mRNA_C-linearis_contig10.534.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig10.534.1 vs. uniprot
Match: D7FZW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW0_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 6.950e-46
Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 1

Query:   10 GGSAKKRGRGGWKKDYTVIASVESKAGEAAA--AAAGWFVNGDARYACYEELPADMRPHVGDVLAFKTLSLNEETWTPELSSYRTAEVSAFDTASGMVRLFPVFLEDSDRE 336
            GGSAKKRGRGGWKKDY VIASVESKAGEAAA  AAAG   NGDARY  YEELP DMRP V DVLAFKTLSLNEETWTPELS YRTAEV+AFDT+SG+VRL P  +ED +++
Sbjct:  131 GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENGDARYVVYEELPTDMRPQVCDVLAFKTLSLNEETWTPELSPYRTAEVTAFDTSSGLVRLLPASIEDDNKD 241

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BLAST of mRNA_C-linearis_contig10.534.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 9.500e-42
Identity = 86/114 (75.44%), Postives = 91/114 (79.82%), Query Frame = 1

Query:   10 GGSAKKRGRGGWKKDYTVIASVESKAGEAAA--AAAGWFVNGDARYACYEELPADMRPHVGDVLAFKTLSLNEETWTPELSSYRTAEVSAFDTASGMVRLFPVFLEDSDREANG 345
            GGSAKKRGRGGWKKDY VIASVESKAGEAAA  AAAG   N DARY  YEELP DMRP V DVLAFKTLSLNEETWTPELS YR AEV AFD +SG+VRL P   ED +++  G
Sbjct:  592 GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASTEDDNKDGGG 705

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.534.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2

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POSITION

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Match Name	E-value	Identity	Description
D7FZW0_ECTSI	6.950e-46	79.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L4H0_9PHAE	9.500e-42	75.44	Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=8...	[more]