Trimin1|347335|estExt_Genemark1.C_Ctg_100171 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347335
Unique NameTrimin1|347335|estExt_Genemark1.C_Ctg_100171
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length168
Homology
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BLAST of jgi.p|Trimin1|347335 vs. uniprot
Match: A0A835ZKW5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKW5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 9.520e-21
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 
Query:    1 MENVKIKRCEGEGCTKQPNYAFQGQKARFCKGHAQEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRRATAAAGVAXXXXXXXXXXXXXXXXXXXXXXXXTDAATAAVAVASLR 167
            MENVKIKRCEGEGCTKQPNYAFQGQKARFCKGHAQEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRRATAAAGVAXXXXXXXXXXXXXXXXXXXXXXXXTDAATAAVAVASLR
Sbjct:    1 MENVKIKRCEGEGCTKQPNYAFQGQKARFCKGHAQEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRRATAAAGVAXXXXXXXXXXXXXXXXXXXXXXXXTDAATAAVAVASLR 167
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347335 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZKW5_9STRA9.520e-21100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 62..127
e-value: 1.1E-7
score: 34.0
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 9..41
e-value: 1.0E-8
score: 35.5
coord: 46..78
e-value: 1.7E-9
score: 38.1
coord: 83..116
e-value: 1.3E-8
score: 35.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_10contigContig_10:1447674..1448461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347335mRNA_4368Tribonema minus UTEX_B_3156 mRNAContig_10 1447665..1448461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347335|estExt_Genemark1.C_Ctg_100171 ID=Trimin1|347335|estExt_Genemark1.C_Ctg_100171|Name=jgi.p|Trimin1|347335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=168bp
MENVKIKRCEGEGCTKQPNYAFQGQKARFCKGHAQEGMENVNQRRCKEEG
CKKQPSFGFQGQKALFCKGHAQEGMEDVNTKRCEGEGCRKLPSFAFQGQR
ARFCKGHAQEGMENVRTKWRRATAAAGVAAAATAAAAAAAAAAASTAAAA
AIVTDAATAAVAVASLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys