCGTGTCGAAACCTTACCTCCCCCCTCGCATTCTCCCAACAT
CGTCTGCGCTGGCTGTGCTTTTTCATCCCGCAACACTCCCTCCCGCAGGA
GATGATGAACTCCGATATGATGGAGGAAGTGCTGGGCAGCCCCGAGAAGA
TGGAGCAGGCACGGCAGGCCATCCTAGAAAACCCTACCCTCAAGCAGGCC
ATGGCGCAGTTGCCGGGCTTCTCCGACATG GTGAGTAAACCAGTACTGCG
GTACACCACACAGGGCGGAAGGACTGCTGTCGTTTGTAAAGGAGGGAAGG
TGGCTCTGCGAGAGGTGCCCGTCTGTGGGACCCCTTGTCGGAAATATTTT
TTCAGTGTTGTACATGTAGTACATGGAGCATAGACGAGAAACCTTGGGGT
TGGCTATTGCGTCGAGGTGTAGGAAATGCGGGCGAAACAAGCCCAAGATA
TGTTTGACGCAAAACTGTTGCAGCGGTTGCATCATTACACCCCAAACGAA
CCATTGTGACCCGCCCCTACTGTGTGTGTTTGTGTGCCCCGACAGATTGA
TTCTCCGGAAAAGTGGCGGGAGAACATGGAGATGGCGCTGGAGATGTTCA
AGGCGCAGAAGGCCACGATGCAGCAGGAGGCAGCGGACGAGGACAACGGT
GCCGCGGACGTTGACGACCTGGACGACGACTAA GCCAAGAATTTTTGTAG
CTTGTTTTAGGTTTTGATGTTTTGACGCCGGCGAGTAGGGGAGAGAGAGA
GCGAGACGCTTTACTGATAGTCCCAGCCTTTGTCGCTCTACGCAATTGAG
TAGATCGAGTCTTTCTCGCGGAGTATGGGAAACGGTTCAAAAAAAAGGCG
GGGTCGACCTTGTCTGACTTGATTTGTACCTGACAGGGGGAAGCCCGGGT
GGAGGTACCGGTGTCATTCACCGCCCGTCGGTTTCCGTTTCGCGTCGATT
CGGTTTGTGTGCGGCCGGGGCTGGAGACTGAAAACGTCTATGTTTTGTTG
TTTTTTCTCTAGTGCAGATAGAGCCACCACGCGCAGAAATGGCAGAGGGG
AAAAGGGGGGGCTGAAAGAGAAAGCGGCGACAGAGCAGTTGGCCTACCAG
TACATACCCGCGGCGAGATCTCTCTCGCGCTTAGGCACGAGGATGATGCT
GACGAGATGTGTGATGCACTGGCACATGTCCTTGGAAGGCGCCGCTGCGC
CGACTGACAAACAAACCTTCCGGTTTTTGCGTCGTTGTCCGGGAGTCCCA
TTTCTCTGGCGTGTCAGTAGGTTCCGTGTTTTTTTCTAACTCTCGCTCTG
CCCCAAAATTCGCTCTCGTTTGTCTTTGTTGAATGAGATACAACTGGGCC
AGGCAGGCGTGTTTGCCGTTGGTAGCTGCATCGGTTTCAGTGTTTTTTTC
GAGCGCGCAAGTTTGATTTGGGCACATTTCTGACTGGTGTGGTGCGCAAC
TCTGTTGCCGATATTGAACAAAAAAGGCAGATAAATGGACGACACCCTTG
AGAATCCTCTCGAGAGGTGGCTGTTTTAGAAAGCTTGTGCAAGCGAATCT
CAACAAACATTTCATCCCCCCCCCCGATTCCCTGCATTGTTAGCATTATT
TGCGCTTCGCCAA back to top Coding sequence (CDS) from alignment at C-linearis_contig101:211121..213633+
>mRNA_C-linearis_contig101.733.1 ID=mRNA_C-linearis_contig101.733.1|Name=mRNA_C-linearis_contig101.733.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at C-linearis_contig101:211121..213633+ (Chordaria linearis ClinC8C monoicous) back to top