Trimin1|353418|estExt_Genemark1.C_Ctg_1610065 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353418
Unique NameTrimin1|353418|estExt_Genemark1.C_Ctg_1610065
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length396
Homology
BLAST of jgi.p|Trimin1|353418 vs. uniprot
Match: A0A835Z668_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z668_9STRA)

HSP 1 Score: 704 bits (1816), Expect = 1.190e-254
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
Query:    1 MANTFTIFNIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGSVEGSVYIPFSLDAIDARALRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQRPGGAXXXXXXXXXXXXXLPGLRSAGGAVGVAEPRTLRVDACGGRCTFAAPSGVFALDEDIAGDFVVDNLAAPGAAAAALLLVELEGVGGAYEERVALAHPLFGALTRDVGAAPAAPGAAAXXXXXXXXXXXXXXXAGDAILAAEAGSNAVPPGGVTGTHAPQRVAVALARAPLHPTFAVSVEQGGRACELRYLLRLVVEDDGGRTFTDATEVVLYRRRVSANVRPRA 395
            MANTFTIFNIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGSVEGSVYIPFSLDAIDARALRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQRPGGAXXXXXXXXXXXXXLPGLRSAGGAVGVAEPRTLRVDACGGRCTFAAPSGVFALDEDIAGDFVVDNLAAPGAAAAALLLVELEGVGGAYEERVALAHPLFGALTRDVGAAPAAPGAAAXXXXXXXXXXXXXXXAGDAILAAEAGSNAVPPGGVTGTHAPQRVAVALARAPLHPTFAVSVEQGGRACELRYLLRLVVEDDGGRTFTDATEVVLYRRRVSANVRPRA
Sbjct:    1 MANTFTIFNIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGSVEGSVYIPFSLDAIDARALRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQRPGGAXXXXXXXXXXXXXLPGLRSAGGAVGVAEPRTLRVDACGGRCTFAAPSGVFALDEDIAGDFVVDNLAAPGAAAAALLLVELEGVGGAYEERVALAHPLFGALTRDVGAAPAAPGAAAXXXXXXXXXXXXXXXAGDAILAAEAGSNAVPPGGVTGTHAPQRVAVALARAPLHPTFAVSVEQGGRACELRYLLRLVVEDDGGRTFTDATEVVLYRRRVSANVRPRA 395          
BLAST of jgi.p|Trimin1|353418 vs. uniprot
Match: A0A6V1K188_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K188_HETAK)

HSP 1 Score: 113 bits (283), Expect = 1.650e-24
Identity = 86/267 (32.21%), Postives = 121/267 (45.32%), Query Frame = 0
Query:    6 TIFNIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGSVEGSVYIPFSLDA--IDARALRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQRPGGAXXXXXXXXXXXXXLPGLRSAGGAVGVAEPRTLRVDACGGRCTFAAPSGVFALDEDIAGDFVVDNLAAPGAAAAALLLVELEGVGGAYEERVALAHPLF 270
            TIFN GGPGWF DVFE++IV+D      DP D F++P +A        + + T  I G + + +P   KV++  ++++L EY        ++E  +    V  PG V+G+  I FSLD   I      E Y G+L +LRH L  TV RP +TF V     V LQR   A              PG            P  L+V   GG C        + L   + G   +  LAAP   +  +LL+++E   G   E + L H L 
Sbjct:    4 TIFNFGGPGWFADVFELEIVLDKQCEVDDPGDPFVLPWNAW--TGKCFLFETTDVITGIVKITSPANRKVWHNVITVRLEEYLVGPESYGSSESCALEIEVKEPGYVKGTEEIKFSLDLNEIQGAQWNEWYAGKLLSLRHVLAVTVERPWYTFDVARQLVVGLQRVDPA--------------PGTSQGEPTEEGVVPHVLQVLDAGGVCNLDYRIDSYDLGATVRGAVHLAGLAAP-VVSVRVLLIQVEFADGDVYESILLEHTLI 253          
BLAST of jgi.p|Trimin1|353418 vs. uniprot
Match: D8LJC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC5_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.080e-15
Identity = 73/274 (26.64%), Postives = 121/274 (44.16%), Query Frame = 0
Query:    9 NIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGS-VEGSVYIPFSLDA--IDARA---LRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQRPGGAXXXXXXXXXXXXXLPGLRSAGGAVGVAEPRTLRVDACGGRCTFAAPSGVFALDEDIAGDFVVDNLAAPGAAAAALLLVELEGVGGAYEERVALAHPLFGALTRD 276
            N+GGPGWF+DVF++ + VD+D ++ D     +VP +     +  P++D +  I G + V AP   +V+  G+++   E+  T+  + T EL       +  G  +       F+LD   +D      +RETY G L ALRH L  +  RP +TF V +   +A++    A                    GG         L +  C GRC F      F L + + G     ++ +P   AA ++L+  E + G   E +   H + G   ++
Sbjct:  163 NLGGPGWFNDVFKISVEVDSDRTWMDTLSLSLVPRNVFQ--RHCPLLDTSENITGTVTVTAPTSKRVWMSGITVTFEEHLMTVD-SDTGELVGALEAQVATGQFINDKAVFSFNLDLGLLDGHRRWPVRETYVGDLMALRHRLMVSAQRPWYTFNVYSQLPLAMEYLSSAPDEDAGQE---------NEEGG-----PNHVLVISDCNGRCDFDFGVDSFNLGDVLQGTVRFTDVTSP-IVAAHVMLLRAEFMYGEASEVLVAEHTILGECRKE 418          
BLAST of jgi.p|Trimin1|353418 vs. uniprot
Match: A0A6H5KSM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM1_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.480e-15
Identity = 73/274 (26.64%), Postives = 120/274 (43.80%), Query Frame = 0
Query:    9 NIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGS-VEGSVYIPFSLD-----AIDARALRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQRPGGAXXXXXXXXXXXXXLPGLRSAGGAVGVAEPRTLRVDACGGRCTFAAPSGVFALDEDIAGDFVVDNLAAPGAAAAALLLVELEGVGGAYEERVALAHPLFGALTRD 276
            N+GGPGWF+DVF++ + VD+D ++ D     +VP +     +  P++D +  I G + V AP   +V+  GV++   E+  T+  + T E+       +  G  ++      F+LD           +RETY G L ALRH L  +  RP +TF V +   +A++    A                    GG         L +  C GRC F      F L + + G     ++A P   AA ++L+  E + G   E +   H + G   ++
Sbjct:  126 NLGGPGWFNDVFKISVEVDSDRTWMDTLSLSLVPRNVFR--RHCPLLDTSENITGTVTVMAPTSKRVWMSGVTVTFEEHLMTVD-SDTGEIVGALEAQVATGQFIKDKAVFSFNLDLGLLSGHRRWPVRETYVGDLMALRHRLMVSAQRPWYTFNVYSQLPLAMEYLSNAPDEDAGQD---------NEEGG-----PNHVLVISDCNGRCEFDFGVDSFNLGDVLQGTVRFTDVALP-IVAAHVMLLRAEFMYGEASEVLVAEHTILGECRKE 381          
BLAST of jgi.p|Trimin1|353418 vs. uniprot
Match: F0YHX4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHX4_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 2.020e-11
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 0
Query:    8 FNIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGS---VEGSVYIPFSLDAIDAR---ALRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQR 168
            FN GGPGWFHDV E+++ +DTD   + P D +++P S +       I D    I G + + +PP  +V+   V + + ++          +LA     + G  +   V G+V +PF LD  D      LR TY G L+ +R  + AT  RP + +       V LQ+
Sbjct:   17 FNFGGPGWFHDVVEMEMHLDTDNVIRHPEDPYLMPYSEYGECATYKIDD---KITGVVSITSPPDAQVWITEVLVNVEQFAQFQRSVDGYQLAYRECVIPGTENGLLVAGTVELPFELDLKDVYPHGCLRPTYTGSLYYIRQHVAATAKRPWFGYDCEVRLPVHLQQ 180          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353418 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835Z668_9STRA1.190e-254100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1K188_HETAK1.650e-2432.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LJC5_ECTSI1.080e-1526.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSM1_9PHAE2.480e-1526.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YHX4_AURAN2.020e-1131.14Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014752Arrestin-like, C-terminalGENE3D2.60.40.640coord: 23..168
e-value: 3.7E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_161contigContig_161:335878..337750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353418mRNA_13153Tribonema minus UTEX_B_3156 mRNAContig_161 335552..337872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353418|estExt_Genemark1.C_Ctg_1610065 ID=Trimin1|353418|estExt_Genemark1.C_Ctg_1610065|Name=jgi.p|Trimin1|353418|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=396bp
MANTFTIFNIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDK
PTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELA
SHAHPVIGPGSVEGSVYIPFSLDAIDARALRETYPGRLFALRHTLTATVA
RPRWTFPVVAHQAVALQRPGGAGAAAAAAAAAPAPLPGLRSAGGAVGVAE
PRTLRVDACGGRCTFAAPSGVFALDEDIAGDFVVDNLAAPGAAAAALLLV
ELEGVGGAYEERVALAHPLFGALTRDVGAAPAAPGAAAAAAAAPGAGSAP
TAAAGDAILAAEAGSNAVPPGGVTGTHAPQRVAVALARAPLHPTFAVSVE
QGGRACELRYLLRLVVEDDGGRTFTDATEVVLYRRRVSANVRPRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014752Arrestin-like_C