Trimin1|353473|estExt_Genemark1.C_Ctg_1650017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353473
Unique NameTrimin1|353473|estExt_Genemark1.C_Ctg_1650017
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length472
Homology
BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A835Z7R8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R8_9STRA)

HSP 1 Score: 847 bits (2189), Expect = 6.410e-309
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0
Query:    1 MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGERRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDGVPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLSFFTKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSFPDPAAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGMANIPIIGNVDDMLFLYHSRQG 471
            MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGERRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDGVPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLSFFTKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSFPDPAAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGMANIPIIGNVDDMLFLYHSRQG
Sbjct:    1 MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGERRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDGVPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLSFFTKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSFPDPAAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGMANIPIIGNVDDMLFLYHSRQG 471          
BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.710e-52
Identity = 118/238 (49.58%), Postives = 141/238 (59.24%), Query Frame = 0
Query:  295 RWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGT----------------------------------IEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGM-----------------------------ANIPIIGNVDDMLFLYHSR 469
            RWA+ELV VNDFI G+F DS I+FIRMP+K   K +EQ GG+R  PR F ++ ART+RAVNI  DLF VP AVFIKL GT                                  ++VV+ KLE+LGE   RP+RVDAHG+VVI GM++AMEM +  +M LVARG MC AMHATD TRVA+E +GDTAQ +                             ANIPIIG+ DDMLFLYHSR
Sbjct: 2124 RWAQELVEVNDFIAGEFGDSTISFIRMPQKIGNKTKEQMGGRRATPRAFANQTARTSRAVNIVKDLFAVPRAVFIKLLGTSFNLPGAPAAINMAAGAACIKAAVSDLDQQSPNRVKVVVGKLEVLGEGVQRPERVDAHGMVVITGMEQAMEMCAAFRMFLVARGGMCRAMHATDTTRVALESSGDTAQKVYEWAQYMGKANGPHKDHMGRGRTGDTMRTANIPIIGDADDMLFLYHSR 2361          
BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A835ZC14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC14_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.360e-44
Identity = 114/257 (44.36%), Postives = 150/257 (58.37%), Query Frame = 0
Query:  251 AAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAP-KPREQS-GGKRP---VPRTFTS-EVARTARAVNITADLFTVPDA---VFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGM-----------------------------ANIPIIGNVDDMLFLYHSR 469
            AA  A + AEARL+ TL D++T + LFH+RF   APPP  LNL R+A+ELV VND++   FED P + IRMP+KG   K  E+S GG R    +    TS  +   + A N+ A    +  A   + ++  G +++V+AKLE+L  +  RP RVDAHGIVV+ G+++  EM    K  L+ARG+MC AMH TDRTRV  E  G+TAQ +                             ANIP+IGNVDDMLFLYHSR
Sbjct: 1091 AAAKALLGAEARLRATLTDKDTISGLFHSRFAAAAPPPQALNLVRFAKELVHVNDYVSDLFEDIPTSAIRMPKKGTGHKTLEESVGGMRQAVFIKLQGTSFHLPGASAATNMAAGAACIKAASCDLDMQFHGRVKLVVAKLELLAADGQRPNRVDAHGIVVVSGIEQVAEMTFAFKQSLLARGSMCAAMHDTDRTRVMPELGGETAQRVYEWAQYMLKADGQHKAHIDRGRTRDAMRVANIPVIGNVDDMLFLYHSR 1347          
BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A7S2V6X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6X9_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.890e-5
Identity = 32/91 (35.16%), Postives = 45/91 (49.45%), Query Frame = 0
Query:  116 PDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAG--------------------QIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITD 186
            P++A   R  +E VTNGV V+ + V CP+++  G                    +  W Y +  RLL  H +   A++ CQLTRRHW ITD
Sbjct:   38 PESAEYGR--TERVTNGVLVQIANVFCPEMSVIGRDSRLTHPNDATQEENLNTSEYFWTYSVRYRLLNDHHSRPPAMKSCQLTRRHWVITD 126          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353473 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z7R8_9STRA6.410e-309100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDW7_9STRA3.710e-5249.58Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A835ZC14_9STRA2.360e-4444.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V6X9_9STRA4.890e-535.16Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036767ApaG domain superfamilyGENE3D2.60.40.1470ApaG domaincoord: 122..197
e-value: 2.9E-8
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_165contigContig_165:208803..217497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353473mRNA_17045Tribonema minus UTEX_B_3156 mRNAContig_165 208803..217646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353473|estExt_Genemark1.C_Ctg_1650017 ID=Trimin1|353473|estExt_Genemark1.C_Ctg_1650017|Name=jgi.p|Trimin1|353473|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=472bp
MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGE
RRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDG
VPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQ
IVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLS
FFTKTSSSSSGGGGGGSASSTSAKRKANSIDAGDGGGSSGGDGSSSFPDP
AAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEEL
VPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVART
ARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGI
VVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGM
ANIPIIGNVDDMLFLYHSRQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036767ApaG_sf