Homology
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A6H5L2U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U5_9PHAE)
HSP 1 Score: 254 bits (648), Expect = 8.470e-79
Identity = 152/215 (70.70%), Postives = 166/215 (77.21%), Query Frame = 1
Query: 97 MRTTVALVLVEVLSVAGTCQGFVG-SSPRLTR----CSITRPASTSARGGSAPALLQMASG-----------AHVRISTALRAAGEDGAA--AAGMPEPPVEPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 687
MR + LVLV V+S A C F+ SSPRL+R CS TR T +R P+ ++ A+ A R STALR AG++G A GMP+PPVEP+ EKSNLPF+LDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDG KAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ
Sbjct: 1 MRAAITLVLVAVISAACPCLSFLRCSSPRLSRSGAPCS-TRSGPTGSRANIQPSCVKPAAALASWALAIRTTAGAR-STALRMAGDEGETEVAVGMPKPPVEPLQEKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 213
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
D7FSA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA6_ECTSI)
HSP 1 Score: 234 bits (596), Expect = 1.590e-71
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 1
Query: 280 STALRAAGEDG--AAAAGMPEPPVEPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 684
STALR AG++G A GMP+PPVEP EK+NLPF+LDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDG KAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE
Sbjct: 42 STALRIAGDEGDTEVAVGMPKPPVEPTQEKNNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 178
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A836CJ19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ19_9STRA)
HSP 1 Score: 150 bits (380), Expect = 2.510e-40
Identity = 74/109 (67.89%), Postives = 93/109 (85.32%), Query Frame = 1
Query: 358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 684
+K LPF+LDPSTRGGAVVVP LS+LLP+ AY LT+ G+DG KAG +V V Y L+G++ W G+YFFRVATKNMTYA QL++YEQAVI+KRF EL+E+EV+ALLDE++E
Sbjct: 8 KKGGLPFWLDPSTRGGAVVVPVLSVLLPIAAYFVLTSQGMDGLKAGNYVTVTYILLGMVGWAGTYFFRVATKNMTYAQQLRDYEQAVIQKRFEELQEDEVEALLDEIDE 116
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A7S3XNX5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNX5_HETAK)
HSP 1 Score: 118 bits (295), Expect = 4.060e-27
Identity = 61/124 (49.19%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 316 AAAGMPEPPVEPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 687
AAA PE + E++ LP+ L+P+T+GG++VV LSL+ P+GAY AL A G+D AG +VGVG+ ++ + W +Y FRVATK+MTYA QLK+YE AV+ KR EL+++EV AL++E+ +
Sbjct: 83 AAAAQPERAPDAF-ERAGLPWILNPNTKGGSLVVAALSLVFPVGAYYALQAGGMDELDAGRYVGVGFVVVSCVLWTATYLFRVATKDMTYAQQLKDYENAVLAKRLEELQDDEVQALIEEIERE 205
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A7S2YJT9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJT9_9STRA)
HSP 1 Score: 115 bits (287), Expect = 5.330e-26
Identity = 59/112 (52.68%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 346 EPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
EP PEK++LPF+LDP T+GGAVV+ + + P+ Y + AV +D + G +GVG+T++ L+ W+ +Y FRVATK+MTYA QLK+YE AVI KR EL+E+EV AL++EV
Sbjct: 93 EPPPEKTSLPFWLDPGTKGGAVVLTIVLFVAPIFLYNVILAVTDLDALEVGIDIGVGFTVLLLLGWMSTYIFRVATKDMTYAQQLKDYENAVIAKRLEELDEDEVQALVEEV 204
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A1E7FE16_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE16_9STRA)
HSP 1 Score: 110 bits (276), Expect = 1.720e-25
Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 1
Query: 361 KSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
KSNLPF+LDP TRGGAVV+ + ++P Y T+V G++G AG W+GVG+T + WV +Y FRVATK+MTYA QLK+YE AVI KR EL+++E A +
Sbjct: 12 KSNLPFWLDPGTRGGAVVLGIILFIVPFIGYAIATSVFGIEGVDAGKWIGVGFTAAATLVWVFTYIFRVATKDMTYAKQLKDYENAVIAKRLEELDDDEXQAXXXXI 118
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
B7FZY4_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZY4_PHATC)
HSP 1 Score: 112 bits (279), Expect = 3.250e-25
Identity = 55/108 (50.93%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
EK+ LPF+LDP T+GGAV + L P+ Y +T G D + G W+G+G+T++ + WV +Y FRVATK+MTYA QLK+YE AVI KR EL+E+E+ AL +EV
Sbjct: 68 EKTKLPFWLDPGTKGGAVFLSLALFLFPILVYSIMTTFFGFDEIETGKWIGIGFTVLATLGWVSTYLFRVATKDMTYAKQLKDYENAVIAKRLEELDEDEIQALQEEV 175
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A7S2KVF4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVF4_9STRA)
HSP 1 Score: 110 bits (276), Expect = 1.030e-24
Identity = 56/111 (50.45%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 687
EKSNLP +LDP T+GGA+V+ + ++P+ Y T V GVD +AG +GVG+++I ++ W +Y FRVATK+MTYA QLK+YE AVI KR EL+E+EV AL++++ +
Sbjct: 75 EKSNLPVFLDPGTKGGAIVLSLILFVIPIVIYQVATGVFGVDEIEAGRDIGVGFSVITMLLWGSTYIFRVATKDMTYAKQLKDYEDAVIAKRLEELDEDEVQALVEDIERE 185
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A7S4JE55_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE55_9STRA)
HSP 1 Score: 110 bits (275), Expect = 1.140e-24
Identity = 55/108 (50.93%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALT-AVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
E+ LP LDP T+GGA+ + + +LP+ Y +T G D +AG W+GVG+TL+ L+ WV +Y FRVATK+MTYA QLK+YE AVI KR EL+E+EV AL++++
Sbjct: 67 EEKKLPMLLDPGTKGGALFLSLVLFILPIIGYEIVTLGFGFDEIEAGRWIGVGFTLVTLVLWVSTYIFRVATKDMTYAKQLKDYENAVIAKRLEELDEDEVQALVEDI 174
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match:
A0A7S3B0A8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B0A8_9EUKA)
HSP 1 Score: 108 bits (270), Expect = 4.970e-24
Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTA-VGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
EKS+LPF LD T+GG V L ++LP AY +T + +D AG V VGY +G +AW GSY FRVA K+MTYA QLK+YE AVI+KRF EL EEEVDAL+ E+
Sbjct: 55 EKSSLPFILDIGTKGGIVFYSILGIVLPFVAYNIMTGPMELDIVLAGNVVLVGYVGLGTVAWTGSYVFRVANKDMTYAQQLKDYENAVIQKRFEELSEEEVDALMGEI 162
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 8.47e-79 / Id = 70.70 Expect = 1.59e-71 / Id = 89.78 Expect = 2.51e-40 / Id = 67.89 Expect = 4.06e-27 / Id = 49.19 Expect = 5.33e-26 / Id = 52.68 Expect = 1.72e-25 / Id = 52.34 Expect = 3.25e-25 / Id = 50.93 Expect = 1.03e-24 / Id = 50.45 Expect = 1.14e-24 / Id = 50.93 Expect = 4.97e-24 / Id = 56.48 Sequence A0A6H5L2U5_9PHAE D7FSA6_ECTSI A0A836CJ19_9STRA A0A7S3XNX5_HETAK A0A7S2YJT9_9STRA A0A1E7FE16_9STRA B7FZY4_PHATC A0A7S2KVF4_9STRA A0A7S4JE55_9STRA A0A7S3B0A8_9EUKA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig100.690.1
>prot_C-linearis_contig100.690.1 ID=prot_C-linearis_contig100.690.1|Name=mRNA_C-linearis_contig100.690.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=198bp
MRTTVALVLVEVLSVAGTCQGFVGSSPRLTRCSITRPASTSARGGSAPAL back to top mRNA from alignment at C-linearis_contig100:255557..259314+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig100.690.1 ID=mRNA_C-linearis_contig100.690.1|Name=mRNA_C-linearis_contig100.690.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3758bp|location=Sequence derived from alignment at C-linearis_contig100:255557..259314+ (Chordaria linearis ClinC8C monoicous)TTGGGATAATCCATACACCTTTGGCTCGCCTTGTAGCACTTCCTTCGCTT
TCCGCTGTACCGAACAAGAAACAGAGCACCCGCGACGCACAGAAAG ATGA
GGACGACGGTAGCGTTGGTTCTGGTGGAAGTTCTCTCGGTGGCCGGAACG
TGTCAGGGTTTCGTTGGGAGCAGCCCGCGTCTGACGAGATGTTCAATCAC
AAG GTGCCTGGCCTTGTTTGGCGGTTGCCTCGCCCAGCAGTCACGTGTCA
TGTAACACAGACCTCAATATTACGGACCTGTGCTAGACGTTTGGCTGCTC
TACTTTGGTGTCCACTGGCAGCAGTTGCTGGTTGAATCACTGCTGTGCTG
AGGGGGGGGGTTGCAGGGCCTCTGGCAGCACAGGAGGGATCGATCATGAA
AGCCTGGTTGCTGCGTTGGCGGATGTCTGTTGGTGGCGGGTGTTACCTAT
CTGACAGCATGCCACCATGACCTACAGGCTACGGGTATGTTTTGGCTGGG
TTGCTGTTGACGCCGCGTGATGCGAGCAAGCGCGGGTGTTGAATGTCGCA
GGGTTGCTGCAGGTTCGTTGTTGTATTAGACTACTACGAAGTAATCAACA
GACCAGCAGACCAGCAGGCCCAGCAGGCGGTGGAACTGACGGGATCAAAC
CTGTCACGGCATGCTTTTTAGCATACATAGGCGCGGCTTGTAACCTGTAG
CGAACTCGGTCAACCCAACTAGCTCCGTAAACCTGCGAGGGTTCAGATAT
ATGTAGCTCTGTTCTTTGTTGCTATACGAAGTATCGCTTTTCATCTTAGA
CGCCAGCCAAACTCAAACTTTCAATACCTACACTTCTGCAAGACACAGCA
CGTAGACTACCATGAGCACAATCCTCCTGACAAGGAAGCCGATACCACAG
CATCGCGTGTTGTCCATGCCACATCCAACATGTGTCCACGGACCATGGCC
TTTTTTGCTTTCCCCACGATGCACCCTTGCTTGGGGAAGTACCGCCTACG
GCGCTGCGTGATTGGCTGTGCAGCGCGTGTGGTTCCTAACCGGAAAACCG
CAAGCAACGGCGGTTCAACTCCGATGTTTACGGAAAATAAATACCAGGTT
TTAAGTCCAAATAAAACTGCGCGCGGCTCGTAGCTCGCGCGTCATAGCTT
TGTTTATTTCGCCCTCATTTGTTCTCATCGCTTCTACGGCACGCAAACAT
AGGCCAGCGTCCACTTCCGCCCGCGGTGGGTCAGCACCAGCACTACTGCA
AATGGCGAGCGGGGCACATGTACGAATTTCCACGGCGCTGAGGGCTGCTG
GGGAGGATGGGGCGGCGGCGGCGGGGATGCCAGAGCCTCCGGTGGAGCCA
GTGCCGGAGAAGAGCAACCTGCCGTTTTACCTCGACCCGAGCACAAG GCA
AGTCTACGTAGATCCCGTGTTTTCTTGTTTGTTTTTTGTTCCATCAGGAG
AAGCAGACAGGCTTGGGCAGGTGAGAAGAGAAGCAACCTGCTATTTTACC
TCCACCCGAGCACAGGGCAAGTGTAAGCTGAATCCCATTTGAAGCTGCCG
TGTTGGCCTTTGGTTTGTTCATTTTTCTTGGTCCAGAGGAGAAGCACAGA
GAGTCTTGGGGCTTGTTTTGGGCAGGATTCGTTTCAGGATAAGCCTCAGG
TTGCGGTTTTCTTCGATTTGGGTGGGGGTACTGCTGCTGTGTTGCGCACG
GTTTTTTTATTTTATTTTTTGGTCTTGTATCTTATGGTGCTTTGTGTCTT
CGCTTGTTCGTCATGCCCTACCTTTATTCGGAGGGTGGCGCTGTCTTGAT
TTTCGTGCACACCCTGTCATAAATCGTGTCTTGGTGCTGCTTCTCACCGT
ACCATCATCGCCTTCGCCATGGTATCGTCATCACCAGGGGGGGAGCAGTG
GTGGTGCCAACCCTGTCTCTGTTGCTGCCGCTCGGAGCATACGGGGCGCT
GACGGCCGTGGGAGTGGATGGAGGGAAAGCAG GTCTGTGTAATTGTTGGG
TGTGGTTGTTGGTGGTTGCGGTGGTGGTGGTGGTGGTGGTGGTGTCGTGT
GCCGTTTGACAACCATCCCGATCTACACTGTTTGCCATCCGTGCTCTGCT
TGTCAAACTGGCACGAACGCCTCACGAGAGAACAGCCTAGACACCCTAGA
GTTGTGTGCTTCGACAAGTGAGGCGATCGGCACGGCGGTTCGTTCTGAAG
TCTTTTGTCTCTTGTCGGTTTGGTTCTCAACTTTGTGTTGTTTTGGGCTT
TCGTTTCTCGTTTCGTCTCTGCTTGTGCTTCTACTTCTGCCGCGCAACAG
GTGCTTGGGTGGGCGTGGGGTACACCTTGATCGGGCTCATCGCGTGGGTA
GGCTCGTACTTCTTCAGAGTCGCCACGAAAAACATGACCTACGCCGTACA
G GTACGAGAGCTAGTCGCGGGCAATCATCGCTAATCATGGCATGTGATAG
CATGGCATGGCATGTTGGCAGGACTGCAGATCCAGAGTTCGGTTGAGGTC
CGTACGGTGCCTCGGAAACGTCAATAAGTGTGTTTGTGCATGCTGAGCTC
TGCTCCTTTACGAGGGGTTTCGGCGGGAAGCAACTCGCGCTTTCTCATTC
GCGCTTCGAAGCGAGTGGTGAAAGGGCAAATATCTTACTTGCTGATGTCG
TGTGCGCCTGTTCATTTCTGTCACGTAAGGTATACTCCCACGCCGTGCTG
TCACAGTCTCCAAGCCAACGCTTACTCATGATCGAGCGTTGAGCGCAGTT
GACAAACCAAGGCCATGGTGTTCGAAGAGAGCATTAGCTTCTGTTGCGTT
TGCCTTCGGTCTGTAATCTTTCCCTATCGTGCTTCTGCCCTGTCCGCCTT
GACCCCACCAATCCGATGTTGCAGCTCAAGAACTACGAGCAGGCGGTCAT
TGAGAAGCGGTTCAGCGAGCTAGAAGAGGAAGAGGTTGACGCCTTGCTCG
ACGAAGTAAACGAACAATAA CAATAACAATGACACATACCCCTGTCGGGT
CGATTTCGGGGCCCCTCCCAAGGCTTCGTTTCACGACGTAGATCCGTGCG
CTACACTGCCTCGGCTTGTGACAGTCTCTTCAAGAAGGGAGATTTTAGCA
AGAAGTTGACGCTTTGCTTGACCAGGTAAACGAGTAATACGACGAGCTCG
ATCAACGTTGCCCCCCAAGGGTTGCCTTGGGTAGAGCGTGCACTGCAGTA
TACACTACACTGCCTCGGCTAGGTCCTGCCGGCTAGGTCCTGCCGGCTAG
GTCTTGTCTCGTGTTTGAGCTTCAGGGGGAAAGTAGGAGACAGCAGACAG
GAGAGAGGCTCGAGAGAGGGGACTCCGCATTTGTGAAGAGGCGGGGGGTA
GCCAACCTAAGGAGGCCTGCTGCTGTGTTTTGGAAGGGCGGTGATCAAAT
TGTCGCGTGGCGTCGCACGAGCTCACGAGCTCTCATTGCTGCTCGTAACT
TGTGTAGCCTTCCGGTGACCTTTGTCGAGCTGAAAAAAGAAAAGAGGCGT
ACTCTCATCATTTTTTATCCCTCTCGCAGACAGGGGGCGTACTAAATGGA
GGAGGAAAAACATCTGGCGCGCAGATCGGTCTAAAATCGATCATGGACAG
AGAACTGTCACGCTTGACGTGGGTGTCGCCTGGAGCCCGGCACTTAGTTG
AGTTGAGGAATAATACACGAACGACACGTCCCATTGAGGTGCGCAATAAC
AAACTAGCAAGAGTTTGGAAGTGACACGTCCCATTGGAGGGCACGATAAT
AAACAAGC back to top Coding sequence (CDS) from alignment at C-linearis_contig100:255557..259314+
>mRNA_C-linearis_contig100.690.1 ID=mRNA_C-linearis_contig100.690.1|Name=mRNA_C-linearis_contig100.690.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at C-linearis_contig100:255557..259314+ (Chordaria linearis ClinC8C monoicous) back to top