mRNA_16490 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|178082
Unique Name	mRNA_16490
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A835Z6R8_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R8_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 1.870e-168
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1

Query:    1 MLSSQSLCSSSELEFTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDEVGHLQLVAPLLCPSAACCTLPRLLSRCL 675
            MLSSQSLCSSSELEFTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDEVGHLQLVAPLLCPSAACCTLPRLLSRCL
Sbjct:    1 MLSSQSLCSSSELEFTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDEVGHLQLVAPLLCPSAACCTLPRLLSRCL 225

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A835ZFZ2_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFZ2_9STRA)

HSP 1 Score: 304 bits (779), Expect = 6.780e-100
Identity = 140/183 (76.50%), Postives = 157/183 (85.79%), Query Frame = 1

Query:   37 LEFTVIAGLCKLRGTKYVD---PSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTG 576
            +EF +I G CK RG KY D   P F VLA+P  CLFIN + PN + P+P +WLRPTDLSS+PQ+FV+GV AGDIQQGA+GTCYLLGALA LSAH  HLESIFVAHDFEAGVVAVRFF+HN WKY+II+D+IG NEDG+I YSHCKDKNE WLPLIEKAWAKLHGCYEYTH+GHTHHALMDMTG
Sbjct:    1 MEFDIIVGHCKRRGEKYEDLSDPDFPVLADPESCLFINVEKPNADFPVPDQWLRPTDLSSNPQMFVEGVHAGDIQQGAIGTCYLLGALAGLSAHKRHLESIFVAHDFEAGVVAVRFFDHNCWKYIIINDLIGGNEDGNILYSHCKDKNEVWLPLIEKAWAKLHGCYEYTHFGHTHHALMDMTG 183

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A835ZBB9_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB9_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.900e-97
Identity = 141/195 (72.31%), Postives = 156/195 (80.00%), Query Frame = 1

Query:   34 ELEFTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDEVGHLQLVAP 618
            ++EF +I G CK RG KY DP F VLA+P  CL+IN  NPN EI  P +WLRPTDLSSDPQ+FV+GV AGDIQQG +GTCYLLGALA LSAH GHLESIFVAHDFEAGVV VRFF+HN WKY+IIDD+IGCNEDG I YSHCK +NEFWLPLIEKAWAKLHGCYE T  G  HHALMD+TGG    V   +L  P
Sbjct:   47 QMEFDIIVGHCKRRGEKYEDPDFPVLADPERCLYIN--NPNAEIHAPAQWLRPTDLSSDPQMFVEGVHAGDIQQGVLGTCYLLGALAGLSAHKGHLESIFVAHDFEAGVVGVRFFDHNCWKYIIIDDLIGCNEDGRILYSHCKAENEFWLPLIEKAWAKLHGCYEQTSGGWEHHALMDLTGGAGQYVEMSELGRP 239

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A835Z4G6_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G6_9STRA)

HSP 1 Score: 280 bits (717), Expect = 2.260e-93
Identity = 129/170 (75.88%), Postives = 145/170 (85.29%), Query Frame = 1

Query:   70 LRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGG 579
            +RG KY DPSF VL++P  CL+INA+ PN  I +P +WLRPTDL S PQLF++GV AGDIQQG +GTCYLLGALASLSAH GHLESIFVAHDFEAGVVAVRFF+HNSWK+VIIDD+IGCN DG+I YSHCKD N+FWLPLIEKAW KL GCYE    GH HHALMD+TGG
Sbjct:    1 MRGEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A836CIW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW9_9STRA)

HSP 1 Score: 215 bits (548), Expect = 4.580e-64
Identity = 104/203 (51.23%), Postives = 136/203 (67.00%), Query Frame = 1

Query:   22 CSSSELE-FTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDEVGHLQLVAPLLC 627
            C +S L+ F  I G C+  G+K+ D  F V   P  CL+     P+ E P P  W R +++S  PQ+FVDGV AGDIQQG +G+CY LGALA+++AH  HLES+ +AHD + G+VAVRFF +N W+ VIIDD IG   DGSI Y+ CKD++EFW+PL+EKA+AKLHG +E    G T+ A+MDMTGG        QL +P  C
Sbjct:   69 CIASCLQKFNKIVGTCQKAGSKFTDVDFPVTTKPAKCLYTRRHKPSDEFPAPSMWKRSSEISERPQMFVDGVHAGDIQQGGLGSCYFLGALAAIAAHKEHLESLIIAHDLQVGIVAVRFFKNNKWQAVIIDDYIGLKSDGSILYASCKDQDEFWVPLLEKAYAKLHGSFESIDGGWTYQAIMDMTGGAGFLTPCEQLGSPESC 271

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A835YKV9_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKV9_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.420e-60
Identity = 100/187 (53.48%), Postives = 129/187 (68.98%), Query Frame = 1

Query:   22 CSSSELE-FTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGG 579
            C S  L+ F  +    +  GTK+ D  F V   P  CL+      N EIP P  W R +++S+ PQ+FVDGV AGDIQQGA+G+CY LGALA+++AH  HLES+ +AHDFEAG+VAVRFF +N W  VIIDD IG   DGSI Y+ C D +EFW+PL+EKA+AKLHG +E  + G+ +  +MDMTGG
Sbjct:   62 CISKCLQRFNKLIAKSRSTGTKFTDAQFPVTTTPNKCLYTCRLMKNEEIPAPSMWKRASEISARPQMFVDGVAAGDIQQGALGSCYFLGALAAIAAHKAHLESLIIAHDFEAGIVAVRFFKNNLWHAVIIDDYIGLASDGSILYARCTDPDEFWVPLLEKAYAKLHGSFESINGGYNYQVIMDMTGG 248

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A835Z8S4_9STRA (Calpain catalytic domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S4_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.280e-57
Identity = 89/180 (49.44%), Postives = 122/180 (67.78%), Query Frame = 1

Query:   40 EFTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGG 579
            +F  I   C+  GTK+ D  F V   P  CL+     P+ + P P  W R +++S  PQ+FVDGV AGDI+QG +G+CY LGALA+++AH  HLES+ +AHDFE G+VA+RFF +N W+ +IIDD IG   D +I ++ C D +EFW+PL+EKA+AKLHG +E    G  +  +MDMTGG
Sbjct:   72 KFNKIVAKCRSAGTKFTDADFPVTTKPTKCLYKFRHRPSEKFPAPSMWKRVSEISERPQMFVDGVHAGDIKQGYLGSCYFLGALAAIAAHKEHLESLIIAHDFEVGIVALRFFKNNKWQSLIIDDYIGLKSDNTIHFASCNDPDEFWVPLLEKAYAKLHGSFESIECGFGYQVIMDMTGG 251

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A7S1RKC7_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RKC7_ALECA)

HSP 1 Score: 138 bits (347), Expect = 3.400e-34
Identity = 63/180 (35.00%), Postives = 109/180 (60.56%), Query Frame = 1

Query:   64 CKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPI--PPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGH-LESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDEV 594
            C+  GT++ DP++ +   P   L+++ + P  +  +  P  + R ++L  +PQLF  G+ AGDI QG +GTC+LLGA+ ++++H+ H ++ +F+ +D + GV  VRF     W Y ++DD +  +  G + Y+  KD +E W PL+EKA+ KLH CYE    G +  A+ +  GG + ++
Sbjct:   66 CQAAGTQFTDPAWDMTTAPEAVLYVDKEKPGWDCTVGEPAGYKRLSELIQEPQLFKGGIRAGDIIQGRIGTCFLLGAMGAVASHSPHAVKKMFIKYDMKVGVYGVRFCLDGEWTYTVVDDWMPVDGSGRLLYARSKDPDEVWCPLLEKAYCKLHTCYEMCDGGWSTEAIFNFFGGVSGKI 245

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A7S0ANK7_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ANK7_9DINO)

HSP 1 Score: 139 bits (349), Expect = 4.260e-34
Identity = 72/190 (37.89%), Postives = 107/190 (56.32%), Query Frame = 1

Query:   19 LCSSSELEFTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPI--PPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASL-SAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGG 579
            LC++   E   I   CK  GTK+ DP + +   P+  L+++ + P  +  +  P  + R T++ +DP LF  G+  GDI QG +GTC+LLGAL ++ S +   +   F+ +D E GV  VRF     W YVI+DD +  N  G++ Y+H KD  E W P++EKA+ KLH CYE    G    A+ +  GG
Sbjct:  288 LCTA---EVNRIVEKCKADGTKFTDPEWDMTTAPKPVLWVDKEKPGYDNTVAEPAGYKRLTEIVTDPVLFKGGIKPGDIIQGQIGTCFLLGALGAIVSNNRESIRKFFIKYDVETGVYGVRFCLDGEWTYVIVDDWMPVNSSGNLLYAHSKDPQEVWCPILEKAYCKLHTCYEMCDGGFAAEAVFNFYGG 474

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BLAST of jgi.p|Trimin1|178082 vs. uniprot
Match: A0A7S2QNW0_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QNW0_9DINO)

HSP 1 Score: 134 bits (338), Expect = 9.040e-33
Identity = 63/179 (35.20%), Postives = 110/179 (61.45%), Query Frame = 1

Query:   64 CKLRGTKYVDPSFSVLANPRGCLFINADNPNPEIPI--PPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGH-LESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDE 591
            C+  G ++VDP + V  NP   L+++   P  +  +  P  + R +++ ++P+LF  GV AGDI+QG +GTC+LLGAL +++A+    ++  F+ +D +AGV  VRF     W++VI+DD++  ++ G + Y+   D  E W+P++EKA+ KL+ CYE    G  + A+  + GG + +
Sbjct:  138 CRASGERFVDPGWDVTKNPYEVLYVDKQGPGHDCTVGAPAAYKRLSEVVANPRLFKGGVHAGDIKQGQIGTCFLLGALGAIAANKEEAIKKAFIKYDMQAGVYGVRFCVDGEWEHVIVDDLMPVDQYGRLMYARSADPEELWVPILEKAYCKLNTCYEMCDGGRPNQAIYHICGGASGK 316

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|178082 vs. uniprot

BLAST of jgi.p|Trimin1|178082 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z6R8_9STRA	1.870e-168	100.00	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835ZFZ2_9STRA	6.780e-100	76.50	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835ZBB9_9STRA	2.900e-97	72.31	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835Z4G6_9STRA	2.260e-93	75.88	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A836CIW9_9STRA	4.580e-64	51.23	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YKV9_9STRA	2.420e-60	53.48	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835Z8S4_9STRA	3.280e-57	49.44	Calpain catalytic domain-containing protein n=2 Ta...	[more]
A0A7S1RKC7_ALECA	3.400e-34	35.00	Hypothetical protein n=1 Tax=Alexandrium catenella...	[more]
A0A7S0ANK7_9DINO	4.260e-34	37.89	Hypothetical protein n=1 Tax=Pyrodinium bahamense ...	[more]
A0A7S2QNW0_9DINO	9.040e-33	35.20	Hypothetical protein n=1 Tax=Brandtodinium nutricu...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_164	contig	Contig_164:116579..119286 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|178082\|e_gw1.164.25.1
BRITE	ko00000,ko01000,ko01002
KEGG ko	ko:K08585
Description	calcium-dependent cysteine-type endopeptidase activity
COG category	O
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG0045@1\|root,KOG0045@2759\|Eukaryota
Evalue	2.72e-31
Seed ortholog	529818.AMSG_10642T0
Hectar predicted targeting category	other localisation
TranscriptId	178404
Track	FilteredModels1
ProteinId	178082

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178082	gene_16490	Tribonema minus UTEX_B_3156	gene	Contig_164 116579..119286 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16490_1	exon_16490_1	Tribonema minus UTEX_B_3156	exon	Contig_164 116579..116843 +
exon_16490_2	exon_16490_2	Tribonema minus UTEX_B_3156	exon	Contig_164 117871..118079 +
exon_16490_3	exon_16490_3	Tribonema minus UTEX_B_3156	exon	Contig_164 119083..119286 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16490	CDS_16490	Tribonema minus UTEX_B_3156	CDS	Contig_164 116579..116843 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178082	Trimin1\|178082\|e_gw1.164.25.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_164 116579..119286 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_164:116579..119286+
coding sequence from alignment at Contig_164:116579..119286+

spliced messenger RNA

>mRNA_16490 ID=mRNA_16490|Name=jgi.p|Trimin1|178082|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=678bp|location=Sequence derived from alignment at Contig_164:116579..119286+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCTCATCACAATCTCTGTGCTCGAGCAGCGAACTGGAGTTTACCGT
CATTGCCGGTCTGTGCAAGCTTCGCGGTACGAAGTACGTGGACCCCTCCT
TCTCTGTCCTGGCCAACCCCCGCGGCTGCCTCTTCATCAACGCTGATAAC
CCCAACCCGGAGATTCCTATACCGCCAAAGTGGCTGCGGCCTACTGACCT
GAGCTCAGACCCACAGCTTTTTGTTGACGGCGTGCTTGCAGGAGATATTC
AGCAAGGTGCTGTCGGCACATGCTACCTGCTGGGGGCCCTGGCAAGTCTG
TCAGCGCACACGGGGCACCTGGAGAGCATATTTGTGGCACACGACTTTGA
GGCTGGGGTGGTTGCCGTGCGCTTCTTCAACCACAACAGCTGGAAGTACG
TAATCATCGATGACATCATCGGCTGCAATGAGGATGGCAGCATTGCGTAC
TCGCACTGCAAGGACAAGAATGAGTTCTGGTTGCCATTGATTGAGAAGGC
ATGGGCCAAGCTGCACGGCTGCTACGAGTACACTCACTATGGCCACACGC
ACCACGCGCTCATGGACATGACAGGTGGGTGCAATGATGAGGTTGGCCAT
CTTCAACTGGTAGCGCCGCTACTATGCCCCTCTGCTGCCTGCTGCACATT
GCCACGCCTTCTGAGTCGTTGCTTGTGA

protein sequence of jgi.p|Trimin1|178082

>Trimin1|178082|e_gw1.164.25.1 ID=Trimin1|178082|e_gw1.164.25.1|Name=jgi.p|Trimin1|178082|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=226bp
MLSSQSLCSSSELEFTVIAGLCKLRGTKYVDPSFSVLANPRGCLFINADN
PNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASL
SAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAY
SHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGGCNDEVGH
LQLVAPLLCPSAACCTLPRLLSRCL*

mRNA from alignment at Contig_164:116579..119286+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16490 ID=mRNA_16490|Name=jgi.p|Trimin1|178082|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2708bp|location=Sequence derived from alignment at Contig_164:116579..119286+ (Tribonema minus UTEX_B_3156 )
ATGCTCTCATCACAATCTCTGTGCTCGAGCAGCGAACTGGAGTTTACCGT
CATTGCCGGTCTGTGCAAGCTTCGCGGTACGAAGTACGTGGACCCCTCCT
TCTCTGTCCTGGCCAACCCCCGCGGCTGCCTCTTCATCAACGCTGATAAC
CCCAACCCGGAGATTCCTATACCGCCAAAGTGGCTGCGGCCTACTGACCT
GAGCTCAGACCCACAGCTTTTTGTTGACGGCGTGCTTGCAGGAGATATTC
AGCAAGGTGCTGTCGGTGAGTGCCTTGATGACCAACCCCATCGCAAGGTC
TTAGTAAGTCACGTTGTTGACCCATCAAAACACGCACTGACTATAGGCTT
CCTCGCTTCAGCAGGCAAACTTTGCGGCACGCAGGGAGTTTTTCATATAC
GCATTGCAAGTTTTTGTGCTCTGCCATCACGCTCCTTCCAGCTGAGCAAG
GGCACCAGCTCCATTTGACTCACCAAGTCAGCACCTGGTGCAGAGGCTCG
TTTTTTCGCAACTTCAAGTATAACATGTGTACCAGCAAGCCTTCAGGCAG
TTGCAGTGACGGCGCTACGCACTACTGTGCAAACACACGCTGCAGTTGAG
CAATACTACGTTAAAGCACCGCTTGTGTGTATGGTGCGCCATTCACTGCA
TTTTACTACTAAATGGATGATGGACTTCAGGTGTACCTTCATGCTGCCAC
TACACGGTACGTATGTACATAAGTGAATGTGATGCTTTGAAAGCTGAGAG
TAGACCTGTCCGGAGGCCTGGCCCAGTGCTTTCATGTGCGTTGGCAACAT
CAAGGGTTCTACGATCTCGAGCCCCAATTAATTAGCTGATCATCAGCGTA
ATACTACGTGTTGATTGGCCACCCACAAGCATATCTGTAGGCTGAAATGT
GCTGCATGCAGTCTCTCCCAGCTGCGCCAGCCTGAGCAGCCTTCGCATTT
AAACCCATAGAATCAATGCAGATGATCACTGTCCATGCATGCACAAAGAG
CTAGTAGTACTCATCAGCTGGCACACATGTGCAATCCAAGCCACAGCGGC
CGGGCAGCTGGCAGTGCCTCACCACTGAATGCTTCGGTGTCGTATGTGTC
ACAAGCTGCTATGTTCATGTTAATTGCGGGATGCCTCAGTCACTGTGCAA
CGCACGGCCTGAGGGCGTATTCTACAATTGCATCAGTAGCACGTCATGTG
ACGCAATATTTGCCACGGCATTTGTGAATTTTCGAATTTGAAACATTCAG
TGTAACACCATGCTGCATCCAACTTGCTGGTGAATTGTGCAGGCACATGC
TACCTGCTGGGGGCCCTGGCAAGTCTGTCAGCGCACACGGGGCACCTGGA
GAGCATATTTGTGGCACACGACTTTGAGGCTGGGGTGGTTGCCGTGCGCT
TCTTCAACCACAACAGCTGGAAGTACGTAATCATCGATGACATCATCGGC
TGCAATGAGGATGGCAGCATTGCGTACTCGCACTGCAAGGACAAGAATGA
GGTGCGTTGTCTTAGCACGATGTAGTATCTTTGACCACGCAAAGTCACTG
GTCACCAGTTTTGCTCAATGCGCAATACTGAACTTCTTACTTTCAAGCAT
GATATCAGTTTGTAAACACATGTAGTACTTCGAAGTACATGGTGCGGCTA
AGTACTTGTAGGAACAATGTCCCATCATGTTGTGGAAAAGATTGAAAAGC
ATTTCAAGGACGAGTTTGAAATCTCGCTGATACCAAGTGCGAGTTTGTAG
TGGACATGCGCGCCAGTTGCTTGCAATGCAAAGCCTTGCCTGCACAACAC
AATGTGCTGCACTGCGGTATTGCAACGTGTGCACTGTGATACTTCAAGTT
GTGCGTGCTGGCACGCTCCCGCACGTACCGGCGCATGTAGTCATGGAGTC
ACAATATCAGGGCCTCAGGAGAGGCCGTCGGGCACCATGTACCTTAAAAT
TCACAATCCTATATGTACCGGTACAGTATGAAACCCCTTGTGGTTGTAGG
TGCATGGGACACAGCCGAAAGTTCAGTGCACTTCCAAAGCACCTCCTTAC
ATGTCATCTTTATGGCAACTTGGGCTGTTTGAGTACAGTAGTATTGTGAA
CGGGTATGCTCAAAATGAATTCTCTACCACGCTGTCAGCGGCGCTGATGA
CATCACTCACTTTGTGCACGGAGCATTCTTCGTTCATGTCATGCATGCTC
ATTCTTCGTTCATGTCGTGCATGCTCACATGTACTGTACTTATGTACAGG
TTAACGAGCATCTTACTGAAGCATTGAGTAAGAGCCATACTTTGTACTTC
TATGTAAGTATGACTTGTAACACATCGAGACAGTGGCTTAAGATTTTGTC
GATGCATCAACCTAGAAGTATCTTTGGAGACCCTTCATGGAGACACCACA
AGCCGAAACCGTGGCAAACGTTCAACTAGTACACATAGGCCTAGCCTCAA
AACCACCACCCACAACTGCAAGGTGCTGCCTTTGAATGTGCGCTTTGCTT
GCAGTTCTGGTTGCCATTGATTGAGAAGGCATGGGCCAAGCTGCACGGCT
GCTACGAGTACACTCACTATGGCCACACGCACCACGCGCTCATGGACATG
ACAGGTGGGTGCAATGATGAGGTTGGCCATCTTCAACTGGTAGCGCCGCT
ACTATGCCCCTCTGCTGCCTGCTGCACATTGCCACGCCTTCTGAGTCGTT
GCTTGTGA

Coding sequence (CDS) from alignment at Contig_164:116579..119286+

>mRNA_16490 ID=mRNA_16490|Name=jgi.p|Trimin1|178082|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=678bp|location=Sequence derived from alignment at Contig_164:116579..119286+ (Tribonema minus UTEX_B_3156 )
ATGCTCTCATCACAATCTCTGTGCTCGAGCAGCGAACTGGAGTTTACCGT
CATTGCCGGTCTGTGCAAGCTTCGCGGTACGAAGTACGTGGACCCCTCCT
TCTCTGTCCTGGCCAACCCCCGCGGCTGCCTCTTCATCAACGCTGATAAC
CCCAACCCGGAGATTCCTATACCGCCAAAGTGGCTGCGGCCTACTGACCT
GAGCTCAGACCCACAGCTTTTTGTTGACGGCGTGCTTGCAGGAGATATTC
AGCAAGGTGCTGTCGGCACATGCTACCTGCTGGGGGCCCTGGCAAGTCTG
TCAGCGCACACGGGGCACCTGGAGAGCATATTTGTGGCACACGACTTTGA
GGCTGGGGTGGTTGCCGTGCGCTTCTTCAACCACAACAGCTGGAAGTACG
TAATCATCGATGACATCATCGGCTGCAATGAGGATGGCAGCATTGCGTAC
TCGCACTGCAAGGACAAGAATGAGTTCTGGTTGCCATTGATTGAGAAGGC
ATGGGCCAAGCTGCACGGCTGCTACGAGTACACTCACTATGGCCACACGC
ACCACGCGCTCATGGACATGACAGGTGGGTGCAATGATGAGGTTGGCCAT
CTTCAACTGGTAGCGCCGCTACTATGCCCCTCTGCTGCCTGCTGCACATT
GCCACGCCTTCTGAGTCGTTGCTTGTGA