Trimin1|132353|gw1.165.7.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|132353
Unique Name	Trimin1\|132353\|gw1.165.7.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	50

Homology

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BLAST of jgi.p|Trimin1|132353 vs. uniprot
Match: A0A835ZFX1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.830e-17
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query:    1 NVCRFAAEGGQLEGLQWLRRTGSTWNSFTCSXXXXXXXXXXXXXXXANGC 50
            NVCRFAAEGGQLEGLQWLRRTGSTWNSFTCSXXXXXXXXXXXXXXXANGC
Sbjct:    1 NVCRFAAEGGQLEGLQWLRRTGSTWNSFTCSXXXXXXXXXXXXXXXANGC 50

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BLAST of jgi.p|Trimin1|132353 vs. uniprot
Match: A0A836C8C2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C2_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.660e-8
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0

Query:    2 VCRFAAEGGQLEGLQWLRRTGSTWNSFTC 30
            VC FAAEGGQLE LQWLRRTGS W+ +TC
Sbjct:    3 VCSFAAEGGQLEALQWLRRTGSAWDEYTC 31

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|132353 vs. uniprot

BLAST of jgi.p|Trimin1|132353 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZFX1_9STRA	2.830e-17	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836C8C2_9STRA	2.660e-8	79.31	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	140860	Pseudo ankyrin repeat-like	coord: 3..48

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_165	contig	Contig_165:32923..33072 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|132353	mRNA_17032	Tribonema minus UTEX_B_3156	mRNA	Contig_165 32923..33072 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|132353|gw1.165.7.1 ID=Trimin1|132353|gw1.165.7.1|Name=jgi.p|Trimin1|132353|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=50bp
NVCRFAAEGGQLEGLQWLRRTGSTWNSFTCSAAAEQGHLEVLQWARANGC