mRNA_C-linearis_contig100.690.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A6H5L2U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U5_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 8.470e-79
Identity = 152/215 (70.70%), Postives = 166/215 (77.21%), Query Frame = 1

Query:   97 MRTTVALVLVEVLSVAGTCQGFVG-SSPRLTR----CSITRPASTSARGGSAPALLQMASG-----------AHVRISTALRAAGEDGAA--AAGMPEPPVEPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 687
            MR  + LVLV V+S A  C  F+  SSPRL+R    CS TR   T +R    P+ ++ A+            A  R STALR AG++G    A GMP+PPVEP+ EKSNLPF+LDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDG KAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ
Sbjct:    1 MRAAITLVLVAVISAACPCLSFLRCSSPRLSRSGAPCS-TRSGPTGSRANIQPSCVKPAAALASWALAIRTTAGAR-STALRMAGDEGETEVAVGMPKPPVEPLQEKSNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 213

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: D7FSA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA6_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.590e-71
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 1

Query:  280 STALRAAGEDG--AAAAGMPEPPVEPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 684
            STALR AG++G    A GMP+PPVEP  EK+NLPF+LDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDG KAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE
Sbjct:   42 STALRIAGDEGDTEVAVGMPKPPVEPTQEKNNLPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 178

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A836CJ19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ19_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.510e-40
Identity = 74/109 (67.89%), Postives = 93/109 (85.32%), Query Frame = 1

Query:  358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNE 684
            +K  LPF+LDPSTRGGAVVVP LS+LLP+ AY  LT+ G+DG KAG +V V Y L+G++ W G+YFFRVATKNMTYA QL++YEQAVI+KRF EL+E+EV+ALLDE++E
Sbjct:    8 KKGGLPFWLDPSTRGGAVVVPVLSVLLPIAAYFVLTSQGMDGLKAGNYVTVTYILLGMVGWAGTYFFRVATKNMTYAQQLRDYEQAVIQKRFEELQEDEVEALLDEIDE 116

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A7S3XNX5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNX5_HETAK)

HSP 1 Score: 118 bits (295), Expect = 4.060e-27
Identity = 61/124 (49.19%), Postives = 89/124 (71.77%), Query Frame = 1

Query:  316 AAAGMPEPPVEPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 687
            AAA  PE   +   E++ LP+ L+P+T+GG++VV  LSL+ P+GAY AL A G+D   AG +VGVG+ ++  + W  +Y FRVATK+MTYA QLK+YE AV+ KR  EL+++EV AL++E+  +
Sbjct:   83 AAAAQPERAPDAF-ERAGLPWILNPNTKGGSLVVAALSLVFPVGAYYALQAGGMDELDAGRYVGVGFVVVSCVLWTATYLFRVATKDMTYAQQLKDYENAVLAKRLEELQDDEVQALIEEIERE 205

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A7S2YJT9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJT9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.330e-26
Identity = 59/112 (52.68%), Postives = 83/112 (74.11%), Query Frame = 1

Query:  346 EPVPEKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
            EP PEK++LPF+LDP T+GGAVV+  +  + P+  Y  + AV  +D  + G  +GVG+T++ L+ W+ +Y FRVATK+MTYA QLK+YE AVI KR  EL+E+EV AL++EV
Sbjct:   93 EPPPEKTSLPFWLDPGTKGGAVVLTIVLFVAPIFLYNVILAVTDLDALEVGIDIGVGFTVLLLLGWMSTYIFRVATKDMTYAQQLKDYENAVIAKRLEELDEDEVQALVEEV 204

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A1E7FE16_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE16_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.720e-25
Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 1

Query:  361 KSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
            KSNLPF+LDP TRGGAVV+  +  ++P   Y   T+V G++G  AG W+GVG+T    + WV +Y FRVATK+MTYA QLK+YE AVI KR  EL+++E  A    +
Sbjct:   12 KSNLPFWLDPGTRGGAVVLGIILFIVPFIGYAIATSVFGIEGVDAGKWIGVGFTAAATLVWVFTYIFRVATKDMTYAKQLKDYENAVIAKRLEELDDDEXQAXXXXI 118

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: B7FZY4_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZY4_PHATC)

HSP 1 Score: 112 bits (279), Expect = 3.250e-25
Identity = 55/108 (50.93%), Postives = 75/108 (69.44%), Query Frame = 1

Query:  358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
            EK+ LPF+LDP T+GGAV +     L P+  Y  +T   G D  + G W+G+G+T++  + WV +Y FRVATK+MTYA QLK+YE AVI KR  EL+E+E+ AL +EV
Sbjct:   68 EKTKLPFWLDPGTKGGAVFLSLALFLFPILVYSIMTTFFGFDEIETGKWIGIGFTVLATLGWVSTYLFRVATKDMTYAKQLKDYENAVIAKRLEELDEDEIQALQEEV 175

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A7S2KVF4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVF4_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.030e-24
Identity = 56/111 (50.45%), Postives = 81/111 (72.97%), Query Frame = 1

Query:  358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTAV-GVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ 687
            EKSNLP +LDP T+GGA+V+  +  ++P+  Y   T V GVD  +AG  +GVG+++I ++ W  +Y FRVATK+MTYA QLK+YE AVI KR  EL+E+EV AL++++  +
Sbjct:   75 EKSNLPVFLDPGTKGGAIVLSLILFVIPIVIYQVATGVFGVDEIEAGRDIGVGFSVITMLLWGSTYIFRVATKDMTYAKQLKDYEDAVIAKRLEELDEDEVQALVEDIERE 185

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A7S4JE55_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE55_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.140e-24
Identity = 55/108 (50.93%), Postives = 77/108 (71.30%), Query Frame = 1

Query:  358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALT-AVGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
            E+  LP  LDP T+GGA+ +  +  +LP+  Y  +T   G D  +AG W+GVG+TL+ L+ WV +Y FRVATK+MTYA QLK+YE AVI KR  EL+E+EV AL++++
Sbjct:   67 EEKKLPMLLDPGTKGGALFLSLVLFILPIIGYEIVTLGFGFDEIEAGRWIGVGFTLVTLVLWVSTYIFRVATKDMTYAKQLKDYENAVIAKRLEELDEDEVQALVEDI 174

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BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Match: A0A7S3B0A8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B0A8_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 4.970e-24
Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 1

Query:  358 EKSNLPFYLDPSTRGGAVVVPTLSLLLPLGAYGALTA-VGVDGGKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEV 678
            EKS+LPF LD  T+GG V    L ++LP  AY  +T  + +D   AG  V VGY  +G +AW GSY FRVA K+MTYA QLK+YE AVI+KRF EL EEEVDAL+ E+
Sbjct:   55 EKSSLPFILDIGTKGGIVFYSILGIVLPFVAYNIMTGPMELDIVLAGNVVLVGYVGLGTVAWTGSYVFRVANKDMTYAQQLKDYENAVIQKRFEELSEEEVDALMGEI 162

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot

BLAST of mRNA_C-linearis_contig100.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5L2U5_9PHAE	8.470e-79	70.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FSA6_ECTSI	1.590e-71	89.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CJ19_9STRA	2.510e-40	67.89	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S3XNX5_HETAK	4.060e-27	49.19	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2YJT9_9STRA	5.330e-26	52.68	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A1E7FE16_9STRA	1.720e-25	52.34	Uncharacterized protein n=1 Tax=Fragilariopsis cyl...	[more]
B7FZY4_PHATC	3.250e-25	50.93	Predicted protein n=3 Tax=Phaeodactylum tricornutu...	[more]
A0A7S2KVF4_9STRA	1.030e-24	50.45	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
A0A7S4JE55_9STRA	1.140e-24	50.93	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S3B0A8_9EUKA	4.970e-24	56.48	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	232.3
Seed ortholog evalue	2e-58
Seed eggNOG ortholog	2880.D7FSA6
Hectar predicted targeting category	signal peptide
EggNOG free text desc.	Protein of unknown function (DUF3007)
EggNOG OGs	2CJ9H@1,2SA1G@2759
Ec32 ortholog description	Protein of unknown function DUF3007
Ec32 ortholog	Ec-05_000660.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	5
Model size	1478
Cds size	594
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927357.0988126-UTR-C-linearis_contig100:255556..255652	1622927357.0988126-UTR-C-linearis_contig100:255556..255652	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig100 255557..255652 +
1690879650.096111-UTR-C-linearis_contig100:255556..255652	1690879650.096111-UTR-C-linearis_contig100:255556..255652	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig100 255557..255652 +
1622927357.1875584-UTR-C-linearis_contig100:258526..259314	1622927357.1875584-UTR-C-linearis_contig100:258526..259314	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig100 258527..259314 +
1690879650.1540833-UTR-C-linearis_contig100:258526..259314	1690879650.1540833-UTR-C-linearis_contig100:258526..259314	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig100 258527..259314 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927357.1157348-CDS-C-linearis_contig100:255652..255759	1622927357.1157348-CDS-C-linearis_contig100:255652..255759	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 255653..255759 +
1690879650.1095662-CDS-C-linearis_contig100:255652..255759	1690879650.1095662-CDS-C-linearis_contig100:255652..255759	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 255653..255759 +
1622927357.129383-CDS-C-linearis_contig100:256758..256953	1622927357.129383-CDS-C-linearis_contig100:256758..256953	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 256759..256953 +
1690879650.117721-CDS-C-linearis_contig100:256758..256953	1690879650.117721-CDS-C-linearis_contig100:256758..256953	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 256759..256953 +
1622927357.1447716-CDS-C-linearis_contig100:257443..257538	1622927357.1447716-CDS-C-linearis_contig100:257443..257538	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 257444..257538 +
1690879650.1279683-CDS-C-linearis_contig100:257443..257538	1690879650.1279683-CDS-C-linearis_contig100:257443..257538	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 257444..257538 +
1622927357.1579561-CDS-C-linearis_contig100:257856..257957	1622927357.1579561-CDS-C-linearis_contig100:257856..257957	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 257857..257957 +
1690879650.1364877-CDS-C-linearis_contig100:257856..257957	1690879650.1364877-CDS-C-linearis_contig100:257856..257957	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 257857..257957 +
1622927357.1700351-CDS-C-linearis_contig100:258430..258526	1622927357.1700351-CDS-C-linearis_contig100:258430..258526	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 258431..258526 +
1690879650.1446576-CDS-C-linearis_contig100:258430..258526	1690879650.1446576-CDS-C-linearis_contig100:258430..258526	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig100 258431..258526 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig100.690.1	prot_C-linearis_contig100.690.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig100 255653..258526 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig100:255557..259314+
coding sequence from alignment at C-linearis_contig100:255557..259314+

protein sequence of mRNA_C-linearis_contig100.690.1

>prot_C-linearis_contig100.690.1 ID=prot_C-linearis_contig100.690.1|Name=mRNA_C-linearis_contig100.690.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=198bp
MRTTVALVLVEVLSVAGTCQGFVGSSPRLTRCSITRPASTSARGGSAPAL
LQMASGAHVRISTALRAAGEDGAAAAGMPEPPVEPVPEKSNLPFYLDPST
RGGAVVVPTLSLLLPLGAYGALTAVGVDGGKAGAWVGVGYTLIGLIAWVG
SYFFRVATKNMTYAVQLKNYEQAVIEKRFSELEEEEVDALLDEVNEQ*

mRNA from alignment at C-linearis_contig100:255557..259314+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig100.690.1 ID=mRNA_C-linearis_contig100.690.1|Name=mRNA_C-linearis_contig100.690.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3758bp|location=Sequence derived from alignment at C-linearis_contig100:255557..259314+ (Chordaria linearis ClinC8C monoicous)
TTGGGATAATCCATACACCTTTGGCTCGCCTTGTAGCACTTCCTTCGCTT
TCCGCTGTACCGAACAAGAAACAGAGCACCCGCGACGCACAGAAAGATGA
GGACGACGGTAGCGTTGGTTCTGGTGGAAGTTCTCTCGGTGGCCGGAACG
TGTCAGGGTTTCGTTGGGAGCAGCCCGCGTCTGACGAGATGTTCAATCAC
AAGGTGCCTGGCCTTGTTTGGCGGTTGCCTCGCCCAGCAGTCACGTGTCA
TGTAACACAGACCTCAATATTACGGACCTGTGCTAGACGTTTGGCTGCTC
TACTTTGGTGTCCACTGGCAGCAGTTGCTGGTTGAATCACTGCTGTGCTG
AGGGGGGGGGTTGCAGGGCCTCTGGCAGCACAGGAGGGATCGATCATGAA
AGCCTGGTTGCTGCGTTGGCGGATGTCTGTTGGTGGCGGGTGTTACCTAT
CTGACAGCATGCCACCATGACCTACAGGCTACGGGTATGTTTTGGCTGGG
TTGCTGTTGACGCCGCGTGATGCGAGCAAGCGCGGGTGTTGAATGTCGCA
GGGTTGCTGCAGGTTCGTTGTTGTATTAGACTACTACGAAGTAATCAACA
GACCAGCAGACCAGCAGGCCCAGCAGGCGGTGGAACTGACGGGATCAAAC
CTGTCACGGCATGCTTTTTAGCATACATAGGCGCGGCTTGTAACCTGTAG
CGAACTCGGTCAACCCAACTAGCTCCGTAAACCTGCGAGGGTTCAGATAT
ATGTAGCTCTGTTCTTTGTTGCTATACGAAGTATCGCTTTTCATCTTAGA
CGCCAGCCAAACTCAAACTTTCAATACCTACACTTCTGCAAGACACAGCA
CGTAGACTACCATGAGCACAATCCTCCTGACAAGGAAGCCGATACCACAG
CATCGCGTGTTGTCCATGCCACATCCAACATGTGTCCACGGACCATGGCC
TTTTTTGCTTTCCCCACGATGCACCCTTGCTTGGGGAAGTACCGCCTACG
GCGCTGCGTGATTGGCTGTGCAGCGCGTGTGGTTCCTAACCGGAAAACCG
CAAGCAACGGCGGTTCAACTCCGATGTTTACGGAAAATAAATACCAGGTT
TTAAGTCCAAATAAAACTGCGCGCGGCTCGTAGCTCGCGCGTCATAGCTT
TGTTTATTTCGCCCTCATTTGTTCTCATCGCTTCTACGGCACGCAAACAT
AGGCCAGCGTCCACTTCCGCCCGCGGTGGGTCAGCACCAGCACTACTGCA
AATGGCGAGCGGGGCACATGTACGAATTTCCACGGCGCTGAGGGCTGCTG
GGGAGGATGGGGCGGCGGCGGCGGGGATGCCAGAGCCTCCGGTGGAGCCA
GTGCCGGAGAAGAGCAACCTGCCGTTTTACCTCGACCCGAGCACAAGGCA
AGTCTACGTAGATCCCGTGTTTTCTTGTTTGTTTTTTGTTCCATCAGGAG
AAGCAGACAGGCTTGGGCAGGTGAGAAGAGAAGCAACCTGCTATTTTACC
TCCACCCGAGCACAGGGCAAGTGTAAGCTGAATCCCATTTGAAGCTGCCG
TGTTGGCCTTTGGTTTGTTCATTTTTCTTGGTCCAGAGGAGAAGCACAGA
GAGTCTTGGGGCTTGTTTTGGGCAGGATTCGTTTCAGGATAAGCCTCAGG
TTGCGGTTTTCTTCGATTTGGGTGGGGGTACTGCTGCTGTGTTGCGCACG
GTTTTTTTATTTTATTTTTTGGTCTTGTATCTTATGGTGCTTTGTGTCTT
CGCTTGTTCGTCATGCCCTACCTTTATTCGGAGGGTGGCGCTGTCTTGAT
TTTCGTGCACACCCTGTCATAAATCGTGTCTTGGTGCTGCTTCTCACCGT
ACCATCATCGCCTTCGCCATGGTATCGTCATCACCAGGGGGGGAGCAGTG
GTGGTGCCAACCCTGTCTCTGTTGCTGCCGCTCGGAGCATACGGGGCGCT
GACGGCCGTGGGAGTGGATGGAGGGAAAGCAGGTCTGTGTAATTGTTGGG
TGTGGTTGTTGGTGGTTGCGGTGGTGGTGGTGGTGGTGGTGGTGTCGTGT
GCCGTTTGACAACCATCCCGATCTACACTGTTTGCCATCCGTGCTCTGCT
TGTCAAACTGGCACGAACGCCTCACGAGAGAACAGCCTAGACACCCTAGA
GTTGTGTGCTTCGACAAGTGAGGCGATCGGCACGGCGGTTCGTTCTGAAG
TCTTTTGTCTCTTGTCGGTTTGGTTCTCAACTTTGTGTTGTTTTGGGCTT
TCGTTTCTCGTTTCGTCTCTGCTTGTGCTTCTACTTCTGCCGCGCAACAG
GTGCTTGGGTGGGCGTGGGGTACACCTTGATCGGGCTCATCGCGTGGGTA
GGCTCGTACTTCTTCAGAGTCGCCACGAAAAACATGACCTACGCCGTACA
GGTACGAGAGCTAGTCGCGGGCAATCATCGCTAATCATGGCATGTGATAG
CATGGCATGGCATGTTGGCAGGACTGCAGATCCAGAGTTCGGTTGAGGTC
CGTACGGTGCCTCGGAAACGTCAATAAGTGTGTTTGTGCATGCTGAGCTC
TGCTCCTTTACGAGGGGTTTCGGCGGGAAGCAACTCGCGCTTTCTCATTC
GCGCTTCGAAGCGAGTGGTGAAAGGGCAAATATCTTACTTGCTGATGTCG
TGTGCGCCTGTTCATTTCTGTCACGTAAGGTATACTCCCACGCCGTGCTG
TCACAGTCTCCAAGCCAACGCTTACTCATGATCGAGCGTTGAGCGCAGTT
GACAAACCAAGGCCATGGTGTTCGAAGAGAGCATTAGCTTCTGTTGCGTT
TGCCTTCGGTCTGTAATCTTTCCCTATCGTGCTTCTGCCCTGTCCGCCTT
GACCCCACCAATCCGATGTTGCAGCTCAAGAACTACGAGCAGGCGGTCAT
TGAGAAGCGGTTCAGCGAGCTAGAAGAGGAAGAGGTTGACGCCTTGCTCG
ACGAAGTAAACGAACAATAACAATAACAATGACACATACCCCTGTCGGGT
CGATTTCGGGGCCCCTCCCAAGGCTTCGTTTCACGACGTAGATCCGTGCG
CTACACTGCCTCGGCTTGTGACAGTCTCTTCAAGAAGGGAGATTTTAGCA
AGAAGTTGACGCTTTGCTTGACCAGGTAAACGAGTAATACGACGAGCTCG
ATCAACGTTGCCCCCCAAGGGTTGCCTTGGGTAGAGCGTGCACTGCAGTA
TACACTACACTGCCTCGGCTAGGTCCTGCCGGCTAGGTCCTGCCGGCTAG
GTCTTGTCTCGTGTTTGAGCTTCAGGGGGAAAGTAGGAGACAGCAGACAG
GAGAGAGGCTCGAGAGAGGGGACTCCGCATTTGTGAAGAGGCGGGGGGTA
GCCAACCTAAGGAGGCCTGCTGCTGTGTTTTGGAAGGGCGGTGATCAAAT
TGTCGCGTGGCGTCGCACGAGCTCACGAGCTCTCATTGCTGCTCGTAACT
TGTGTAGCCTTCCGGTGACCTTTGTCGAGCTGAAAAAAGAAAAGAGGCGT
ACTCTCATCATTTTTTATCCCTCTCGCAGACAGGGGGCGTACTAAATGGA
GGAGGAAAAACATCTGGCGCGCAGATCGGTCTAAAATCGATCATGGACAG
AGAACTGTCACGCTTGACGTGGGTGTCGCCTGGAGCCCGGCACTTAGTTG
AGTTGAGGAATAATACACGAACGACACGTCCCATTGAGGTGCGCAATAAC
AAACTAGCAAGAGTTTGGAAGTGACACGTCCCATTGGAGGGCACGATAAT
AAACAAGC

Coding sequence (CDS) from alignment at C-linearis_contig100:255557..259314+

>mRNA_C-linearis_contig100.690.1 ID=mRNA_C-linearis_contig100.690.1|Name=mRNA_C-linearis_contig100.690.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at C-linearis_contig100:255557..259314+ (Chordaria linearis ClinC8C monoicous)
ATGAGGACGACGGTAGCGTTGGTTCTGGTGGAAGTTCTCTCGGTGGCCGG
AACGTGTCAGGGTTTCGTTGGGAGCAGCCCGCGTCTGACGAGATGTTCAA
TCACAAGATGAGGACGACGGTAGCGTTGGTTCTGGTGGAAGTTCTCTCGG
TGGCCGGAACGTGTCAGGGTTTCGTTGGGAGCAGCCCGCGTCTGACGAGA
TGTTCAATCACAAGGCCAGCGTCCACTTCCGCCCGCGGTGGGTCAGCACC
AGCACTACTGCAAATGGCGAGCGGGGCACATGTACGAATTTCCACGGCGC
TGAGGGCTGCTGGGGAGGATGGGGCGGCGGCGGCGGGGATGCCAGAGCCT
CCGGTGGAGCCAGTGCCGGAGAAGAGCAACCTGCCGTTTTACCTCGACCC
GAGCACAAGGCCAGCGTCCACTTCCGCCCGCGGTGGGTCAGCACCAGCAC
TACTGCAAATGGCGAGCGGGGCACATGTACGAATTTCCACGGCGCTGAGG
GCTGCTGGGGAGGATGGGGCGGCGGCGGCGGGGATGCCAGAGCCTCCGGT
GGAGCCAGTGCCGGAGAAGAGCAACCTGCCGTTTTACCTCGACCCGAGCA
CAAGGGGGGGAGCAGTGGTGGTGCCAACCCTGTCTCTGTTGCTGCCGCTC
GGAGCATACGGGGCGCTGACGGCCGTGGGAGTGGATGGAGGGAAAGCAGG
GGGGGAGCAGTGGTGGTGCCAACCCTGTCTCTGTTGCTGCCGCTCGGAGC
ATACGGGGCGCTGACGGCCGTGGGAGTGGATGGAGGGAAAGCAGGTGCTT
GGGTGGGCGTGGGGTACACCTTGATCGGGCTCATCGCGTGGGTAGGCTCG
TACTTCTTCAGAGTCGCCACGAAAAACATGACCTACGCCGTACAGGTGCT
TGGGTGGGCGTGGGGTACACCTTGATCGGGCTCATCGCGTGGGTAGGCTC
GTACTTCTTCAGAGTCGCCACGAAAAACATGACCTACGCCGTACAGCTCA
AGAACTACGAGCAGGCGGTCATTGAGAAGCGGTTCAGCGAGCTAGAAGAG
GAAGAGGTTGACGCCTTGCTCGACGAAGTAAACGAACAATAACTCAAGAA
CTACGAGCAGGCGGTCATTGAGAAGCGGTTCAGCGAGCTAGAAGAGGAAG
AGGTTGACGCCTTGCTCGACGAAGTAAACGAACAATAA