mRNA_16461 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|138298
Unique Name	mRNA_16461
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|138298 vs. uniprot
Match: A0A835Z624_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z624_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.980e-23
Identity = 860/860 (100.00%), Postives = 860/860 (100.00%), Query Frame = 1

Query:    1 GLNSAGGLTVTSGGASVTGDVTILTGGLYTTRVITAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGXARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGAVVXXXXXXXXXXXXXXXXXXXXXXXXSSGGLTVTSXXASXXXXXXXXXXXXXXXXXXXANSGAVXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGASVXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNSAGGLTVTSGXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATXGAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTVTSXXASXXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSGGASVXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGGLTVTSGXASXXXXXXXXXXXXXXXXXXXXTXGAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTVTSXXASXXXXXXXXXXXXXXXXXXXAMAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGAVXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGAA 2580
            GLNSAGGLTVTSGGASVTGDVTILTGGLYTTRVITAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGXARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGAVVXXXXXXXXXXXXXXXXXXXXXXXXSSGGLTVTSXXASXXXXXXXXXXXXXXXXXXXANSGAVXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGASVXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNSAGGLTVTSGXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATXGAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTVTSXXASXXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSGGASVXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGGLTVTSGXASXXXXXXXXXXXXXXXXXXXXTXGAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTVTSXXASXXXXXXXXXXXXXXXXXXXAMAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGAVXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGAA
Sbjct:    1 GLNSAGGLTVTSGGASVTGDVTILTGGLYTTRVITAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGXARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGAVVXXXXXXXXXXXXXXXXXXXXXXXXSSGGLTVTSXXASXXXXXXXXXXXXXXXXXXXANSGAVXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGASVXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNSAGGLTVTSGXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATXGAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTVTSXXASXXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSGGASVXXXXXXXXXXXXXXXXXXAMAGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGGLTVTSGXASXXXXXXXXXXXXXXXXXXXXTXGAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTVTSXXASXXXXXXXXXXXXXXXXXXXAMAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGAVXXXXXXXXXXXXXXXXXXXXXXXXNSAGGLTVTSGGAA 860

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|138298 vs. uniprot

BLAST of jgi.p|Trimin1|138298 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z624_9STRA	2.980e-23	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_162	contig	Contig_162:130300..135402 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|138298\|gw1.162.18.1
Hectar predicted targeting category	other localisation
TranscriptId	138620
Track	FilteredModels1
ProteinId	138298

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|138298	gene_16461	Tribonema minus UTEX_B_3156	gene	Contig_162 130300..135402 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|138298	Trimin1\|138298\|gw1.162.18.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_162 130300..135402 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16461_3	exon_16461_3	Tribonema minus UTEX_B_3156	exon	Contig_162 130300..130883 -
exon_16461_2	exon_16461_2	Tribonema minus UTEX_B_3156	exon	Contig_162 131109..132323 -
exon_16461_1	exon_16461_1	Tribonema minus UTEX_B_3156	exon	Contig_162 132549..135402 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16461	CDS_16461	Tribonema minus UTEX_B_3156	CDS	Contig_162 132549..135402 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_162:130300..135402-
coding sequence from alignment at Contig_162:130300..135402-

spliced messenger RNA

>mRNA_16461 ID=mRNA_16461|Name=jgi.p|Trimin1|138298|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4653bp|location=Sequence derived from alignment at Contig_162:130300..135402- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCTTGAACAGTGCAGGCGGGCTAACGGTGACATCAGGGGGTGCCAGTGT
GACCGGTGATGTTACAATCCTCACTGGTGGACTGTATACTACACGGGTCA
TCACAGCCATGGCTGGTGCGGTTGTTACCGGCGACGTCACCATCTTGACT
GGAGGCCTGCAGTCCACACGTGTCATAACAGCTTCTGCGGGCGCTGTGGT
AACAGGAGATGTGACCATCCTTACCGGCGGGTTGTATGCTGACAGGATCA
TCACAGCAACAGGTGGCTTGAACAGTGCAGGCGGCCTGACGGTAACTTCA
GGGGGTGCTCGAGTGACTGGCGACGTTACCATTCTCACCGGAGGGTTGCA
TGCGACGCAGATAATCACCGCCACAGGGGGACTCACCAGTGCAGGTGGCC
TGACAGTCATTACTGGAGGGGCTGCAGTTACAGGAGATGTCACCATTCTG
ACTGGAGGGCTGTTTGTTACTCGCGTCATCACAGCTACTGGTGGTGCTGT
GGTGACGGGGGATGTGACCATCCTTACTGGGGGGTTGCATGCCACTCAGA
TCATCACAGCAACTGGTGGCTTGCAGAGTTCAGGCGGCCTGACAGTGACA
TCGGGAGGGGCTAGCGTCACTGGAGACGTGACCATTCTCTCAGGAGGGCT
GTACACTACCAGAGTCGTAACAGCAAACAGTGGTGCCGTGGTGACTGGAG
ACGTAACCATCATTACTGGCGGCTTGTACGCTGATAGGGTCATAACGGCA
ACCGGCGGCCTGAATAGCGCAGGCGGGCTAACGGTGACATCAGGCGGTGC
TAGTGTGACCGGAGATGTTACCATCCTCACTGGTGGGCTTTACGCTACAC
GGGTGGTAACCGCCATGGCTGGTGCGGTCGTTACCGGCGACGTCACCATC
TTGACTGGAGGCCTGCAGTCCACACGTGTCATAACAGCTTCTGCTGGCGC
TGTGGTAACAGGAGATGTGACAATCCTTACCGGCGGGTTGTATGCTGACA
GGATCATCACAGCAACAGGTGGCTTGAACAGTGCAGGCGGCCTGACAGTG
ACGTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCATCCTTACAGGCGG
CCTTCAAGCTACGCGAATCATAACCGCCACGGGGGGACTCACCAGCGCAG
GCGGCTTGACAGTTACAACCGGAGGGGCTGCTGTCACAGGCGATGTCACC
ATTCTGACTGGAGGGCTGCTTGTTACGCGTGTCATCACAGCGACAGGTGG
CGCTGTAGTGACAGGTGATGTGACAGTGCTCAGCGGAGGTCTGCACGCTA
TTCAGATCATCACAGCAACCGGCGGTCTGCAGAGCGCAGGTGGCCTCACA
GTGACGTCGGGAGGAGCGAGCGTCACTGGGGATGTCACCATCCTCACTGG
TGGACTGTATGCCACACGGGTCATCACTGCCATGGCTGGTGCTGTGGTGA
CAGGAGACGTCACAATCGTGACTGGTGGCCTGTACGCTGATAAGGTCATC
ACAGCAACTGGTGGCCTCAACAGTGCAGGCGGCTTGACTGTGACATCAGG
GGGTGCCAGCGTGACCGGTGACGTTACAATTCTCACTGGTGGACTGTATA
CTACACGGGTCATAACAGCCATGGCAGGTGCGGTCGTGACAGGCGACGTA
ACCATCTTGACGGGGGGGCTGCAGTCCACACGTGTCATAACAGCCTCCGC
AGGCGCTTTCGTGACAGGTGATGTCACGATCATGACTGGAGGCTTGCATG
CAACTCAAGTCATCACGGCAACGGGTGGCCTGACTAGTGCAGGCGGCCTG
ACGGTGACATCAGGAGGGGCCAGCGTCACCGGAGACGTCACAATCCTCAC
TGGCGGGCTTTATGCCACACGGGTGATCACGGCCACAGGCGGTGCTGTTG
TGACCGGGGATGTCACCATTGTGACCGGCGGCTTGAATGCCGATAGGATA
ATCACTGCAACTGGTGGTCTAACCAGTGCAGGTGGCTTGACCGTAACATC
AGGGGGTGCCAGCGTGACCGGAGATATTACAATCCTCACTGGTGGGCTGT
ATGCTACACGGGTGGTAACAGCCATGGCTGGTGCGCTTGTTACCGGCGAC
GTCACCATCTTGACTGGAGGCCTGCAGTCCACACGTGTCATAACAGCTTC
TGCTGGTGCTGTTCTAACGGGAGACGTAACGATCCTGAGCGGAGGCCTGC
AAGCTACTCAGATCATCACAGCAACGGGTGGCTTGAACAGCGCTGGTGGT
TTGACGGTGACTTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCATCCT
TACAGGCGGTCTTCAAGCTACACGAATCATAACCGCCACGGGGGGACTCA
CCAGTGCAGGTGGCCTTACAGTTACAACTGGAGGGGCTGCTGTTACAGGC
GATGTGACAATACTCACCGGGGGCCTGTATTCTACGCGCGTCATAACGGC
CACTGCTGGTGCTGTGGTAACAGGAGATGTGACCATCCTCACGGGCGGGA
TGTATGCTGACAGGATCATTACAGCAACAGGTGGCCTGAACAGTGCAGGC
GGCCTGACAGTGACGTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCAT
CCTTACAGGCGGACTTCAAGCTACGCGAATCATAACCGCCACGGGAGGAC
TCACCAGTGCAGGTGGCCTGACAGTTACAACTGGAGGGGCTGCTGTCACA
GGAGATGTCACCATTCTGACCGGCGGGCTGTATGCTGCGCGTGTGATCAC
GGCCATTGGAGGACTCAATAGCTCGGGCGGCCTGACAGTGACAGGAGGAG
GTGCTGCTGTCACAGGCGACGTCACAATCCTGACTGGAGGCCTGTACTCC
ACACGTGGACTGACAGTCACAGCAGGAGGTGCTGCTGTGACTGGAGATGT
GACGATCTTGACCGGAGGTCTTTACTCTTCACGTGTCATAACGGCCTCTT
CAGGAGCTGTACTCACGGGCGATGTGACCATTCTCACCGGCGGGTTGTAT
GCGGACAGGATCATCACGGCAACTGGGGGCATGCAGAGTGCAGGCGGCCT
GACGGTTACATCAGGAGGGGCCGCTGTCACAGGAGATGTCACCATCCTGA
CTGGAGGCCTCCAGGCGACACGCGTCATTACCGCTTCCGGCGGCCTGAGC
AGTGCAGGCGGCCTGACGGTTACGTCTGGAGGAGCCAGCGTTACTGGAGA
CGTTACCATTCTGACCGGCGGGCTGTTTGCGGCGCGGGTGATAACGGCCG
CTGGAGGACTCAACAGCTCGGGTGGCCTGACAGTGACGGGAGGGGGTGCT
GCTGTCACAGGCGATGTGACGATACTGACAGGAGGATTACATTCCACACG
CGTCATAACCGCCTCTGCAGGCGCGGTGGTTACCGGAGATGTGACAATCC
TGAGCGGGGGGCTTCAAGCTTCACAGGTCATCACAGCAACAGGTGGCCTA
AACAGTGCAGGTGGCCTGACAGTGACATCAGGCGGTGCTGCAGTGACGGG
CGATGTCACCATCCTTACAGGCGGACTTTATGCTACGCGCATCATAACCG
CCACGGGGGGACTCAACAGCGCAGGTGGCCTGACAGTTACAACCGGAGGG
GCTGCCGTCACAGGAGATGTCACCATCCTTACCGGTGGCCTGCATTCTAC
GCGCGTCATAACGGCCACTGCTGGTGCTGTGGTAACAGGTGACGTCACAA
TCTTGACTGGAGGTTTGCATGCCACTCAGGTGATCACGGCCACTGGTGGC
ATGCAAAGCGCAGGCGGCCTAACAGTTACGTCAGGAGGGGCTGCTGTGAC
AGGTGATGTGACCATTGCTACAGGAGGTCTCCAATCAACACGCATCATCA
CCGCGTCTGGCGGCCTGAGCAGTGCAGGCGGTCTAACGGTGACATCTGGT
GGCGCCAGCATGACTGGGGATGTCACGATTTTGACTGGCGGGCTATATGC
AACACGCATCATCACGGCCGTTGCAGGACTCAGCAGCTTGGGCGGCCTGA
CAGTGTCGGGAGGGGGTGCTGCTGTCACTGGAGATGTCACAATCCTGACT
GGAGGCCTGTACTCCACACGTGGCCTGACAGTGATAGCAGGGGGTGCTGC
TGTGACTGGAGATGTGACGATCGTGACCGGAGGTCTTTATTCTTCCCGCG
TCATTACAGCCTCTGCCGGAGCTGTTCTCACAGGCGATGTGACCGTCCTC
ACTGGCGGGTTGTATGCTGACAGGATCATCACAGCAACAGGTGGCCTGAA
CAGTGCAGGCGGTCTAACGGTTACGTCAGGAGGGGCCGCTGTCACAGGAG
ATGTCACCATCCTGACCGGAGGGCTGTATGTCACGCGTGTCATAACAGCT
AATGGCGGAGCTGTGTTGACCGGCGATGTGACCGTACTGACGGGAGGCTT
GCATGCTACGCGCGTGATCACAGCGACCGGAGGCATCAGCAGCTCAGGTG
GCCTCACAGTCGTATCAGGCGGAGCCTTCGTGACAGATGCACTGACCGTC
TCTTCAAGCATATCATCTGGAGGGCTCCTCAGTAGTGCTGCAGGCGCTTC
AGTGACTGGAGACGTAACCATTTTGACGGGAGGCCTGCAGGCCACGCGCG
TCATCACAGCCACCGGTGGCCTCAGCAGTGCAGGTGGCCTGACGGTTGTG
TCA

protein sequence of jgi.p|Trimin1|138298

>Trimin1|138298|gw1.162.18.1 ID=Trimin1|138298|gw1.162.18.1|Name=jgi.p|Trimin1|138298|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1551bp
GLNSAGGLTVTSGGASVTGDVTILTGGLYTTRVITAMAGAVVTGDVTILT
GGLQSTRVITASAGAVVTGDVTILTGGLYADRIITATGGLNSAGGLTVTS
GGARVTGDVTILTGGLHATQIITATGGLTSAGGLTVITGGAAVTGDVTIL
TGGLFVTRVITATGGAVVTGDVTILTGGLHATQIITATGGLQSSGGLTVT
SGGASVTGDVTILSGGLYTTRVVTANSGAVVTGDVTIITGGLYADRVITA
TGGLNSAGGLTVTSGGASVTGDVTILTGGLYATRVVTAMAGAVVTGDVTI
LTGGLQSTRVITASAGAVVTGDVTILTGGLYADRIITATGGLNSAGGLTV
TSGGAAVTGDVTILTGGLQATRIITATGGLTSAGGLTVTTGGAAVTGDVT
ILTGGLLVTRVITATGGAVVTGDVTVLSGGLHAIQIITATGGLQSAGGLT
VTSGGASVTGDVTILTGGLYATRVITAMAGAVVTGDVTIVTGGLYADKVI
TATGGLNSAGGLTVTSGGASVTGDVTILTGGLYTTRVITAMAGAVVTGDV
TILTGGLQSTRVITASAGAFVTGDVTIMTGGLHATQVITATGGLTSAGGL
TVTSGGASVTGDVTILTGGLYATRVITATGGAVVTGDVTIVTGGLNADRI
ITATGGLTSAGGLTVTSGGASVTGDITILTGGLYATRVVTAMAGALVTGD
VTILTGGLQSTRVITASAGAVLTGDVTILSGGLQATQIITATGGLNSAGG
LTVTSGGAAVTGDVTILTGGLQATRIITATGGLTSAGGLTVTTGGAAVTG
DVTILTGGLYSTRVITATAGAVVTGDVTILTGGMYADRIITATGGLNSAG
GLTVTSGGAAVTGDVTILTGGLQATRIITATGGLTSAGGLTVTTGGAAVT
GDVTILTGGLYAARVITAIGGLNSSGGLTVTGGGAAVTGDVTILTGGLYS
TRGLTVTAGGAAVTGDVTILTGGLYSSRVITASSGAVLTGDVTILTGGLY
ADRIITATGGMQSAGGLTVTSGGAAVTGDVTILTGGLQATRVITASGGLS
SAGGLTVTSGGASVTGDVTILTGGLFAARVITAAGGLNSSGGLTVTGGGA
AVTGDVTILTGGLHSTRVITASAGAVVTGDVTILSGGLQASQVITATGGL
NSAGGLTVTSGGAAVTGDVTILTGGLYATRIITATGGLNSAGGLTVTTGG
AAVTGDVTILTGGLHSTRVITATAGAVVTGDVTILTGGLHATQVITATGG
MQSAGGLTVTSGGAAVTGDVTIATGGLQSTRIITASGGLSSAGGLTVTSG
GASMTGDVTILTGGLYATRIITAVAGLSSLGGLTVSGGGAAVTGDVTILT
GGLYSTRGLTVIAGGAAVTGDVTIVTGGLYSSRVITASAGAVLTGDVTVL
TGGLYADRIITATGGLNSAGGLTVTSGGAAVTGDVTILTGGLYVTRVITA
NGGAVLTGDVTVLTGGLHATRVITATGGISSSGGLTVVSGGAFVTDALTV
SSSISSGGLLSSAAGASVTGDVTILTGGLQATRVITATGGLSSAGGLTVV
S

mRNA from alignment at Contig_162:130300..135402-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16461 ID=mRNA_16461|Name=jgi.p|Trimin1|138298|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5103bp|location=Sequence derived from alignment at Contig_162:130300..135402- (Tribonema minus UTEX_B_3156 )
GGCTTGAACAGTGCAGGCGGGCTAACGGTGACATCAGGGGGTGCCAGTGT
GACCGGTGATGTTACAATCCTCACTGGTGGACTGTATACTACACGGGTCA
TCACAGCCATGGCTGGTGCGGTTGTTACCGGCGACGTCACCATCTTGACT
GGAGGCCTGCAGTCCACACGTGTCATAACAGCTTCTGCGGGCGCTGTGGT
AACAGGAGATGTGACCATCCTTACCGGCGGGTTGTATGCTGACAGGATCA
TCACAGCAACAGGTGGCTTGAACAGTGCAGGCGGCCTGACGGTAACTTCA
GGGGGTGCTCGAGTGACTGGCGACGTTACCATTCTCACCGGAGGGTTGCA
TGCGACGCAGATAATCACCGCCACAGGGGGACTCACCAGTGCAGGTGGCC
TGACAGTCATTACTGGAGGGGCTGCAGTTACAGGAGATGTCACCATTCTG
ACTGGAGGGCTGTTTGTTACTCGCGTCATCACAGCTACTGGTGGTGCTGT
GGTGACGGGGGATGTGACCATCCTTACTGGGGGGTTGCATGCCACTCAGA
TCATCACAGCAACTGGTGGCTTGCAGAGTTCAGGCGGCCTGACAGTGACA
TCGGGAGGGGCTAGCGTCACTGGAGACGTGACCATTCTCTCAGGAGGGCT
GTACACTACCAGAGTCGTAACAGCAAACAGTGGTGCCGTGGTGACTGGAG
ACGTAACCATCATTACTGGCGGCTTGTACGCTGATAGGGTCATAACGGCA
ACCGGCGGCCTGAATAGCGCAGGCGGGCTAACGGTGACATCAGGCGGTGC
TAGTGTGACCGGAGATGTTACCATCCTCACTGGTGGGCTTTACGCTACAC
GGGTGGTAACCGCCATGGCTGGTGCGGTCGTTACCGGCGACGTCACCATC
TTGACTGGAGGCCTGCAGTCCACACGTGTCATAACAGCTTCTGCTGGCGC
TGTGGTAACAGGAGATGTGACAATCCTTACCGGCGGGTTGTATGCTGACA
GGATCATCACAGCAACAGGTGGCTTGAACAGTGCAGGCGGCCTGACAGTG
ACGTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCATCCTTACAGGCGG
CCTTCAAGCTACGCGAATCATAACCGCCACGGGGGGACTCACCAGCGCAG
GCGGCTTGACAGTTACAACCGGAGGGGCTGCTGTCACAGGCGATGTCACC
ATTCTGACTGGAGGGCTGCTTGTTACGCGTGTCATCACAGCGACAGGTGG
CGCTGTAGTGACAGGTGATGTGACAGTGCTCAGCGGAGGTCTGCACGCTA
TTCAGATCATCACAGCAACCGGCGGTCTGCAGAGCGCAGGTGGCCTCACA
GTGACGTCGGGAGGAGCGAGCGTCACTGGGGATGTCACCATCCTCACTGG
TGGACTGTATGCCACACGGGTCATCACTGCCATGGCTGGTGCTGTGGTGA
CAGGAGACGTCACAATCGTGACTGGTGGCCTGTACGCTGATAAGGTCATC
ACAGCAACTGGTGGCCTCAACAGTGCAGGCGGCTTGACTGTGACATCAGG
GGGTGCCAGCGTGACCGGTGACGTTACAATTCTCACTGGTGGACTGTATA
CTACACGGGTCATAACAGCCATGGCAGGTGCGGTCGTGACAGGCGACGTA
ACCATCTTGACGGGGGGGCTGCAGTCCACACGTGTCATAACAGCCTCCGC
AGGCGCTTTCGTGACAGGTGATGTCACGATCATGACTGGAGGCTTGCATG
CAACTCAAGTCATCACGGCAACGGGTGGCCTGACTAGTGCAGGCGGCCTG
ACGGTGACATCAGGAGGGGCCAGCGTCACCGGAGACGTCACAATCCTCAC
TGGCGGGCTTTATGCCACACGGGTGATCACGGCCACAGGCGGTGCTGTTG
TGACCGGGGATGTCACCATTGTGACCGGCGGCTTGAATGCCGATAGGATA
ATCACTGCAACTGGTGGTCTAACCAGTGCAGGTGGCTTGACCGTAACATC
AGGGGGTGCCAGCGTGACCGGAGATATTACAATCCTCACTGGTGGGCTGT
ATGCTACACGGGTGGTAACAGCCATGGCTGGTGCGCTTGTTACCGGCGAC
GTCACCATCTTGACTGGAGGCCTGCAGTCCACACGTGTCATAACAGCTTC
TGCTGGTGCTGTTCTAACGGGAGACGTAACGATCCTGAGCGGAGGCCTGC
AAGCTACTCAGATCATCACAGCAACGGGTGGCTTGAACAGCGCTGGTGGT
TTGACGGTGACTTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCATCCT
TACAGGCGGTCTTCAAGCTACACGAATCATAACCGCCACGGGGGGACTCA
CCAGTGCAGGTGGCCTTACAGTTACAACTGGAGGGGCTGCTGTTACAGGC
GATGTGACAATACTCACCGGGGGCCTGTATTCTACGCGCGTCATAACGGC
CACTGCTGGTGCTGTGGTAACAGGAGATGTGACCATCCTCACGGGCGGGA
TGTATGCTGACAGGATCATTACAGCAACAGGTGGCCTGAACAGTGCAGGC
GGCCTGACAGTGACGTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCAT
CCTTACAGGCGGACTTCAAGCTACGCGAATCATAACCGCCACGGGAGGAC
TCACCAGTGCAGGTGGCCTGACAGTTACAACTGGAGGGGCTGCTGTCACA
GGAGATGTCACCATTCTGACCGGCGGGCTGTATGCTGCGCGTGTGATCAC
GGCCATTGGAGGACTCAATAGCTCGGGCGGCCTGACAGTGACAGGAGGAG
GTGCTGCTGTCACAGGCGACGTCACAATCCTGACTGGAGGCCTGTACTCC
ACACGTGTCATAACAGCGTCTGCTGGTGCTGTGGTAACAGGAGATGTGAC
CATCCTCACCGGCGGCTTGTATGCTGACAGGATCATCACAGCAACTGGTG
GCTTGACCAGTGCAGCTAGCCTGACAGTGACATCAGGGGGTGCTAGAGTG
ACTGGAGACGTGACTATTCTCACCGGCGGGTTGCATGCGACGCAGATCAT
CACTGCCACAGGGGGACTCAACAGCGCAGGTGGACTGACAGTCACAGCAG
GAGGTGCTGCTGTGACTGGAGATGTGACGATCTTGACCGGAGGTCTTTAC
TCTTCACGTGTCATAACGGCCTCTTCAGGAGCTGTACTCACGGGCGATGT
GACCATTCTCACCGGCGGGTTGTATGCGGACAGGATCATCACGGCAACTG
GGGGCATGCAGAGTGCAGGCGGCCTGACGGTTACATCAGGAGGGGCCGCT
GTCACAGGAGATGTCACCATCCTGACTGGAGGCCTCCAGGCGACACGCGT
CATTACCGCTTCCGGCGGCCTGAGCAGTGCAGGCGGCCTGACGGTTACGT
CTGGAGGAGCCAGCGTTACTGGAGACGTTACCATTCTGACCGGCGGGCTG
TTTGCGGCGCGGGTGATAACGGCCGCTGGAGGACTCAACAGCTCGGGTGG
CCTGACAGTGACGGGAGGGGGTGCTGCTGTCACAGGCGATGTGACGATAC
TGACAGGAGGATTACATTCCACACGCGTCATAACCGCCTCTGCAGGCGCG
GTGGTTACCGGAGATGTGACAATCCTGAGCGGGGGGCTTCAAGCTTCACA
GGTCATCACAGCAACAGGTGGCCTAAACAGTGCAGGTGGCCTGACAGTGA
CATCAGGCGGTGCTGCAGTGACGGGCGATGTCACCATCCTTACAGGCGGA
CTTTATGCTACGCGCATCATAACCGCCACGGGGGGACTCAACAGCGCAGG
TGGCCTGACAGTTACAACCGGAGGGGCTGCCGTCACAGGAGATGTCACCA
TCCTTACCGGTGGCCTGCATTCTACGCGCGTCATAACGGCCACTGCTGGT
GCTGTGGTAACAGGTGACGTCACAATCTTGACTGGAGGTTTGCATGCCAC
TCAGGTGATCACGGCCACTGGTGGCATGCAAAGCGCAGGCGGCCTAACAG
TTACGTCAGGAGGGGCTGCTGTGACAGGTGATGTGACCATTGCTACAGGA
GGTCTCCAATCAACACGCATCATCACCGCGTCTGGCGGCCTGAGCAGTGC
AGGCGGTCTAACGGTGACATCTGGTGGCGCCAGCATGACTGGGGATGTCA
CGATTTTGACTGGCGGGCTATATGCAACACGCATCATCACGGCCGTTGCA
GGACTCAGCAGCTTGGGCGGCCTGACAGTGTCGGGAGGGGGTGCTGCTGT
CACTGGAGATGTCACAATCCTGACTGGAGGCCTGTACTCCACACGTGTCA
TAACAGCCTCCGCAGGCGCGGTGCTTACCGGGGATGTGACAATCCTAACT
GGGGGGTTGCATGCAGCTCAAGTGATCACAGCAACTGGTGGCCTGACCAG
TGCTGGAGGTCTCACCGTAACATCAGGCGGTGCTCGAGTGAGTGGGGACG
TGACTATTCTCACCGGAGGGTTGCATGCGACGCAAGTAATCACTGCCACA
GGGGGAGTCAACAGCGCAGGTGGCCTGACAGTGATAGCAGGGGGTGCTGC
TGTGACTGGAGATGTGACGATCGTGACCGGAGGTCTTTATTCTTCCCGCG
TCATTACAGCCTCTGCCGGAGCTGTTCTCACAGGCGATGTGACCGTCCTC
ACTGGCGGGTTGTATGCTGACAGGATCATCACAGCAACAGGTGGCCTGAA
CAGTGCAGGCGGTCTAACGGTTACGTCAGGAGGGGCCGCTGTCACAGGAG
ATGTCACCATCCTGACCGGAGGGCTGTATGTCACGCGTGTCATAACAGCT
AATGGCGGAGCTGTGTTGACCGGCGATGTGACCGTACTGACGGGAGGCTT
GCATGCTACGCGCGTGATCACAGCGACCGGAGGCATCAGCAGCTCAGGTG
GCCTCACAGTCGTATCAGGCGGAGCCTTCGTGACAGATGCACTGACCGTC
TCTTCAAGCATATCATCTGGAGGGCTCCTCAGTAGTGCTGCAGGCGCTTC
AGTGACTGGAGACGTAACCATTTTGACGGGAGGCCTGCAGGCCACGCGCG
TCATCACAGCCACCGGTGGCCTCAGCAGTGCAGGTGGCCTGACGGTTGTG
TCA

Coding sequence (CDS) from alignment at Contig_162:130300..135402-

>mRNA_16461 ID=mRNA_16461|Name=jgi.p|Trimin1|138298|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=4653bp|location=Sequence derived from alignment at Contig_162:130300..135402- (Tribonema minus UTEX_B_3156 )
GGCTTGAACAGTGCAGGCGGGCTAACGGTGACATCAGGGGGTGCCAGTGT
GACCGGTGATGTTACAATCCTCACTGGTGGACTGTATACTACACGGGTCA
TCACAGCCATGGCTGGTGCGGTTGTTACCGGCGACGTCACCATCTTGACT
GGAGGCCTGCAGTCCACACGTGTCATAACAGCTTCTGCGGGCGCTGTGGT
AACAGGAGATGTGACCATCCTTACCGGCGGGTTGTATGCTGACAGGATCA
TCACAGCAACAGGTGGCTTGAACAGTGCAGGCGGCCTGACGGTAACTTCA
GGGGGTGCTCGAGTGACTGGCGACGTTACCATTCTCACCGGAGGGTTGCA
TGCGACGCAGATAATCACCGCCACAGGGGGACTCACCAGTGCAGGTGGCC
TGACAGTCATTACTGGAGGGGCTGCAGTTACAGGAGATGTCACCATTCTG
ACTGGAGGGCTGTTTGTTACTCGCGTCATCACAGCTACTGGTGGTGCTGT
GGTGACGGGGGATGTGACCATCCTTACTGGGGGGTTGCATGCCACTCAGA
TCATCACAGCAACTGGTGGCTTGCAGAGTTCAGGCGGCCTGACAGTGACA
TCGGGAGGGGCTAGCGTCACTGGAGACGTGACCATTCTCTCAGGAGGGCT
GTACACTACCAGAGTCGTAACAGCAAACAGTGGTGCCGTGGTGACTGGAG
ACGTAACCATCATTACTGGCGGCTTGTACGCTGATAGGGTCATAACGGCA
ACCGGCGGCCTGAATAGCGCAGGCGGGCTAACGGTGACATCAGGCGGTGC
TAGTGTGACCGGAGATGTTACCATCCTCACTGGTGGGCTTTACGCTACAC
GGGTGGTAACCGCCATGGCTGGTGCGGTCGTTACCGGCGACGTCACCATC
TTGACTGGAGGCCTGCAGTCCACACGTGTCATAACAGCTTCTGCTGGCGC
TGTGGTAACAGGAGATGTGACAATCCTTACCGGCGGGTTGTATGCTGACA
GGATCATCACAGCAACAGGTGGCTTGAACAGTGCAGGCGGCCTGACAGTG
ACGTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCATCCTTACAGGCGG
CCTTCAAGCTACGCGAATCATAACCGCCACGGGGGGACTCACCAGCGCAG
GCGGCTTGACAGTTACAACCGGAGGGGCTGCTGTCACAGGCGATGTCACC
ATTCTGACTGGAGGGCTGCTTGTTACGCGTGTCATCACAGCGACAGGTGG
CGCTGTAGTGACAGGTGATGTGACAGTGCTCAGCGGAGGTCTGCACGCTA
TTCAGATCATCACAGCAACCGGCGGTCTGCAGAGCGCAGGTGGCCTCACA
GTGACGTCGGGAGGAGCGAGCGTCACTGGGGATGTCACCATCCTCACTGG
TGGACTGTATGCCACACGGGTCATCACTGCCATGGCTGGTGCTGTGGTGA
CAGGAGACGTCACAATCGTGACTGGTGGCCTGTACGCTGATAAGGTCATC
ACAGCAACTGGTGGCCTCAACAGTGCAGGCGGCTTGACTGTGACATCAGG
GGGTGCCAGCGTGACCGGTGACGTTACAATTCTCACTGGTGGACTGTATA
CTACACGGGTCATAACAGCCATGGCAGGTGCGGTCGTGACAGGCGACGTA
ACCATCTTGACGGGGGGGCTGCAGTCCACACGTGTCATAACAGCCTCCGC
AGGCGCTTTCGTGACAGGTGATGTCACGATCATGACTGGAGGCTTGCATG
CAACTCAAGTCATCACGGCAACGGGTGGCCTGACTAGTGCAGGCGGCCTG
ACGGTGACATCAGGAGGGGCCAGCGTCACCGGAGACGTCACAATCCTCAC
TGGCGGGCTTTATGCCACACGGGTGATCACGGCCACAGGCGGTGCTGTTG
TGACCGGGGATGTCACCATTGTGACCGGCGGCTTGAATGCCGATAGGATA
ATCACTGCAACTGGTGGTCTAACCAGTGCAGGTGGCTTGACCGTAACATC
AGGGGGTGCCAGCGTGACCGGAGATATTACAATCCTCACTGGTGGGCTGT
ATGCTACACGGGTGGTAACAGCCATGGCTGGTGCGCTTGTTACCGGCGAC
GTCACCATCTTGACTGGAGGCCTGCAGTCCACACGTGTCATAACAGCTTC
TGCTGGTGCTGTTCTAACGGGAGACGTAACGATCCTGAGCGGAGGCCTGC
AAGCTACTCAGATCATCACAGCAACGGGTGGCTTGAACAGCGCTGGTGGT
TTGACGGTGACTTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCATCCT
TACAGGCGGTCTTCAAGCTACACGAATCATAACCGCCACGGGGGGACTCA
CCAGTGCAGGTGGCCTTACAGTTACAACTGGAGGGGCTGCTGTTACAGGC
GATGTGACAATACTCACCGGGGGCCTGTATTCTACGCGCGTCATAACGGC
CACTGCTGGTGCTGTGGTAACAGGAGATGTGACCATCCTCACGGGCGGGA
TGTATGCTGACAGGATCATTACAGCAACAGGTGGCCTGAACAGTGCAGGC
GGCCTGACAGTGACGTCAGGCGGTGCTGCAGTGACAGGAGATGTCACCAT
CCTTACAGGCGGACTTCAAGCTACGCGAATCATAACCGCCACGGGAGGAC
TCACCAGTGCAGGTGGCCTGACAGTTACAACTGGAGGGGCTGCTGTCACA
GGAGATGTCACCATTCTGACCGGCGGGCTGTATGCTGCGCGTGTGATCAC
GGCCATTGGAGGACTCAATAGCTCGGGCGGCCTGACAGTGACAGGAGGAG
GTGCTGCTGTCACAGGCGACGTCACAATCCTGACTGGAGGCCTGTACTCC
ACACGTGGACTGACAGTCACAGCAGGAGGTGCTGCTGTGACTGGAGATGT
GACGATCTTGACCGGAGGTCTTTACTCTTCACGTGTCATAACGGCCTCTT
CAGGAGCTGTACTCACGGGCGATGTGACCATTCTCACCGGCGGGTTGTAT
GCGGACAGGATCATCACGGCAACTGGGGGCATGCAGAGTGCAGGCGGCCT
GACGGTTACATCAGGAGGGGCCGCTGTCACAGGAGATGTCACCATCCTGA
CTGGAGGCCTCCAGGCGACACGCGTCATTACCGCTTCCGGCGGCCTGAGC
AGTGCAGGCGGCCTGACGGTTACGTCTGGAGGAGCCAGCGTTACTGGAGA
CGTTACCATTCTGACCGGCGGGCTGTTTGCGGCGCGGGTGATAACGGCCG
CTGGAGGACTCAACAGCTCGGGTGGCCTGACAGTGACGGGAGGGGGTGCT
GCTGTCACAGGCGATGTGACGATACTGACAGGAGGATTACATTCCACACG
CGTCATAACCGCCTCTGCAGGCGCGGTGGTTACCGGAGATGTGACAATCC
TGAGCGGGGGGCTTCAAGCTTCACAGGTCATCACAGCAACAGGTGGCCTA
AACAGTGCAGGTGGCCTGACAGTGACATCAGGCGGTGCTGCAGTGACGGG
CGATGTCACCATCCTTACAGGCGGACTTTATGCTACGCGCATCATAACCG
CCACGGGGGGACTCAACAGCGCAGGTGGCCTGACAGTTACAACCGGAGGG
GCTGCCGTCACAGGAGATGTCACCATCCTTACCGGTGGCCTGCATTCTAC
GCGCGTCATAACGGCCACTGCTGGTGCTGTGGTAACAGGTGACGTCACAA
TCTTGACTGGAGGTTTGCATGCCACTCAGGTGATCACGGCCACTGGTGGC
ATGCAAAGCGCAGGCGGCCTAACAGTTACGTCAGGAGGGGCTGCTGTGAC
AGGTGATGTGACCATTGCTACAGGAGGTCTCCAATCAACACGCATCATCA
CCGCGTCTGGCGGCCTGAGCAGTGCAGGCGGTCTAACGGTGACATCTGGT
GGCGCCAGCATGACTGGGGATGTCACGATTTTGACTGGCGGGCTATATGC
AACACGCATCATCACGGCCGTTGCAGGACTCAGCAGCTTGGGCGGCCTGA
CAGTGTCGGGAGGGGGTGCTGCTGTCACTGGAGATGTCACAATCCTGACT
GGAGGCCTGTACTCCACACGTGGCCTGACAGTGATAGCAGGGGGTGCTGC
TGTGACTGGAGATGTGACGATCGTGACCGGAGGTCTTTATTCTTCCCGCG
TCATTACAGCCTCTGCCGGAGCTGTTCTCACAGGCGATGTGACCGTCCTC
ACTGGCGGGTTGTATGCTGACAGGATCATCACAGCAACAGGTGGCCTGAA
CAGTGCAGGCGGTCTAACGGTTACGTCAGGAGGGGCCGCTGTCACAGGAG
ATGTCACCATCCTGACCGGAGGGCTGTATGTCACGCGTGTCATAACAGCT
AATGGCGGAGCTGTGTTGACCGGCGATGTGACCGTACTGACGGGAGGCTT
GCATGCTACGCGCGTGATCACAGCGACCGGAGGCATCAGCAGCTCAGGTG
GCCTCACAGTCGTATCAGGCGGAGCCTTCGTGACAGATGCACTGACCGTC
TCTTCAAGCATATCATCTGGAGGGCTCCTCAGTAGTGCTGCAGGCGCTTC
AGTGACTGGAGACGTAACCATTTTGACGGGAGGCCTGCAGGCCACGCGCG
TCATCACAGCCACCGGTGGCCTCAGCAGTGCAGGTGGCCTGACGGTTGTG
TCA