Homology
BLAST of mRNA_C-linearis_contig10.534.1 vs. uniprot
Match:
D7FZW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW0_ECTSI)
HSP 1 Score: 166 bits (419), Expect = 6.950e-46
Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 0
Query: 4 GGSAKKRGRGGWKKDYTVIASVESKAGEAAA--AAAGWFVNGDARYACYEELPADMRPHVGDVLAFKTLSLNEETWTPELSSYRTAEVSAFDTASGMVRLFPVFLEDSDRE 112
GGSAKKRGRGGWKKDY VIASVESKAGEAAA AAAG NGDARY YEELP DMRP V DVLAFKTLSLNEETWTPELS YRTAEV+AFDT+SG+VRL P +ED +++
Sbjct: 131 GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENGDARYVVYEELPTDMRPQVCDVLAFKTLSLNEETWTPELSPYRTAEVTAFDTSSGLVRLLPASIEDDNKD 241
BLAST of mRNA_C-linearis_contig10.534.1 vs. uniprot
Match:
A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE)
HSP 1 Score: 157 bits (398), Expect = 9.500e-42
Identity = 86/114 (75.44%), Postives = 91/114 (79.82%), Query Frame = 0
Query: 4 GGSAKKRGRGGWKKDYTVIASVESKAGEAAA--AAAGWFVNGDARYACYEELPADMRPHVGDVLAFKTLSLNEETWTPELSSYRTAEVSAFDTASGMVRLFPVFLEDSDREANG 115
GGSAKKRGRGGWKKDY VIASVESKAGEAAA AAAG N DARY YEELP DMRP V DVLAFKTLSLNEETWTPELS YR AEV AFD +SG+VRL P ED +++ G
Sbjct: 592 GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASTEDDNKDGGG 705
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.534.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
G D G G G S A K K R G R G G W K K D Y T V I A S V E S K A G E A A A A A A G W F V N G D A R Y A C Y E E L P A D M R P H V G D V L A F K T L S L N E E T W T P E L S S Y R T A E V S A F D T A S G M V R L F P V F L E D S D R E A N G G G G G D G A A A A G P G H Q Q Q D R H Q Q E E G G F T S A A P S A H A G E G 20 40 60 80 100 120 140 Expect = 6.95e-46 / Id = 79.28 Expect = 9.50e-42 / Id = 75.44 Sequence D7FZW0_ECTSI A0A6H5L4H0_9PHAE
Match Name E-value Identity Description
D7FZW0_ECTSI 6.950e-46 79.28 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5L4H0_9PHAE 9.500e-42 75.44 Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=8... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
G D G G G S A K K R G R G G W K K D Y T V I A S V E S K A G E A A A A A A G W F V N G D A R Y A C Y E E L P A D M R P H V G D V L A F K T L S L N E E T W T P E L S S Y R T A E V S A F D T A S G M V R L F P V F L E D S D R E A N G G G G G D G A A A A G P G H Q Q Q D R H Q Q E E G G F T S A A P S A H A G E G 20 40 60 80 100 120 140 Score = Score = Sequence PTHR15197:SF0 PTHR15197
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig10.534.1 ID=prot_C-linearis_contig10.534.1|Name=mRNA_C-linearis_contig10.534.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=154bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR024822 Coilin