Trimin1|353415|estExt_Genemark1.C_Ctg_1610061 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353415
Unique NameTrimin1|353415|estExt_Genemark1.C_Ctg_1610061
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length679
Homology
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Match: A0A835Z9H4_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9H4_9STRA)

HSP 1 Score: 1174 bits (3037), Expect = 0.000e+0
Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 0
Query:    1 MVVRRAATAXXXXXXXXXPPAAFGSPVRINEHLTAADLDSWRKTAQDTLQAGPELRSLSDADHALRILTNLDAGAEEFGHIWCGAAAVGMHGGQGLSSIYHGIQVAEALGCGIPDSLSTVARDLVAQGLYGTKLEGLYYAALVSQKKGSPPLDLVKRVAVLVESSGLVAGDDTPDSLPTQDNAYPAAELLALLAELAPADSAARADAAHALANIASLLPSXXXXXXXXXLLLHPLTSTPXXXXXXXPALERGGAALLRAAAAQLLSLRRCGGDAAAAWRVHAALRALAARADAPLAVAFAPPSVSAGALRSGGGGAAAGLSVRTLLGAEPSDVAGIVVRSLRPHGTKAGEENLLGGPVVAAAAAASGTGVWTAKGLESVAPGRYIAEVSIARGDGAQEETVSAPLVVTGAASVAAVRFAVNGEDVRGGRAKAGARDRLSVAFALEGDVAAPQQCSVRLRHAASGLSTYYSAQRSGGGARPGEYAATVDLSKEAAQLQHRSGDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEFEQPKPQEWPLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVRPERPSGGVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKALVGLDAPRESPQE 678
            MVVRRAATAXXXXXXXXXPPAAFGSPVRINEHLTAADLDSWRKTAQDTLQAGPELRSLSDADHALRILTNLDAGAEEFGHIWCGAAAVGMHGGQGLSSIYHGIQVAEALGCGIPDSLSTVARDLVAQGLYGTKLEGLYYAALVSQKKGSPPLDLVKRVAVLVESSGLVAGDDTPDSLPTQDNAYPAAELLALLAELAPADSAARADAAHALANIASLLPSXXXXXXXXXLLLHPLTSTPXXXXXXXPALERGGAALLRAAAAQLLSLRRCGGDAAAAWRVHAALRALAARADAPLAVAFAPPSVSAGALRSGGGGAAAGLSVRTLLGAEPSDVAGIVVRSLRPHGTKAGEENLLGGPVVAAAAAASGTGVWTAKGLESVAPGRYIAEVSIARGDGAQEETVSAPLVVTGAASVAAVRFAVNGEDVRGGRAKAGARDRLSVAFALEGDVAAPQQCSVRLRHAASGLSTYYSAQRSGGGARPGEYAATVDLSKEAAQLQHRSGDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEFEQPKPQEWPLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVRPERPSGGVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKALVGLDAPRESPQE
Sbjct:    1 MVVRRAATAXXXXXXXXXPPAAFGSPVRINEHLTAADLDSWRKTAQDTLQAGPELRSLSDADHALRILTNLDAGAEEFGHIWCGAAAVGMHGGQGLSSIYHGIQVAEALGCGIPDSLSTVARDLVAQGLYGTKLEGLYYAALVSQKKGSPPLDLVKRVAVLVESSGLVAGDDTPDSLPTQDNAYPAAELLALLAELAPADSAARADAAHALANIASLLPSXXXXXXXXXLLLHPLTSTPXXXXXXXPALERGGAALLRAAAAQLLSLRRCGGDAAAAWRVHAALRALAARADAPLAVAFAPPSVSAGALRSGGGGAAAGLSVRTLLGAEPSDVAGIVVRSLRPHGTKAGEENLLGGPVVAAAAAASGTGVWTAKGLESVAPGRYIAEVSIARGDGAQEETVSAPLVVTGAASVAAVRFAVNGEDVRGGRAKAGARDRLSVAFALEGDVAAPQQCSVRLRHAASGLSTYYSAQRSGGGARPGEYAATVDLSKEAAQLQHRSGDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEFEQPKPQEWPLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVRPERPSGGVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKALVGLDAPRESPQE 678          
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Match: D8LUB5_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUB5_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 1.210e-41
Identity = 214/716 (29.89%), Postives = 305/716 (42.60%), Query Frame = 0
Query:   20 PAAFGSPVRINEHLTAADLDSWRKTAQDTLQAGPELRSLSDADHALRILTNLDAGAEEFGH--IWCGAAAVGMHGGQGLSSIYHGIQVAEALGCGIPDSLSTVARDLVAQGLYGTKLEGLYYAALVSQKKGSPPLDLVKRVAVLVESSGLVAGDDTPDSLPT----QDNAYPAAELLALLAELAPADSAARADAAHALANIASLLPSXXXXXXXXXLLLHPLTSTPXXXXXXXPAL-----ERGGAALLRAAAAQLLSLRRCGGDAAAAWR---------VHAALRALAARADAPLAVAFAPPSVSAGALRSGGGGAAAGLSVRTLLGAEPSDVAGIVVRSL-RPHGTKAGEENL--LGGPVVAAAAAASGTGVWTAKGLESVAPGRYIAEVSIARGDGAQEETVSAPLVVTGAASVAAVRFAVN---------------------GEDV--RGGRAKAGARDRLSVAFALEGDVA-----------APQQCSVRLRHAASGLSTYYSAQRSGGGARPGEYAATVDLSKEAAQLQHRSGDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEFEQPKPQEWPLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVR----PERPSGGVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKALVGLDAPRE 674
            PAA  +P  + +H +AAD D++ + A   L  G    SL D D+A+R+L  LD  +   G+    C  AA G+  G  L  I+HGI +A+ +G G  ++ +  A + VA  +  + L  LY+A   +   G+   D+ +   VL +   LV  D +  S P+      N + AAELLA+L   A  D+ A                          + L  +           PAL        G   L   A++L S+ R   D   A R         V+ AL+ + +   APL +   P S S   L SGG      L   +LLG+ P+ +    + SL R  G+ A  +    LG P         G   + A     VAPG Y AE ++    G +      PL V+  A +A  R +V+                     G+D+      A AG    L V  +LEG              AP Q  V   H  +G+ T++ A   GG A   E+A +V L +E+     RSG+Y +  L       VG     G +V P  +   +G++ + F + K ++WP+Y R LLHE+DV+L  LPEKHHTFREP+ R  A + +LF ALV APLA     +RR G      P   +G  W                 YWA+LTM   L+ L  L  VT   GRKAL  L    E
Sbjct:   20 PAARAAP--LVDHFSAADGDAFVEAAVRAL--GDADSSLEDRDYAVRLLAALDKPSVASGYRSSACSVAAAGLSNGD-LEQIHHGISLADGVG-GCANAKTWRASEEVADAMKSSDLRSLYHATFAAPLLGA---DVTQGDTVLEKVLDLVGSDGSVRSYPSGPVEAGNTFMAAELLAVLVPSAKGDAKA--------------------------IALREVEVMKDKVLGAEPALVVQLSRAAGDKKLAIKASKLKSMAR---DLLEASRTSLPKSMLGVYEALKLIESYPKAPLPIKLRPSSPSVEELSSGG----VSLLATSLLGS-PAKIKSASLSSLSRADGSDASGDGDGGLGEP---------GADGFRALPSVDVAPGLYTAEFAVEVEGGEKPLVAKLPLAVSSGADLARARVSVSDSHERPLSADASIESYPLARPGKDLLPEDAHASAGEGHHLHVELSLEGXXXXXXXXXXXXXXAPHQVFVCFTHVETGMDTFFVAAPLGGEAS--EFAVSVSLGEESQTFAQRSGEYAVTAL-------VG-----GPLVAPP-ISERLGSIRLGFSEAKERKWPIYARPLLHETDVSLGPLPEKHHTFREPEVRPHAGVSLLFTALVLAPLAGLAYGMRRGGADLRRLPAAGAGRAWCAAYQACMVGVVLLFVTYWATLTMAYTLRVLAVLSVVTTVTGRKALQSLAVADE 668          
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Match: A0A7S2UXS1_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS1_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.030e-22
Identity = 84/237 (35.44%), Postives = 108/237 (45.57%), Query Frame = 0
Query:  451 PQQCSVRLRHAASGLSTYYSAQRSGGGARPGEY-----------------AATVDLSKEAAQLQHRSGDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEFEQPKPQEWPLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVR-PERPSGGVWXXXXXXXXXXXXXXXXL---YWASLTMVVALQALLPLVAVTAFVGRKAL 666
            P Q  VR  H  SG+ T++ AQ   G                        AA +++++E+   QHRSG+Y++ LLA             GD V+    EVP+G++H+     K +EWPLY R LLH+SDV L  LPE  HTFR+PD R    +  LF   V A   + +  L+R G      PSGG                  L   YW  LTM   L  LLPL  VT F G KAL
Sbjct:  182 PHQAFVRFHHVESGVDTFFVAQPLRGAGEEDXXXXXEGLDLDQTVGGSLVAAHLNVAEESESFQHRSGEYEVFLLA-------------GDGVVTEAQEVPLGSLHLTVIAEKVREWPLYSRALLHDSDVALAPLPEIQHTFRQPDARPAKVVSALFTLGVGALQLVLLGGLQRAGANLTTLPSGGASLIVAVGFQGCLGAILALFGVYWLRLTMAHCLTILLPLAIVTMFFGHKAL 405          
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Match: A0A485LDG3_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDG3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.060e-13
Identity = 77/241 (31.95%), Postives = 104/241 (43.15%), Query Frame = 0
Query:  442 FALEGDVAAP--------QQCSVRLRHAASGL-STYYSAQRSGGGARPGEYAATVDLSKEAAQLQHRSGDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEF-EQPKPQEWPLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVRPER-PSG--GVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKALVGL 669
            FA++  + AP         Q  +R  H A+ + +T+  A RS       +   TV +  E+    + SG +D+ L+              GD +    +   +GAV +     P P   PLY + LLHESDVTL ALPE  H  R P  R PA L ++F ALV APL  FV  L + G    + PSG   +W                 YW  LTM+  L  L  L  V    G +AL  L
Sbjct:  137 FAVDVSLTAPGSSMPLLAHQAFLRFTHRATNVDTTFILAPRS-----HNQLVTTVHIGSESHTFSYLSGIHDMQLI-------------FGDAMFENAIVWDIGAVDLTLGAAPIPPPLPLYTKPLLHESDVTLHALPEITHVMRPPAPRPPAALSMVFTALVLAPLVGFVFFLHQHGAALSKFPSGVGALWSIGFLASVAAILGLYVTYWVQLTMLDTLGYLGVLAPVAFLCGHQALRSL 359          
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Match: A0A1V9Y5P6_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5P6_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.120e-10
Identity = 58/187 (31.02%), Postives = 82/187 (43.85%), Query Frame = 0
Query:  484 AATVDLSKEAAQLQHRSGDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEF-EQPKPQEWPLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVRPER-PSG--GVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKAL 666
            A  V++  E+ +  + SG + + L+             +GD      +   +GAV +     P   E PLY + LLH+SDVTL ALPE  H  R  D R    +  LF  +V APL  F++ L   G +  + PSG   ++                +YW  LTM   L  L  L  VT F G +AL
Sbjct:  185 AVKVNIGAESKKFSYLSGIHTVQLI-------------LGDTTFENAIVWDLGAVELTLGAAPIEPESPLYAKPLLHDSDVTLKALPEIEHVMRAQDSRPSLAVSNLFTLVVVAPLGAFIIFLLGFGAKLSKFPSGFQAIFALGFIGSMASILALFVVYWLQLTMFATLGYLAILALVTIFFGHQAL 358          
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Match: T0PYQ3_SAPDV (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PYQ3_SAPDV)

HSP 1 Score: 68.2 bits (165), Expect = 1.700e-8
Identity = 47/119 (39.50%), Postives = 57/119 (47.90%), Query Frame = 0
Query:  551 PLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVLALRRLGVRPER-PSG--GVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKAL 666
            PLY + LLHESDVTL ALPE  H  R  D R    +  LF  +V +PL  FVL L   G +  + PSG   ++                +YW  LTM   L  L  L  VT F G +AL
Sbjct:  239 PLYAKPLLHESDVTLTALPEIEHVMRAQDSRPSLVVSNLFTLIVVSPLGGFVLFLLGFGAKLSKFPSGVQALFALGFIASMASILGLFVVYWLQLTMFATLGYLAILTVVTLFFGHQAL 357          
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Match: A0A024UNM4_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNM4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.260e-6
Identity = 54/156 (34.62%), Postives = 67/156 (42.95%), Query Frame = 0
Query:  522 IGDMVLPAGVEVPVGAVHMEFEQPKPQEWP-LYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLALFVL-ALRRLGVR--PERPSGGVWXXXXXXXXXXXXXXXXLYWASLTMVVALQALLPLVAVTAFVGRKALVGLDAPR 673
            +GD+     +E  +G V ++     P   P LY  +LLHESDVTL ALPE  H  R P  R    +  +F  LV  PL +FVL ALR   +   P    G V                 L+W  LTM   L  L  L  V    G  AL  + A R
Sbjct:  208 VGDVQFENAIEWNLGQVALDIPPAPPAPSPPLYTTSLLHESDVTLHALPEITHAMRPPAARPREVVSYVFTVLVLVPLVVFVLWALRTQSLANVPSTFGGVVVTIGFFASVLAVLGLYGLFWLQLTMFAVLTYLAVLGPVVIATGHLALHAVMAGR 363          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353415 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835Z9H4_9STRA0.000e+0100.00Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
D8LUB5_ECTSI1.210e-4129.89Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A7S2UXS1_9STRA1.030e-2235.44Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A485LDG3_9STRA2.060e-1331.95Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A1V9Y5P6_9STRA3.120e-1031.02Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
T0PYQ3_SAPDV1.700e-839.50Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A024UNM4_9STRA1.260e-634.62Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008814Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1PFAMPF05817Ribophorin_IIcoord: 382..667
e-value: 2.4E-34
score: 118.9
IPR008814Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1PANTHERPTHR12640RIBOPHORIN IIcoord: 379..668
NoneNo IPR availablePANTHERPTHR12640:SF0DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2coord: 379..668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_161contigContig_161:319961..326241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353415mRNA_13150Tribonema minus UTEX_B_3156 mRNAContig_161 319961..326408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353415|estExt_Genemark1.C_Ctg_1610061 ID=Trimin1|353415|estExt_Genemark1.C_Ctg_1610061|Name=jgi.p|Trimin1|353415|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=679bp
MVVRRAATAVLLAAAAAVPPAAFGSPVRINEHLTAADLDSWRKTAQDTLQ
AGPELRSLSDADHALRILTNLDAGAEEFGHIWCGAAAVGMHGGQGLSSIY
HGIQVAEALGCGIPDSLSTVARDLVAQGLYGTKLEGLYYAALVSQKKGSP
PLDLVKRVAVLVESSGLVAGDDTPDSLPTQDNAYPAAELLALLAELAPAD
SAARADAAHALANIASLLPSSAATAASDALLLHPLTSTPAAAAATAPALE
RGGAALLRAAAAQLLSLRRCGGDAAAAWRVHAALRALAARADAPLAVAFA
PPSVSAGALRSGGGGAAAGLSVRTLLGAEPSDVAGIVVRSLRPHGTKAGE
ENLLGGPVVAAAAAASGTGVWTAKGLESVAPGRYIAEVSIARGDGAQEET
VSAPLVVTGAASVAAVRFAVNGEDVRGGRAKAGARDRLSVAFALEGDVAA
PQQCSVRLRHAASGLSTYYSAQRSGGGARPGEYAATVDLSKEAAQLQHRS
GDYDLALLAPWAVLSVGWPMPIGDMVLPAGVEVPVGAVHMEFEQPKPQEW
PLYVRTLLHESDVTLVALPEKHHTFREPDRRAPAPLGILFAALVCAPLAL
FVLALRRLGVRPERPSGGVWGVAYQACIGAVLALFVLYWASLTMVVALQA
LLPLVAVTAFVGRKALVGLDAPRESPQE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008814Swp1