mRNA_17045 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353473
Unique NamemRNA_17045
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A835Z7R8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R8_9STRA)

HSP 1 Score: 847 bits (2187), Expect = 9.020e-308
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 1 
Query:    1 MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGERRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDGVPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLSFFTKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSFPDPAAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGMANIPIIGNVDDMLFLYHSRQG 1413
            MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGERRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDGVPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLSFFTKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSFPDPAAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGMANIPIIGNVDDMLFLYHSRQG
Sbjct:    1 MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGERRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDGVPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLSFFTKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSFPDPAAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGMANIPIIGNVDDMLFLYHSRQG 471
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BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.670e-51
Identity = 118/238 (49.58%), Postives = 141/238 (59.24%), Query Frame = 1 
Query:  883 RWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVARTARAVNITADLFTVPDAVFIKLQGT----------------------------------IEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGM-----------------------------ANIPIIGNVDDMLFLYHSR 1407
            RWA+ELV VNDFI G+F DS I+FIRMP+K   K +EQ GG+R  PR F ++ ART+RAVNI  DLF VP AVFIKL GT                                  ++VV+ KLE+LGE   RP+RVDAHG+VVI GM++AMEM +  +M LVARG MC AMHATD TRVA+E +GDTAQ +                             ANIPIIG+ DDMLFLYHSR
Sbjct: 2124 RWAQELVEVNDFIAGEFGDSTISFIRMPQKIGNKTKEQMGGRRATPRAFANQTARTSRAVNIVKDLFAVPRAVFIKLLGTSFNLPGAPAAINMAAGAACIKAAVSDLDQQSPNRVKVVVGKLEVLGEGVQRPERVDAHGMVVITGMEQAMEMCAAFRMFLVARGGMCRAMHATDTTRVALESSGDTAQKVYEWAQYMGKANGPHKDHMGRGRTGDTMRTANIPIIGDADDMLFLYHSR 2361
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BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A835ZC14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC14_9STRA)

HSP 1 Score: 177 bits (448), Expect = 9.220e-44
Identity = 114/257 (44.36%), Postives = 150/257 (58.37%), Query Frame = 1 
Query:  751 AAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEELVPVNDFIGGKFEDSPIAFIRMPRKGAP-KPREQS-GGKRP---VPRTFTS-EVARTARAVNITADLFTVPDA---VFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGIVVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGM-----------------------------ANIPIIGNVDDMLFLYHSR 1407
            AA  A + AEARL+ TL D++T + LFH+RF   APPP  LNL R+A+ELV VND++   FED P + IRMP+KG   K  E+S GG R    +    TS  +   + A N+ A    +  A   + ++  G +++V+AKLE+L  +  RP RVDAHGIVV+ G+++  EM    K  L+ARG+MC AMH TDRTRV  E  G+TAQ +                             ANIP+IGNVDDMLFLYHSR
Sbjct: 1091 AAAKALLGAEARLRATLTDKDTISGLFHSRFAAAAPPPQALNLVRFAKELVHVNDYVSDLFEDIPTSAIRMPKKGTGHKTLEESVGGMRQAVFIKLQGTSFHLPGASAATNMAAGAACIKAASCDLDMQFHGRVKLVVAKLELLAADGQRPNRVDAHGIVVVSGIEQVAEMTFAFKQSLLARGSMCAAMHDTDRTRVMPELGGETAQRVYEWAQYMLKADGQHKAHIDRGRTRDAMRVANIPVIGNVDDMLFLYHSR 1347
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BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A7S2V6X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6X9_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.500e-5
Identity = 32/91 (35.16%), Postives = 45/91 (49.45%), Query Frame = 1 
Query:  346 PDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAG--------------------QIVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITD 558
            P++A   R  +E VTNGV V+ + V CP+++  G                    +  W Y +  RLL  H +   A++ CQLTRRHW ITD
Sbjct:   38 PESAEYGR--TERVTNGVLVQIANVFCPEMSVIGRDSRLTHPNDATQEENLNTSEYFWTYSVRYRLLNDHHSRPPAMKSCQLTRRHWVITD 126
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BLAST of jgi.p|Trimin1|353473 vs. uniprot
Match: A0A835ZF57_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF57_9STRA)

HSP 1 Score: 689 bits (1779), Expect = 4.070e-241
Identity = 575/575 (100.00%), Postives = 575/575 (100.00%), Query Frame = 1 
Query:    1 MVQLRPGGSPLNENLSWLAAEGGHLELLQWARANGGAWDEQTCSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGVTALEAQGHNGNSEGGMRARSVMDMLAEEEEEHQLREAFGGHTSLGHIHWQEQQGREAEARAAXXXXXXXXXXXXXXXXXSGGQRGIGAXXXXXXXXXKGGGLTGTDRLVRRGGARGPWGLITGAVDVDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWKGWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARPEYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGALVKQAPATSAAAANAAAPPRLPAREHMRVFSEGSTTAQMDHALLRAKDAQIAVPAXXXXXXXXXXXXXXXXXXXXXIAELQAALARATLDRQKSESEALDLRTRIVILESSLKSTKPAWMKKSTSLAA 1725
            MVQLRPGGSPLNENLSWLAAEGGHLELLQWARANGGAWDEQTCSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGVTALEAQGHNGNSEGGMRARSVMDMLAEEEEEHQLREAFGGHTSLGHIHWQEQQGREAEARAAXXXXXXXXXXXXXXXXXSGGQRGIGAXXXXXXXXXKGGGLTGTDRLVRRGGARGPWGLITGAVDVDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWKGWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARPEYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGALVKQAPATSAAAANAAAPPRLPAREHMRVFSEGSTTAQMDHALLRAKDAQIAVPAXXXXXXXXXXXXXXXXXXXXXIAELQAALARATLDRQKSESEALDLRTRIVILESSLKSTKPAWMKKSTSLAA
Sbjct:    1 MVQLRPGGSPLNENLSWLAAEGGHLELLQWARANGGAWDEQTCSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHGVTALEAQGHNGNSEGGMRARSVMDMLAEEEEEHQLREAFGGHTSLGHIHWQEQQGREAEARAAXXXXXXXXXXXXXXXXXSGGQRGIGAXXXXXXXXXKGGGLTGTDRLVRRGGARGPWGLITGAVDVDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWKGWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARPEYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGALVKQAPATSAAAANAAAPPRLPAREHMRVFSEGSTTAQMDHALLRAKDAQIAVPAXXXXXXXXXXXXXXXXXXXXXIAELQAALARATLDRQKSESEALDLRTRIVILESSLKSTKPAWMKKSTSLAA 575
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353473 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z7R8_9STRA9.020e-308100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDW7_9STRA1.670e-5149.58Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A835ZC14_9STRA9.220e-4444.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V6X9_9STRA5.500e-535.16Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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BLAST of jgi.p|Trimin1|353473 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZF57_9STRA4.070e-241100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_165contigContig_165:208803..217646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353473|estExt_Genemark1.C_Ctg_1650017
BRITEko00000,ko04121
KEGG koko:K10290
GOsGO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0019005,GO:0031461,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1990234
Preferred nameSKIP16
DescriptionF-Box protein
COG categoryP
Max annot lvl35493|Streptophyta
EggNOG OGsCOG2967@1|root,KOG4408@2759|Eukaryota,37MMI@33090|Viridiplantae,3GD69@35493|Streptophyta
Evalue2.17e-05
Seed ortholog88036.EFJ10294
Hectar predicted targeting categoryother localisation
TranscriptId353795
TrackFilteredModels1
ProteinId353473
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353473gene_17045Tribonema minus UTEX_B_3156 geneContig_165 208803..217646 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353473Trimin1|353473|estExt_Genemark1.C_Ctg_1650017Tribonema minus UTEX_B_3156 polypeptideContig_165 208803..217497 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17045_1exon_17045_1Tribonema minus UTEX_B_3156 exonContig_165 208803..208864 +
exon_17045_2exon_17045_2Tribonema minus UTEX_B_3156 exonContig_165 209597..209672 +
exon_17045_3exon_17045_3Tribonema minus UTEX_B_3156 exonContig_165 210041..210197 +
exon_17045_4exon_17045_4Tribonema minus UTEX_B_3156 exonContig_165 211465..211537 +
exon_17045_5exon_17045_5Tribonema minus UTEX_B_3156 exonContig_165 212256..212330 +
exon_17045_6exon_17045_6Tribonema minus UTEX_B_3156 exonContig_165 213064..213202 +
exon_17045_7exon_17045_7Tribonema minus UTEX_B_3156 exonContig_165 216476..217014 +
exon_17045_8exon_17045_8Tribonema minus UTEX_B_3156 exonContig_165 217117..217342 +
exon_17045_9exon_17045_9Tribonema minus UTEX_B_3156 exonContig_165 217429..217646 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17045CDS_17045Tribonema minus UTEX_B_3156 CDSContig_165 208803..208864 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17045UTR3_17045Tribonema minus UTEX_B_3156 three_prime_UTRContig_165 217498..217646 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17045 ID=mRNA_17045|Name=jgi.p|Trimin1|353473|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1565bp|location=Sequence derived from alignment at Contig_165:208803..217646+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGGAAATAAGTGTTTTTGAGTATGCCCATGAGCACGAGGGGCTGTT
TGGGGGGTACAGCTTCTACACGTATTACTACTGCACGACGCTGCTTTCAG
TGGAGGAGGCCACATTCATCACTGCCCGCAAACCTCTGGCACTCGGCGAG
CGCCGTTTCCAGTTTGGCGCCAACACGCTGCCCATGATGAACAAGGCGCT
GTTCGCTCACGACAGCGCTGCCGGCGGCGAAATTACCCTAGAGTGCCCCC
AGTTCGAGGAGAGCATGCGGTTTGTGCCGCTGGCGTGCCTGCCAGACGGC
GTCCCTGCACTGGGCATCAGCCTTTTCCCGAGGGCACCACGCAACCCAGA
CAACGCCAATCTGAGTAGGCTGTTCAGTGAAGCGGTCACCAATGGCGTCA
GGGTGCGCTTCTCAGCGGTCATGTGCCCTCAAGTCGCCCCTGCGGGCCAG
ATAGTGTGGGCCTACCGCCTTGGCCTGAGGCTGCTTCGGCGCCATCCCAC
CAACATGCGCGCGCTGGAGTGCTGTCAGCTGACGCGGCGCCACTGGAACA
TCACCGACGACAGCGTGCGTGAGACGCAGCAGCCGAAGAATCTTCTCAGC
TTCTTCACCAAAACTAGCAGCAGCAGCAGCGGTGGCGGTGGTGGCGGCAG
CGCCAGCAGCACCTCAGCCAAGAGGAAGGCCAATTCAATCGATGCTGGTG
ACGGCGGTGGCAGCAGTGGTGGCGATGGCAGCAGCAGCTTCCCGGATCCT
GCTGCTGTTGCTGCCAAAGTTGAAGCTGAGGCACGTCTGCAAACCACGCT
GAGGGACCAGAACACCACCAACGCCCTCTTCCACACCCGCTTTGACCCCT
GTGCTCCACCTCCTGCAACCCTCAACCTCGGGCGATGGGCAGAGGAGCTG
GTGCCGGTGAACGACTTCATCGGTGGCAAATTCGAGGACAGCCCCATCGC
ATTCATCCGCATGCCGAGGAAGGGAGCCCCCAAACCTCGGGAGCAAAGCG
GAGGCAAGCGGCCCGTACCACGCACTTTCACTAGCGAGGTCGCCAGAACT
GCTCGTGCTGTGAACATCACTGCAGATCTATTCACGGTGCCCGACGCAGT
CTTCATCAAGCTCCAGGGCACGATCGAGGTTGTGCTGGCAAAGCTGGAGA
TGCTGGGGGAAGAGTCGGCGAGGCCACAGCGTGTCGATGCCCATGGCATC
GTGGTCATCAAGGGGATGAAGGAGGCTATGGAGATGGCAAGTGACCTCAA
GATGCGGCTGGTGGCCCGTGGCGCGATGTGCCCTGCCATGCACGCCACCG
ACCGCACCAGGGTGGCGGTAGAGGGCACAGGGGACACGGCACAGGGGATG
GCCAACATCCCTATCATTGGCAACGTAGACGACATGCTCTTCCTCTACCA
CTCTCGCCAGGGTTAGGCCGTTTGTTTTACACAGCTTTGATATGCAAGGA
TGATGAGTTTGTCAGCAGCAGCACTGCGACTCCTTTTGGCTCTGCAGATT
TGAAAGATGTGACCGCACACAACACACATTCGAAGTGGGTTTAAACACGA
AGACTTGGCATGCTA
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protein sequence of jgi.p|Trimin1|353473

>Trimin1|353473|estExt_Genemark1.C_Ctg_1650017 ID=Trimin1|353473|estExt_Genemark1.C_Ctg_1650017|Name=jgi.p|Trimin1|353473|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=472bp
MREISVFEYAHEHEGLFGGYSFYTYYYCTTLLSVEEATFITARKPLALGE
RRFQFGANTLPMMNKALFAHDSAAGGEITLECPQFEESMRFVPLACLPDG
VPALGISLFPRAPRNPDNANLSRLFSEAVTNGVRVRFSAVMCPQVAPAGQ
IVWAYRLGLRLLRRHPTNMRALECCQLTRRHWNITDDSVRETQQPKNLLS
FFTKTSSSSSGGGGGGSASSTSAKRKANSIDAGDGGGSSGGDGSSSFPDP
AAVAAKVEAEARLQTTLRDQNTTNALFHTRFDPCAPPPATLNLGRWAEEL
VPVNDFIGGKFEDSPIAFIRMPRKGAPKPREQSGGKRPVPRTFTSEVART
ARAVNITADLFTVPDAVFIKLQGTIEVVLAKLEMLGEESARPQRVDAHGI
VVIKGMKEAMEMASDLKMRLVARGAMCPAMHATDRTRVAVEGTGDTAQGM
ANIPIIGNVDDMLFLYHSRQG*
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mRNA from alignment at Contig_165:208803..217646+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17045 ID=mRNA_17045|Name=jgi.p|Trimin1|353473|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8844bp|location=Sequence derived from alignment at Contig_165:208803..217646+ (Tribonema minus UTEX_B_3156 )
ATGAGGGAAATAAGTGTTTTTGAGTATGCCCATGAGCACGAGGGGCTGTT
TGGGGGGTACAGGTCAGTGCTCAGAGGCGCTAGTGCCGCTCATTTGAAGT
ATTTACCTCAAGTTGGTCCAGCGTGAGGCTGTGTGTGTGATGCCCTAGTC
TAGGGGTCAGTAGGAGTTAAGCAGCGACGACAACAGAGACTGCAAGCGCA
GCTGCATGACAAAGTCGTCTCATCAGTGGAGCAGGCTTACAGGCAGCTTG
GTGTGTCAAAGCTGCTTGAAGCAACACTTCCTGCGCTGCAGCACTGACAA
TACGTCGATCAGCATGCACAGACTGTGCTGTCAATAAGTACAGCATACGA
ATGTATGTTTACACACAAGTGTGTGTAAACATGTATACTGAGAAGTATGT
ACATATCTCCTTGATCAGATGTCTGCAGGCTGCAGTTTCTTTAAAGCTGA
AGGGGTTGCGCATTCCTTATCTGCCTGCCTAGTGTCACATGTTTATTTAA
GAGTGCTTCGAGTCGCGCTCGCGTCCCATTCGTGGCAGGTACTCAAAAAA
CCATACTCCAATGTGCACATCGCGTCAACATCACGTAATCCGGTGCAACG
ACTCGAGTTCTTAGTAGCTCACACATTGTGCCAGCTTTAAGGGTTGAGCA
GTGGTGGAGATATCAAGGACCCGCAGCCACTTGTGCGCGTCTTTTGTCCT
AGGTAACCCTCGTGCAACACGTGCAGATCCTTTTTTTACAGCAGCCGTCT
CATAGCTACCCTCTGCGCTCCCTGCTGTGCTCTCGCCCCCCCAGCTTCTA
CACGTATTACTACTGCACGACGCTGCTTTCAGTGGAGGAGGCCACATTCA
TCACTGCCCGCAAACCTCTGGTCAGTGACGCCGAGTACGCCTCTCTGAGC
ATGCAAGTGACTGAAGTTAGCCCTCAGCACATCAAGTTTAGTACCTGACT
GATGGATGCAGCAAAGCTGTATATACTTCGAAGTATAGAAACATGCTCCT
GGGTGCGTGCCTGGTAAGCACGCCCTGCTGCTGATTTTTTAGCTGCGGCC
TCTGAGGCTCTGAGCCTTGCGTCTCCTCTGGACCGTCCCTTTTATGGCAA
CACGCGAAGCCCATGCTACTGCGAGAGCAGTGCTACAGCACACAAGCCCA
CCACAGTGCCGCGTGCGCTGGTTGCTGATACTCCAACGCATAACGTAGCA
TCACCCGCAACCATTCGTCGCGCGCATTGCTCGTGCAGGCACTCGGCGAG
CGCCGTTTCCAGTTTGGCGCCAACACGCTGCCCATGATGAACAAGGCGCT
GTTCGCTCACGACAGCGCTGCCGGCGGCGAAATTACCCTAGAGTGCCCCC
AGTTCGAGGAGAGCATGCGGTTTGTGCCGCTGGCGTGCCTGCCAGGTGAG
GACTCAGCGCTTTAATGGCTTGAGCGTATTGTTGTGAGCCGGCATAGCTG
TGCAGCTTGGAGTTAATATGTCCTTCTGCATGCTGCCGCGGGAGGCCGCA
GCGCAAGCACGGTTGTATGGACACCTCGCCTCCGACATGCGTTCCAGGTG
CATGTGTTGCTGTGGTTGTCCCTGTAGAGGTGATGGGTACCCGTACCTGC
CACGCAGGCGCAATCGTGCGTCTATCTTGTTTCTGAAAGATTGATATTGA
AGATGCAACCCCCCCCCCCCCCCCCCCCTTCCTCCCCCCACACACACTGC
ATTCGAGATCAGCATTATGCGAACTACAGTGTCCGCTGTGGGGTACACCG
TGGCTGTCTCCTGCCATGTCGCATGCACCTTGATGCCTGCCGCATGTTAG
ATTCATGTGCGGTCAGTACCTGCACCGCCTTTGGGCATATGCAGGCGGTG
TGCCGGCACGCTCAAAGGAGCACAAAAATGCTTACGTGAATCAGATCACA
TTGTTCACCAGCGACATTCATGCTTGGTTTCAAGCTCTGACGCTAGATCC
TACTCCTGTGTGCCATGCTGCAGGCAGTCTGATGGCATGGCTGGAAGAAT
ACTTGGGTCGACTGCAGGCTGGCTGCTACCGCAGGTCCATGCTGTGGGAC
CAGCCAGACTCAGGTTGGTCACCGCTGCTGCGCCTGTTGCAACAACGTTT
TCAGCTGCAGCGCAGCACGTATGCTTGTGCTGCCTGCTGATGGGGAGGGC
TTGTCTGAAAAGGGAAAAAAAATGGAAGCATAAGCATTAGTTTTGGGGGC
CAGATTTGGTGAAGGCTCTGTTGCAGCTGGCCTTGCGTGCAGAGGTGTCA
GTGAGGGGGCGGCCGGGTGGCCGTGCAGGCATCTTTGGGCACTTCAAACC
AGCCAAATGTGCGCGCCGTACCAACCAATGATGCTGTTTGCACATCAGGC
AGCCAGTAAGGGCAGGTATCATTCGTGCACAGCACGTGCGTGTCATCATC
AGCAACTGTACCTGCTTTTGTGAGTAGATGCACCCGCGCTGTAATTGCAT
CAGCAACGCCACCGCATCCAGTGCTGACACGGGGTCATGGAAACGAATCA
AAAGATTGTAGAACTCTAGGTGACAAACGTGTGGTCAGCCATCAAATTGA
ATGCCTTTCACCAATAACCGTGGTCGCCGCTGCTGCGGCAATCATATCAG
GTGCAATCCGCAGACAGGTTGGCCTTGCCATGACCGCGGTGCTGCCTTTG
TCATGCATGCAGACGGCGTCCCTGCACTGGGCATCAGCCTTTTCCCGAGG
GCACCACGCAACCCAGACAACGCCAATCTGAGTAGGTGAGCTTATTAGTC
ACTACAGTCGTCTGGCAGACGCAATGTCTCCTTGCCTGATGCATCAGAGC
AATACTTCAAGGTATATGCTTATCTTTGCTTTACGCGCCCCAGGTGACAG
GCAGTGGTGGAGGTGGCGAAGGGCGCACTGGTTACGTGATGTTGTTCATA
CCAGGCGCACAGAGTGCACAGAGGGGCGTTGCTGTTAGTGCTGCTGCTGC
TGTTGCTGCCGTGTATCACAGTTGCCTGCAGCTGGAGATGGGGCAGCAGT
GCACAACACAATTGTCCACGTCTTGCCAGTGCTGACTGGGGTGTACATGC
AGCCTTTTCCTAGTTGTTGTTGCGGAACTTAAATGAGCTGACGTAATATC
TGGCGGAATCGCTCTTTGCCACAAATCTCATAAATCTGCAGCTGGAGGCT
ATGTAGCATCAGGGGTTTAAAGACAGTGCGGCCTGTGTCACCTGCGGTTG
TACCTCGATTAGCCAAACGGAAGTATGCAGATGAAACAAAGTCCAAAGTC
ACTGTGGCAAAGCTGCCTTTGCTTTCCCTGCCAATTGCACAGCGGCGTTC
AAACTCAAAGTTGACGTGATGGCCTGCTTGACTCTCTGATGCGCATGGCT
GCAACTGCTCTTCTCTGCCACACGCTCCCGTGCAATTGCACTCTTGGTGG
TGCGCTGACATGCGTTTCTCTGCTATCGCCACTACTGCTCGTGTGCATGT
CAGGCTGTTCAGTGAAGCGGTCACCAATGGCGTCAGGGTGCGCTTCTCAG
CGGTCATGTGCCCTCAAGTCGCCCCTGCGTGAGTATGCACTTAGAAGTAT
GTGTGTATCGCATGCACTGCGCTCAAAGTAACTGCCCTGCAAGCACAAAT
GGTGAGTCAGTTGCAGGACATCTTGTTTTAATATTGTACATGCGTACATG
CGTGAGCGCGTTCAAGCAGTGCAAGGACAGGTGAGCGTCACAGTCGAATA
TGTGTGTCACAGTTCAAGTAAGCATATGAGCGTGCGAGCGCGAGCAGCAG
TGCTTCGACACCATGTTGATGCCCTGCATGGATGCAACACATGCAGCTGA
CATGCTGGCCAGCACTGCACTTGAACTGACGCTCCTGCCATGCTCAGGCG
AACATGCTGTGCGGCACATGTGTTCGTGCTTGTCACTTGCTCTGGTGCCC
CCTGACGGCAGATGTAATTACTGTAGTCTTTGCATACTTCAAGTACATGT
GAATCAATAGCACTTCTCGAAATGATGACAGGCACGATCCCAGCACCGCC
AGGGCCTTGTTGACTCTCTGGCAAACGTCTGTGCCACCTCCCTTGGACAT
TCTCACAATTTCACACTTTTTGAAAACCTTTGATTCGCCTACGCTGGCAA
CTGTTGCCTGTGCGCCAGAACCACTGCGCGACATATGGTGATCGAGTAAC
GCCTGCAAAGGAAACGTGCCACTCACTTCATCTCTTCATTTGTTTAGCGG
ATGCCCGTCCAAGTCCCTCCTCACTGTGTGCCCACTGCGTGCTCTCATGC
TGCATTGACAGGGGCCAGATAGTGTGGGCCTACCGCCTTGGCCTGAGGCT
GCTTCGGCGCCATCCCACCAACATGCGCGCGCTGGAGTGCTGTCAGCTGA
CGCGGCGCCACTGGAACATCACCGACGACAGCGTGCGTGAGACGCAGCAG
GTGAACTCAGTCGACTACAAGCGAGTGGACGATGATCTCACATGGAGGGG
TACACTCTTGGCTCTTACTCATGTTGCGGGTTCTGCTGTCAGTCATGACA
TGGTCGTCATTGCAAGTCGATGGACTTAGCAGTCACAAGCTGATACTCAA
AAATTCGAGCCAGTTGGGTGGGTGTGCTGCTGTGCTTGCGCGTCTCGTGA
AGCGCAGCGGCAGAGCTTGGCGCTGCAGGTACATGAGTGTTGTGTGGAGC
ATGTGCTCGGCGTGCAAGCCACTTTGAAGTACTGCAAGTATATACATTGA
CGAATGTGCATCCCCCTCAAGCACCCAACAGCTCACCACCATGCCATCTC
AGTGAATCAGATATCAACCTTGGCTTTGCGCGAATGCATGCGTGCCGTCC
TTGCTGGATATTATTCCTTGATCTTGAGCTGACGCGCATGTGAAATTACT
GTCAGCTCGAACTGTGTCAGCGCAGGTAAGACAGCCATAGCGTCAACATA
TACACTGTGTTGCTGCGACTGATGATATCCGTCATAATTTGGGGAAACCG
TGTCGAAGTATTTGAAGTATCATGATTGTTGACCTGCCGGTTTTCCGCAT
TTCGCTGCTTTCTTGCATTGCAAATTGTATCTGCTGAAATCACATTATGG
TAACGTGGTTTGGTGTGCGGTGTTGTCATGCACATTCGCTTTGTCGTGCT
GTCCAATGTGAGGCCGTGTGAACATTATCATGAACTCCGCATCTGCTCTG
CCAGCAGCAGATGTGCTTGAACACATTGTAGTGCACGTGACGCTGCACAT
GGCGGAGTTCGCAGGGGCTGACAACGGGACGAGGATGGAGTGGGGAAAGG
GATGCCATTTGGCGATGTCGTATAGGAGTGATCGTCAATGTGCATTCAGA
CACTTTTTCACAAGATACATGTTAACTGTAGTAGCATGTTTGATGTCAAC
CATGTGGGCTTTTTTGTTCCTTGAGCGAGAACTAATGAAAATGACATATG
CTTTAAACGTATACTTCGAAGAAGTAGTCTACTTGTGGAGACAAATTGCT
GTTTAAATGGTCACCTCTCTTACATCACATGGCATTCGCAATCATCGTGT
GCCCTAACTGCCTCTGCTGCACGACTGCTGTTCTTGATGCTGCTTGTAGG
TTGATGGAGAGGCCGTAGTTGGCCTCTATCCCATTCTTTCGGGTCTGCCG
AGCACCGACCAGGTGACGCGTTGGTGTGCTTGCTGATGTGATTGACACTT
GAACGTCAGACACTGTGAGGCTTTGCGCCATCGTCAGACACTGCGAGGCT
GTTGCTCAAGCTCAAGCAAGAAAAATTGTTTTTTTCCAAAATGGTCAAGA
TCTCACGCTACGCATACCACAGCATATGCCCTTGTCAGCACAGCCACCCC
TTTGAAAATCATGTGATGGATTGGTTATTGAACAACCGAGTACTTTCCTC
CTTTTTTGACTTGATGATTTGGGCTGTAGGTTGCTCAAAGTTTACAGAGA
CTCGACGGGAACTACCAAAATTATAATTTTAGGTAAAGAGAGAGTCCAAC
CTTCAATCATTATGAGAAGTGAAAACTTCAAGAAGGTGAAAATCCGTTGA
CTGAAAATAGTCGTGGGGGTTCAAGTCCCCCCGCCCCCAATTAAGGTAAA
CTTCTCAATTCCATATGGCTGCTTATTAATATAATTTTAATTTTATTAAC
AGAGAGAGAGATGAAAGTGGGTGACATTATTCAACCTACTTGCAGCACTT
TTTTAAATGGCAAAATTGAAAATTTGAGGGAACTGGTGCCTTGACATGTT
GGTGACGTTGTGTCAAACGAGCAAAATGCCTGCATTGCACATGTGGCATC
AGTGCCACCAGTGGATGCTGCGCCACCAGGGTGTGTGGGTGGATGCCAGC
AACACATCTGCAGCAAAAAAATATTGGCTACTCTTGCAGCACAGGCATGT
TCAGTATTGTAACTTCATCAAGAAAAGCATCCTGCTCCCTTGTAAGGCCA
CCAGTACTGTGCCCAACACATGCACCGCCAAGAGGTGAAAGTCAACAACT
CAAAGCGGCAAGTAAGTCGAAGCTGTGCACAGAAAGAGTCGAGGCTGTGA
AATCATCGAACATTGGCGTCGCTGTTGTTGGAGGGCACGGTTTGGTCAGC
GAAAGATCCTGGCGTCAAACGCTAATGTTGTCAAGCCTTCCAATCTTGGG
CCGATGCAGCTATGCTTGTGTGGTGCCACCGGTGAGCACTGCTTTTGATA
GTACGGCAATGGACACGAAGTTATGCACGCAATACGCTTCCCGGCTCATG
AGCAGCGTGGTTGCAATATTTGAGTGCCCCAGACCGCGGCCGTTCGAGCT
GGTTTGTGCTTTAGCCTTGATGTCTGGCAGGACTCTTGCTGAAGTGCTTG
TTACAGGCGTATTCACGTTTGCAGAGCTACATAGTGGTTCTGCCACCCAC
CACTGTATGTTTAAAGATGCTAGCACCGCCAACGGCACCGGCAGCGTCAT
ATCTCTCCTGTGTGAGACCAAGGCGTACCTGACTGCGCTTGCAAAGCTAA
GAGCGACAAAGCAAGCGACAGCTGCAGCTTCTCTTTCCACTAGAGCCATC
CACAGCAGCCACTGCAAGAGTGCCAACGCCTCTGCAAAGGCGCTGCTTGG
CGGCGAGCACTTTGTCTTTGGTGATCTCAGAGTGGCATATGCTGCATTTA
CATTTACTGTTTACCGCAATGCTGGTGGCCACCAGTGGCAGCAGCAGGAA
CTGGTTGCATGGCTGCAGCACTCCTTGCCCGGTACCCGCATTGCAACCTC
CGCAGGTTTCGTAGCCGAAGTACGACAGCTGGTGCGTTCATCCTGAGGAA
ATAAAAATGTCGACTATTACTTGTCGGCTATTACATGTACATGACAAAAC
ACAAAACAGCTTGGCCGGAGCAGCAATAGCAGCAGCGCCCATATGCTCCC
GCCACACATGTTCTCAAGCTGCTGCAACCAATGTTCTCACGTTGCGCTGC
AGCAGCAGCAGCAGCCGCACACAACACAACCACTGCCCACAACAACAACA
CTCAGCAAAAAAGGCCGACCCTCGGTTCAAGTGAGTTCGAAGCTCGTTCG
AAGTCCTCAAAGGTCAAAGGATTTAAAGTTCGAGCGTCCTGGAAACTCAG
AAGCAGAGTACCAGTAGCAGCACTAGTGGAGCAGACATGATGGCGTCGCC
ACTGTCGCCGAGCACACGCACCAATAGCAGGGATGGCCGTGTCCCTTCTC
CAGACCCCACTCCTGCTGCCAAGCCGAAGAATCTTCTCAGCTTCTTCACC
AAAACTAGCAGCAGCAGCAGCGGTGGCGGTGGTGGCGGCAGCGCCAGCAG
CACCTCAGCCAAGAGGAAGGCCAATTCAATCGATGCTGGTGACGGCGGTG
GCAGCAGTGGTGGCGATGGCAGCAGCAGCTTCCCGGATCCTGCTGCTGTT
GCTGCCAAAGTTGAAGCTGAGGCACGTCTGCAAACCACGCTGAGGGACCA
GAACACCACCAACGCCCTCTTCCACACCCGCTTTGACCCCTGTGCTCCAC
CTCCTGCAACCCTCAACCTCGGGCGATGGGCAGAGGAGCTGGTGCCGGTG
AACGACTTCATCGGTGGCAAATTCGAGGACAGCCCCATCGCATTCATCCG
CATGCCGAGGAAGGGAGCCCCCAAACCTCGGGAGCAAAGCGGAGGCAAGC
GGCCCGTACCACGCACTTTCACTAGCGAGGTCGCCAGAACTGCTCGTGCT
GTGAACATCACTGCAGATCTATTCACGGTGCCCGACGCAGTCTTCATCAA
GCTCCAGGGCACGTCTTTCAACCTGCCCAGCACACCAGCGGCCACCAACA
TGGCTGCTGGGGCAGCATGCATCTAAGCTGCCATAAGTGACCTAGACCAG
CTTTACCCCAACAGGATCGAGGTTGTGCTGGCAAAGCTGGAGATGCTGGG
GGAAGAGTCGGCGAGGCCACAGCGTGTCGATGCCCATGGCATCGTGGTCA
TCAAGGGGATGAAGGAGGCTATGGAGATGGCAAGTGACCTCAAGATGCGG
CTGGTGGCCCGTGGCGCGATGTGCCCTGCCATGCACGCCACCGACCGCAC
CAGGGTGGCGGTAGAGGGCACAGGGGACACGGCACAGGGGGTATATGAAT
GGATCCAGTACATCATCAAGGCCAACGGTACCACCAGCAGCACATCGATA
GGCAGCGCACCAAGGCCACTCTGCAGATGGCCAACATCCCTATCATTGGC
AACGTAGACGACATGCTCTTCCTCTACCACTCTCGCCAGGGTTAGGCCGT
TTGTTTTACACAGCTTTGATATGCAAGGATGATGAGTTTGTCAGCAGCAG
CACTGCGACTCCTTTTGGCTCTGCAGATTTGAAAGATGTGACCGCACACA
ACACACATTCGAAGTGGGTTTAAACACGAAGACTTGGCATGCTA
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Coding sequence (CDS) from alignment at Contig_165:208803..217646+

>mRNA_17045 ID=mRNA_17045|Name=jgi.p|Trimin1|353473|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1416bp|location=Sequence derived from alignment at Contig_165:208803..217646+ (Tribonema minus UTEX_B_3156 )
ATGAGGGAAATAAGTGTTTTTGAGTATGCCCATGAGCACGAGGGGCTGTT
TGGGGGGTACAGCTTCTACACGTATTACTACTGCACGACGCTGCTTTCAG
TGGAGGAGGCCACATTCATCACTGCCCGCAAACCTCTGGCACTCGGCGAG
CGCCGTTTCCAGTTTGGCGCCAACACGCTGCCCATGATGAACAAGGCGCT
GTTCGCTCACGACAGCGCTGCCGGCGGCGAAATTACCCTAGAGTGCCCCC
AGTTCGAGGAGAGCATGCGGTTTGTGCCGCTGGCGTGCCTGCCAGACGGC
GTCCCTGCACTGGGCATCAGCCTTTTCCCGAGGGCACCACGCAACCCAGA
CAACGCCAATCTGAGTAGGCTGTTCAGTGAAGCGGTCACCAATGGCGTCA
GGGTGCGCTTCTCAGCGGTCATGTGCCCTCAAGTCGCCCCTGCGGGCCAG
ATAGTGTGGGCCTACCGCCTTGGCCTGAGGCTGCTTCGGCGCCATCCCAC
CAACATGCGCGCGCTGGAGTGCTGTCAGCTGACGCGGCGCCACTGGAACA
TCACCGACGACAGCGTGCGTGAGACGCAGCAGCCGAAGAATCTTCTCAGC
TTCTTCACCAAAACTAGCAGCAGCAGCAGCGGTGGCGGTGGTGGCGGCAG
CGCCAGCAGCACCTCAGCCAAGAGGAAGGCCAATTCAATCGATGCTGGTG
ACGGCGGTGGCAGCAGTGGTGGCGATGGCAGCAGCAGCTTCCCGGATCCT
GCTGCTGTTGCTGCCAAAGTTGAAGCTGAGGCACGTCTGCAAACCACGCT
GAGGGACCAGAACACCACCAACGCCCTCTTCCACACCCGCTTTGACCCCT
GTGCTCCACCTCCTGCAACCCTCAACCTCGGGCGATGGGCAGAGGAGCTG
GTGCCGGTGAACGACTTCATCGGTGGCAAATTCGAGGACAGCCCCATCGC
ATTCATCCGCATGCCGAGGAAGGGAGCCCCCAAACCTCGGGAGCAAAGCG
GAGGCAAGCGGCCCGTACCACGCACTTTCACTAGCGAGGTCGCCAGAACT
GCTCGTGCTGTGAACATCACTGCAGATCTATTCACGGTGCCCGACGCAGT
CTTCATCAAGCTCCAGGGCACGATCGAGGTTGTGCTGGCAAAGCTGGAGA
TGCTGGGGGAAGAGTCGGCGAGGCCACAGCGTGTCGATGCCCATGGCATC
GTGGTCATCAAGGGGATGAAGGAGGCTATGGAGATGGCAAGTGACCTCAA
GATGCGGCTGGTGGCCCGTGGCGCGATGTGCCCTGCCATGCACGCCACCG
ACCGCACCAGGGTGGCGGTAGAGGGCACAGGGGACACGGCACAGGGGATG
GCCAACATCCCTATCATTGGCAACGTAGACGACATGCTCTTCCTCTACCA
CTCTCGCCAGGGTTAG
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