mRNA_C-linearis_contig10.588.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.588.1

>prot_C-linearis_contig10.588.1 ID=prot_C-linearis_contig10.588.1|Name=mRNA_C-linearis_contig10.588.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=606bp
MDLASSGAEIAQLPGKTERFIVIQQGRRTVRHSWKRQREKVLVTSALLRV
DGRECGGLIRSSIANDLATLSSTCDAHATVIQDRADQKSHSRAAGAAPAS
AAGRKRGRLEVSGSSAVLEAASPLPPRRGRQAQSGLAGSARSARSTVSLR
QADSSSEGAAPSGGTGAAAGGALTAADIQSALDANPALLGELGLVQARSD
SEMAAAAAEVVELKAKLGKVEEDAKVHAATIMEIIASLASLRENTQFELG
RMVYQAVLSVVAGTGGRSFGVTAERRAESLNIRPNTFRDAQARMCNARHD
LPPQTALDKGVYVYNRRKIRSDITLPEILALARQFWHTDDVSRASGNSGD
RDMWRESKAWDAPGHPRRQINIEGGGDEVYRRFLEWPEYLAFKAERAARG
EVVQDPGRTVFLETRCPCLVMPKIQQCACQIHTQQQLYLTALKMYLKAMH
PGGCKCECAWCKIGCSQWVHMCENLGNFSQYLACDKVDLLGGDAEGTGVY
MGRKPACAAFWRAQVVGSTTTAASPSALLGTSGDACGGVDTVRRHDPGER
DGGEEAAGAGAGHIERAVDRVPGAHEKVHGPPRHRQVAAQLPQAQFGRVA
AGRPF*
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mRNA from alignment at C-linearis_contig10:2713207..2717195-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.588.1 ID=mRNA_C-linearis_contig10.588.1|Name=mRNA_C-linearis_contig10.588.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3989bp|location=Sequence derived from alignment at C-linearis_contig10:2713207..2717195- (Chordaria linearis ClinC8C monoicous)
TTCCGGGGTCGTCCGACGGTAGAAATCGCGATTTTTTTGTTTTCGATTTG CGGGTGCAATTTTTAGCCGATTTCAAATCTGAAACCTACTATGTTCAGCA TGTACCGAGATCTATCAGATCACCAAAGATCAAATCGTGATTCCAATTCC TTCATGCCGAACCCGCGTACCCCCAAAACGCGGCGAGATCAAAATGAGCA TAATCCACCTCGAATCACACTTCGATCCTTGCGCCACGCGATCCGGCGTG GCTGATTTACTGGGGTAGAACACAACTTTGTCGCGATCGGACACGAACTC CACCTGCGGCGGGGCCATGGATTTAGCCTCTTCTGGCGCCGAAATCGCTC AACTTCCCGGGAAGACGGAGAGATTCATCGTGATCCAGCAGGGCCGCCGT ACAGTGCGACACTCGTGGAAGCGGCAACGCGAGAAGGTGCTGGTGACGTC TGCACTGCTGAGGGTAGATGGCAGGGAGTGCGGTGGCCTCATCCGCTCGT CTATCGCCAACGATTTGGCGACGCTTTCCAGCACATGCGATGCGCATGCT ACCGTGATACAGGACCGTGCGGACCAGAAATCCCACTCGAGGGCTGCCGG TGCGGCTCCTGCTTCTGCCGCTGGCCGCAAGCGAGGGAGACTCGAGGTCA GCGGTTCTAGCGCTGTTCTCGAGGCTGCTTCTCCACTACCGCCGAGAAGA GGCCGGCAAGCGCAGGTATGTCGTGTGTTGGTAGCTCGTTGTGCAGCCGC AGTGAACTGCAGCGCGGTATATTTTTGTAATTGTTCTTGATCGCGCCGAC CTCGTGTACTCCACTACAGGCAGCAGTCTATGTACAGCAATCATGCTGTT GCGTACTGAACGTGTGCCAACAAGTGTGTTCCTCTGGCGGGGATGCGTGC AGTGCTGTTGCTACTGCTGCGTCCTTCCCGTCGGCCAGCTGGGCTCATGA TAATTGCACAAAATGGATGCATCGTGATGGAGTGTAAAATCGTAGAATCG GAGCTGAGTTCTTACCGCATGAACCCACTGTTGAACACACAGCACAATAC ACACAGCAAAACACGTCATTTGATCCGTGTCCCTGCTCTCGACTTACCCC CGTCCCGATCAATCATCAGCAGAGCGGACTAGCTGGCAGCGCCAGGTCTG CGAGATCTACGGTTTCTCTGCGTCAAGCGGACAGCAGCAGCGAGGGAGCG GCGCCGAGCGGAGGTACCGGCGCCGCGGCGGGAGGGGCGCTCACGGCAGC TGATATCCAATCTGCGCTTGATGCGAACCCAGCCCTGCTGGGGGAGTTGG GGTTGGTGCAGGCCAGAAGCGATTCGGAGATGGCGGCGGCTGCTGCTGAG GTGGTGGAGTTAAAAGCGAAGTTGGGCAAGGTGGAGGAGGACGCCAAGGT GCACGCTGCGACGATCATGGAGATCATCGCGTCGCTCGCATCGTTGCGAG AGAACACGCAGTTCGAGCTTGGCCGCATGGTGTACCAAGCCGTGCTCTCT GTGGTAGCGGGGACGGGGGGTCGGTCATTCGGTGTAACTGCCGAAAGGCG GGCAGAGAGCCTCAACATTCGTCCGAACACCTTTCGTGACGCGCAAGCAC GGATGTGCAACGCGCGGCATGACCTACCCCCACAGACGGCTCTCGATAAA GGCGTGTACGTGTACAACCGGAGGAAGATCAGGAGCGACATCACGCTCCC GGAGATTCTGGCCCTCGCACGCCAGTTTTGGCACACAGACGACGTCTCTC GTGCTTCCGGCAACTCAGGTATATTGCACAACAAAAAAAAATGCCAGCGG TGCAACCAACTTGTTGCTTTCGAGTACATAGTCCGTCACGCAATCAAGTT GTTTTCGTTTGACCTGTTGGGGAGCCTAAAACTTTACGGCGCCACACCCT CTCGCTACCTTCGAACGTACGAATCAACAGGTGACAGGGACATGTGGAGG GAATCCAAGGCATGGGACGCTCCTGGTCACCCTCGAAGACAGATCAACAT CGAGGGTGGTGGAGACGAGGTCTACAGGCGATTCCTCGAGTGGCCCGAGT ACCTGGCCTTCAAGGCAGAGCGCGCAGCAAGAGGGGAAGTCGTGCAAGAT CCCGGCCGCACCGTGTTCTTGGAGACTCGGTGCCCGTGCCTAGGTATGGA AGTTCCGTTCGAGTAAGCCCTTTGTTTCTGTTGCTTGTGCTGGTTCAGAC GGGCGCTCTTCTTGCACTGCTAGCAATCGTTTTGGGCTTCGTCGGTCTAA TATTTGTTCTCGAAAAGATCTCCGTTCCGCTTCGCTCCACTCCGTTTTTT TTTGAAATGTAAACTTATGCAAAGACCACCTTTGTATTTAAGAAGTGACA CAGGTCCTTTTGCGCCTCCTCTCCTTTGTCGTCCCCAGTGATGCCCAAAA TCCAGCAGTGCGCGTGCCAGATACACACCCAGCAGCAGCTGTACCTCACA GCACTGAAGATGTACTTGAAGGCGATGCACCCGGGAGGGTGCAAGTGCGA GTGTGCCTGGTGTAAGATCGGTTGCTCGCAGTGGGTGCACATGTGCGAGA ACCTGGGGAATTTTTCGCAGTACTTAGCATGTGATAAGGTAGACTTACTT GGTGGGGATGCGGAGGGCACGGGCGTGTACATGGGGAGGAAGCCTGCGTG CGCAGCTTTTTGGCGTGCGCAAGTTGTGGGTTCGACAACGACGGCGGCAT CCCCAAGTGCTCTGCTTGGGACGAGTGGGGACGCGTGCGGTGGGGTGGAT ACGGTTCGAAGACATGACCCTGGAGAGCGGGACGGAGGTGAAGAAGCAGC AGGTGCCGGTGCAGGGCACATTGAACGAGCTGTGGACAGAGTTCCGGGCG CACACGAAAAAGGCGAGCTCTTGTTTGTGGCCCAGCGGATAACTTCTTCT TTTTCTGTCGTTGCATGTTGAACATTCAATGGCAGCAGCAGATTCGCACG GTTGGCCTTCCTCCGGGTCGCAGCACTTGTTTCTTTCTCGCGAACCTTTT TGTTTGTTTTGTCTGCGAAAGAACATGTCACCACCTGACTTTCTGGCATG CCGTCTCGCCTCCTGTCTCCCGCTCTTTTTCTTGTGTGGTATTGTCAGTA CATGGCCCACCACGCCATCGCCAAGTGGCAGCGCAACTCCCACAAGCTCA GTTTGGGCGCGTTGCGGCAGGGCGACCTTTTTGATCGAGACGGACTTCAT CGAGAAGTACAAGTGCCAAGCGGGGTCCACGGGGACTTGCGAGACTACAC CGTCCGTCACCCTCATGGTGGCGATCGTGCACCACAGCCCCGACGACTTC GGCCGACACAAGACCGAGGCCTGGATTTTCGTTTCGAGCGAGAAGAAGCA CGACTTCGACTTCCATGCGCACGCCCTCAGGCAGATAGTGGAGTACTACA CTACAGGGGGTGGCAAGGCAGCAACTGCCCCTCCGGCAGGCTTTGTTGGA GTATTCGTTCCTCTGGTCTGCATATGGACGGATGGATGTGCGCATCAGTA CAAAGGCAAGAAGAATTTCCGGCTCATCGCGAACTGCAGAGAAGAGCTTT GTGGGGTCAAGATCGTGCACAACTTCGCTGCGACGTCACACTTCAAAGGC CCGCATGACGGACTTGGCGGCGTGGCGAAAAACATGATGCGTCGGGCGGA GCTCAACACAGACTACGCCCGGCGCATTCACAACGCGAAGGCTGCGTACG AGTTCCTGGAGGAGAAGATGGGACGGAAAACGCATGAAGACTCGGAGGCC TTCTTCGCGTCGTGGTCTCCGTACAGGATCAGGAAGACGCACGTCATCTG GATTCCGTTTGGGGCGATTCGCCGCCCGGAGATCAACCTGGATGGCATCG TCGGCACCCGCTCCCTGTACCAGTTCCACGGAGGCCTGAAGACCAACCGT GACGCAGCCGCTCAGTTGGACGATGGGGGTGCGATAACGGCGACTACCGC AGCAGTGGTACCAGAGACGAGGGGTCTAATCGTGGGGGG
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Coding sequence (CDS) from alignment at C-linearis_contig10:2713207..2717195-

>mRNA_C-linearis_contig10.588.1 ID=mRNA_C-linearis_contig10.588.1|Name=mRNA_C-linearis_contig10.588.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3636bp|location=Sequence derived from alignment at C-linearis_contig10:2713207..2717195- (Chordaria linearis ClinC8C monoicous)
ATGGATTTAGCCTCTTCTGGCGCCGAAATCGCTCAACTTCCCGGGAAGAC
GGAGAGATTCATCGTGATCCAGCAGGGCCGCCGTACAGTGCGACACTCGT
GGAAGCGGCAACGCGAGAAGGTGCTGGTGACGTCTGCACTGCTGAGGGTA
GATGGCAGGGAGTGCGGTGGCCTCATCCGCTCGTCTATCGCCAACGATTT
GGCGACGCTTTCCAGCACATGCGATGCGCATGCTACCGTGATACAGGACC
GTGCGGACCAGAAATCCCACTCGAGGGCTGCCGGTGCGGCTCCTGCTTCT
GCCGCTGGCCGCAAGCGAGGGAGACTCGAGGTCAGCGGTTCTAGCGCTGT
TCTCGAGGCTGCTTCTCCACTACCGCCGAGAAGAGGCCGGCAAGCGCAGA
TGGATTTAGCCTCTTCTGGCGCCGAAATCGCTCAACTTCCCGGGAAGACG
GAGAGATTCATCGTGATCCAGCAGGGCCGCCGTACAGTGCGACACTCGTG
GAAGCGGCAACGCGAGAAGGTGCTGGTGACGTCTGCACTGCTGAGGGTAG
ATGGCAGGGAGTGCGGTGGCCTCATCCGCTCGTCTATCGCCAACGATTTG
GCGACGCTTTCCAGCACATGCGATGCGCATGCTACCGTGATACAGGACCG
TGCGGACCAGAAATCCCACTCGAGGGCTGCCGGTGCGGCTCCTGCTTCTG
CCGCTGGCCGCAAGCGAGGGAGACTCGAGGTCAGCGGTTCTAGCGCTGTT
CTCGAGGCTGCTTCTCCACTACCGCCGAGAAGAGGCCGGCAAGCGCAGAG
CGGACTAGCTGGCAGCGCCAGGTCTGCGAGATCTACGGTTTCTCTGCGTC
AAGCGGACAGCAGCAGCGAGGGAGCGGCGCCGAGCGGAGGTACCGGCGCC
GCGGCGGGAGGGGCGCTCACGGCAGCTGATATCCAATCTGCGCTTGATGC
GAACCCAGCCCTGCTGGGGGAGTTGGGGTTGGTGCAGGCCAGAAGCGATT
CGGAGATGGCGGCGGCTGCTGCTGAGGTGGTGGAGTTAAAAGCGAAGTTG
GGCAAGGTGGAGGAGGACGCCAAGGTGCACGCTGCGACGATCATGGAGAT
CATCGCGTCGCTCGCATCGTTGCGAGAGAACACGCAGTTCGAGCTTGGCC
GCATGGTGTACCAAGCCGTGCTCTCTGTGGTAGCGGGGACGGGGGGTCGG
TCATTCGGTGTAACTGCCGAAAGGCGGGCAGAGAGCCTCAACATTCGTCC
GAACACCTTTCGTGACGCGCAAGCACGGATGTGCAACGCGCGGCATGACC
TACCCCCACAGACGGCTCTCGATAAAGGCGTGTACGTGTACAACCGGAGG
AAGATCAGGAGCGACATCACGCTCCCGGAGATTCTGGCCCTCGCACGCCA
GTTTTGGCACACAGACGACGTCTCTCGTGCTTCCGGCAACTCAGAGCGGA
CTAGCTGGCAGCGCCAGGTCTGCGAGATCTACGGTTTCTCTGCGTCAAGC
GGACAGCAGCAGCGAGGGAGCGGCGCCGAGCGGAGGTACCGGCGCCGCGG
CGGGAGGGGCGCTCACGGCAGCTGATATCCAATCTGCGCTTGATGCGAAC
CCAGCCCTGCTGGGGGAGTTGGGGTTGGTGCAGGCCAGAAGCGATTCGGA
GATGGCGGCGGCTGCTGCTGAGGTGGTGGAGTTAAAAGCGAAGTTGGGCA
AGGTGGAGGAGGACGCCAAGGTGCACGCTGCGACGATCATGGAGATCATC
GCGTCGCTCGCATCGTTGCGAGAGAACACGCAGTTCGAGCTTGGCCGCAT
GGTGTACCAAGCCGTGCTCTCTGTGGTAGCGGGGACGGGGGGTCGGTCAT
TCGGTGTAACTGCCGAAAGGCGGGCAGAGAGCCTCAACATTCGTCCGAAC
ACCTTTCGTGACGCGCAAGCACGGATGTGCAACGCGCGGCATGACCTACC
CCCACAGACGGCTCTCGATAAAGGCGTGTACGTGTACAACCGGAGGAAGA
TCAGGAGCGACATCACGCTCCCGGAGATTCTGGCCCTCGCACGCCAGTTT
TGGCACACAGACGACGTCTCTCGTGCTTCCGGCAACTCAGGTGACAGGGA
CATGTGGAGGGAATCCAAGGCATGGGACGCTCCTGGTCACCCTCGAAGAC
AGATCAACATCGAGGGTGGTGGAGACGAGGTCTACAGGCGATTCCTCGAG
TGGCCCGAGTACCTGGCCTTCAAGGCAGAGCGCGCAGCAAGAGGGGAAGT
CGTGCAAGATCCCGGCCGCACCGTGTTCTTGGAGACTCGGTGCCCGTGCC
TAGGTGACAGGGACATGTGGAGGGAATCCAAGGCATGGGACGCTCCTGGT
CACCCTCGAAGACAGATCAACATCGAGGGTGGTGGAGACGAGGTCTACAG
GCGATTCCTCGAGTGGCCCGAGTACCTGGCCTTCAAGGCAGAGCGCGCAG
CAAGAGGGGAAGTCGTGCAAGATCCCGGCCGCACCGTGTTCTTGGAGACT
CGGTGCCCGTGCCTAGTGATGCCCAAAATCCAGCAGTGCGCGTGCCAGAT
ACACACCCAGCAGCAGCTGTACCTCACAGCACTGAAGATGTACTTGAAGG
CGATGCACCCGGGAGGGTGCAAGTGCGAGTGTGCCTGGTGTAAGATCGGT
TGCTCGCAGTGGGTGCACATGTGCGAGAACCTGGGGAATTTTTCGCAGTA
CTTAGCATGTGATAAGGTAGACTTACTTGGTGGGGATGCGGAGGGCACGG
GCGTGTACATGGGGAGGAAGCCTGCGTGCGCAGCTTTTTGGCGTGCGCAA
GTTGTGGGTTCGACAACGACGGCGGCATCCCCAAGTGCTCTGCTTGGGAC
GAGTGGGGACGCGTGCGGTGGGGTGGATACGGTTCGAAGACATGACCCTG
GAGAGCGGGACGGAGGTGAAGAAGCAGCAGGTGCCGGTGCAGGGCACATT
GAACGAGCTGTGGACAGAGTTCCGGGCGCACACGAAAAAGTGATGCCCAA
AATCCAGCAGTGCGCGTGCCAGATACACACCCAGCAGCAGCTGTACCTCA
CAGCACTGAAGATGTACTTGAAGGCGATGCACCCGGGAGGGTGCAAGTGC
GAGTGTGCCTGGTGTAAGATCGGTTGCTCGCAGTGGGTGCACATGTGCGA
GAACCTGGGGAATTTTTCGCAGTACTTAGCATGTGATAAGGTAGACTTAC
TTGGTGGGGATGCGGAGGGCACGGGCGTGTACATGGGGAGGAAGCCTGCG
TGCGCAGCTTTTTGGCGTGCGCAAGTTGTGGGTTCGACAACGACGGCGGC
ATCCCCAAGTGCTCTGCTTGGGACGAGTGGGGACGCGTGCGGTGGGGTGG
ATACGGTTCGAAGACATGACCCTGGAGAGCGGGACGGAGGTGAAGAAGCA
GCAGGTGCCGGTGCAGGGCACATTGAACGAGCTGTGGACAGAGTTCCGGG
CGCACACGAAAAAGTACATGGCCCACCACGCCATCGCCAAGTGGCAGCGC
AACTCCCACAAGCTCAGTTTGGGCGCGTTGCGGCAGGGCGACCTTTTTGA
TACATGGCCCACCACGCCATCGCCAAGTGGCAGCGCAACTCCCACAAGCT
CAGTTTGGGCGCGTTGCGGCAGGGCGACCTTTTTGA
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