mRNA_16106 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: A0A836CK61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK61_9STRA) HSP 1 Score: 846 bits (2185), Expect = 9.980e-304 Identity = 580/580 (100.00%), Postives = 580/580 (100.00%), Query Frame = 1
Query: 1 MSVVKTIKDRQSRRALLDALNEEPRRKSLWWEQKERVLQDWLAHYPDELSVEGAVQLIESQLERGSAHPHLRFKCWKHIIIELAALLDDEGEQPVXXXXXXXXXXXXXXXXXXXXXXXXXSDSELQGDLSQLSFLKRQEVWLKRRQNSMAAKAQQVAAENEHMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHHVGSEGSDDGSLAVADQEAEPALSEHPEDEPQDALSEAGEASAAEDPEQQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRFEDSKSREQRADMAKEHEKTMASLALRRASAPVSAMTAAAVAQRHPPSSREHSPQGRRSPTAGSGGGAAQVTSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVPAMPVQQLVQAGGEG 1740
MSVVKTIKDRQSRRALLDALNEEPRRKSLWWEQKERVLQDWLAHYPDELSVEGAVQLIESQLERGSAHPHLRFKCWKHIIIELAALLDDEGEQPVXXXXXXXXXXXXXXXXXXXXXXXXXSDSELQGDLSQLSFLKRQEVWLKRRQNSMAAKAQQVAAENEHMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHHVGSEGSDDGSLAVADQEAEPALSEHPEDEPQDALSEAGEASAAEDPEQQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRFEDSKSREQRADMAKEHEKTMASLALRRASAPVSAMTAAAVAQRHPPSSREHSPQGRRSPTAGSGGGAAQVTSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVPAMPVQQLVQAGGEG
Sbjct: 1 MSVVKTIKDRQSRRALLDALNEEPRRKSLWWEQKERVLQDWLAHYPDELSVEGAVQLIESQLERGSAHPHLRFKCWKHIIIELAALLDDEGEQPVXXXXXXXXXXXXXXXXXXXXXXXXXSDSELQGDLSQLSFLKRQEVWLKRRQNSMAAKAQQVAAENEHMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHHVGSEGSDDGSLAVADQEAEPALSEHPEDEPQDALSEAGEASAAEDPEQQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRFEDSKSREQRADMAKEHEKTMASLALRRASAPVSAMTAAAVAQRHPPSSREHSPQGRRSPTAGSGGGAAQVTSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVPAMPVQQLVQAGGEG 580
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: D7FPL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL4_ECTSI) HSP 1 Score: 182 bits (461), Expect = 1.490e-47 Identity = 148/361 (41.00%), Postives = 194/361 (53.74%), Query Frame = 1
Query: 364 DSELQG--DLSQLSFLKRQEVWLKRRQNSMAAKAQQV--AAENEHMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHH--------VGSEGSDDG-----SLAVADQ------EAEPALSEHPEDEPQDALSEAGEASAAEDPE------------QQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRFEDSKSREQRADMAKEHEKTMASL--ALRRASAPVSA 1335
D+++ G DLS LSF++RQE WL+R+Q ++ AK +V AA+N TF+PN+ SQ S++ AQ+SA+E K+E MA +AER RR+S + +E + R P T T A ST + RR TAP+ Q G SDDG S + D+ E E D D+ E GE E ++PPF GSF+ K DD+ +GHYRVRD F LTSMYKRKDRVTRT GVSLLVG++E PPHEE+V+SA+FD DRFTE AA WW NGHRFED++S + ++ + ++TM LRRASAP A
Sbjct: 26 DNDVDGMVDLSGLSFVERQEEWLRRKQTALRAKTHEVERAAKNA-ATFNPNLAISQSSLRPAQVSAVEMKLEQMANEAERHARRSSF-----------SQSIQEAKRRAEREALPPPTIT-AGGRRRSRMKRRGSTDEDVAHARRATAPSGVFQARDDAIGLLNPAGDGQSDDGLDESGSNSNHDRSMGGVGEGPGVDGEEAGDGAIDSNLEGGENEGEEXXXXXXXXXXXXXXXREPPFEKGSFFFKVDDKDKGHYRVRDVSCFLLTSMYKRKDRVTRTPGVSLLVGKLEDPPHEEKVISALFDTDRFTERAAAQWWEDNGHRFEDARSLAAKKELDDDRKRTMERNIEVLRRASAPARA 373
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: A0A7S3XYA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYA5_HETAK) HSP 1 Score: 118 bits (295), Expect = 2.940e-27 Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 961 EQQPP------------FVAGSFYTKCDDRGR-GHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRFED 1239
E+QPP ++ G F+TK D R GH+++R+P FQLTSMYKRKDRVTR +G+SLLVG++E+PPH+E+V+S ++D D F E A AWW+ N HRF+D
Sbjct: 35 EEQPPEPIEVKAPNPDEYIPGKFFTKIDGSARKGHFKIREPEHFQLTSMYKRKDRVTRQIGLSLLVGKLEKPPHQEKVISFLYDLDEFDERGAHAWWVANRHRFQD 140
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: A0A7S2RVV6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.570e-17 Identity = 44/90 (48.89%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 964 QQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRF 1233
+ P FV G F+ K + GRGH+RVRD G FQ+ S+Y++KD+ GVS+LVGR EQPP+EE+V+ ++D + ++EE A WW N HR+
Sbjct: 509 EAPEFVPGQFWWKVES-GRGHHRVRDGGEFQMWSIYRKKDKTRDVSGVSMLVGRTEQPPYEEKVIQMMWDTEAWSEEAAFKWWHENKHRY 597
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: W4FG78_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FG78_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 7.720e-15 Identity = 105/410 (25.61%), Postives = 172/410 (41.95%), Query Frame = 1
Query: 82 SLWWEQKERVLQDWLAHYPDELSV--EGAVQLIESQLERGSAHPHLRFKCWKHIIIELAALLDDEGEQPVXXXXXXXXXXXXXXXXXXXXXXXXXSDSELQGDLSQLSFLKRQEVWLKRRQNSMAAKAQQVAAENEHMTFSPNVQQSQG------SMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLG------PAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHHVGSEGSDDGSLAV-----ADQEAEPALSEHP---EDEPQ-DALSEAGE-------ASAAEDPEQQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLN 1221
SLWWE + +V+Q+WL P + V +G ++ I Q+ RG H H+R K W HI+ EL + + + + D QL+F +EV R A K + E+ +T N Q+ Q +QMS M+++ E + AE+ + E +R++D+ + + T S R L P+ TP K+P G ++ V +E S + A +++ P L+ HP ED D +++A E A+ PE++PPF + + Y+++DP F LTS+Y++KD+ R GVSL +GR + EEQ+++ +FD + FT E A W +
Sbjct: 30 SLWWESRIKVVQEWLRANPLRIGVPDDGTIETITQQIARGDQHSHIRVKAWNHIVAELHGIPGVCTKFTGTLAATLAGPVEVEPGDDQPCNNEGDALASQDSDDRQLTFNATEEVLSPLRGKLRATKGKAPVVESVTVTSILNQQEEQKHPHMLEKKSLSQMSMMDRQQEWLRKKAEKT----AAEKQRQQDEADKELTFQPTLKKSTRSLTQTAVPQPSTTPAPLEPTKQPRSKSADRHRKQP-GTQKLPLKTTSSLLDSVKAELSASSAATPMPPTKATKQSAP-LTCHPTTVEDSTNVDLIAKALESLGTIIKATNESPPEKEPPFQ----FDPRSSETKARYQLQDPAQFDLTSVYRKKDKYARHDGVSLQMGRRDDT-REEQIIAVLFDREHFTSEAEAGEWFAD 428
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: A0A1V9YWI2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWI2_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.310e-11 Identity = 98/437 (22.43%), Postives = 168/437 (38.44%), Query Frame = 1
Query: 88 WWEQKERVLQDWLAHYPDELSV--EGAVQLIESQLERGSAHPHLRFKCWKHIIIELAAL-------------------------LDDEGEQ---------------------PVXXXXXXXXXXXXXXXXXXXXXXXXXSDS------ELQGDLSQLSFLKRQEVWLKRRQNSMAA-KAQQVAAENEHMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERR---RDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHHVGSEGSDDGSLAVADQEAEPALSEHPEDEPQDALSEAGEASAAEDPEQQP--PFVAGSFYTKCDDR-GRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRF-TEETAAAWW 1212
WWE + RV+QDWL P + + +G ++ I Q+ RG H+R K W HI+ EL + LDD+ + P+ D E + ++Q+S ++RQE WL+++ AA KA+Q+ + +TF P++ + + K ++ ++ R S R+ +DK + P+ T+S S +L A+ + M KP +P + + D ++A AL + + A P P P F+ + ++++DP LF LTS+Y++KD+ R GVSL +GR + HEEQ+++ +FD D+F +E+ A AW+
Sbjct: 35 WWEARVRVVQDWLRANPLHIGLPEDGTIETITQQIARGDKFVHVRVKAWNHIVAELQGIPGVCEKFATVETSPELPPQPEAPPGLDDDTDHNEDPASTPGSAESMEAEPPMYPISPFRGKLHPAKAKSLHDSSTMDVSNQDPVPHDKPEPRKSIAQMSMMERQEEWLRKKAEKAAAEKARQLEEAEKELTFQPSLVKKPST----------KPVDDGGQSPRKLQRSKSAGRTRKPLNKDKSAAGLKPKATSSRS--LLDSVKADLAASVQKKTD-----APMPKPH------------RPDELPPTATADATIAYVAA----------------ALENINKTTLAPPPSVAPAVPSTERPFHFDAGSTDAKARFQLQDPALFDLTSIYRKKDKYARAEGVSLQMGRRDDT-HEEQLIAVMFDRDKFPSEDIARAWY 425
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: T0RDG5_SAPDV (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0RDG5_SAPDV) HSP 1 Score: 73.2 bits (178), Expect = 5.520e-10 Identity = 101/452 (22.35%), Postives = 170/452 (37.61%), Query Frame = 1
Query: 88 WWEQKERVLQDWLAHYPDELSV--EGAVQLIESQLERGSAHPHLRFKCWKHIIIELAAL----------------------LDDEGE-----------------QPVXXXXXXXXXXXXXXXXXXXXXXXXXSDSELQGDLS--------------------QLSFLKRQEVWLKRRQNSMAAKAQQVAAENE-HMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHHVGSEGSDDGSLAVADQEAEPALSEHPEDEPQDALSEAGEASAAEDPEQQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRFEDSKSREQ 1257
WWE + RV+Q+WL P + + +G ++ I QL RG + H+R K W HI+ EL + +DDE E +P + D+S Q+S ++RQE WL+++ AA+ Q+ E E +TF P++ + + ++ K A A R + +++ +DK V + P ++ S +L + A+ S + K T+ L + ++ + A D + L A +D + V S + +G ++++DP LF LTS+Y++KD+ R GV L +GR + HEEQ+++ +FD D+FT E A W F D K+R Q
Sbjct: 30 WWEARARVVQEWLRANPLRIGLPDDGTIETITQQLTRGDKYIHVRVKAWNHIVTELQGIPGVCEKFATFETSPELPMATVVVDDEDEDEQASHTSSPLSDTTTDEPAPIDGVVPLHPASPFRGKLHPTKAKSLHEPAKDDVSVLAPATNQTDKADAPRKSIAQMSMMERQEEWLRKKAEKAAAEKQRQLDEAEKELTFQPSLVKKPKAPDTDGANSPRKLQR--AKSAGRARKSSALS----KDKSIVLLKPGAKSATSKSLLDSVKSELAAST----------SMLVKTGATTATTSTKLDVAAVTERTDATIAYVAAALDTINKTTL--------------APSIGVVKDAPKSNVDVRVSQFDAESSDVKGRFQLQDPALFDLTSIYRKKDKYARVDGVCLQMGRRDDT-HEEQLIAVLFDRDKFTTEATAQTW------FNDHKARLQ 444
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: A0A5D6XRB8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRB8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.800e-9 Identity = 96/457 (21.01%), Postives = 163/457 (35.67%), Query Frame = 1
Query: 52 DALNEEPRRKSLWWEQKERVLQDWLAHYPDELSV--EGAVQLIESQLERGSAHPHLRFKCWKHIIIELA------------------------------------ALLDDEGEQ----------PVXXXXXXXXXXXXXXXXXXXXXXXXXSDSELQGDLSQLSFLKRQEVWLKRRQNSMAA-KAQQVAAENEHMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLG-------MQPHHVGSEGSDDGSLAVADQEAEPALSEHPEDEPQDALSEAGEASAAEDPEQQP-------PFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRF 1233
DAL EP WW + ++++ WL + V +G+ ++I ++RG +PH++FKCWKHI++EL L DD+ Q P+ S + S LS +RQ WL+++Q M A +++Q +++ +TF P +++RR+++ P ++T + P AG + K G + P + +P V + S + D A E DE A ++ ED Q P P + G + ++D F+L+SMY++ D+ R GV+L +GR E EE+V++ +FD ++ +E A WW + HRF
Sbjct: 10 DALTLEP---GNWWHTRVKLVEKWLGEEANRAEVPDDGSEEMIRRHMQRGDIYPHVQFKCWKHILLELQDIPTFVDRFADSTRAASAPANVSPSRGKIRPGKELIILSDDDANQEITGGESDEPPLSSDSALHEPPSDSAERQVATIANVPSATNAAKKFSALSMAERQAEWLRKKQEKMEAERSRQEEEKDKELTFQP-----------------------------KILRRSTL----------GEKPTKDTPAPKPLQRSDAGAGGSLRKIDIAGSSEQQQQAKARAGPKERAIPRVPPRSASRRKKPLQVSPSQPIEISSDLLDSTNNNAALEQSLDEDDSA----DDSEFLEDRLQVPLKSWSDQPTIGGRRVGFDSSETKARLVLQDASKFELSSMYRKTDKKARRDGVALHMGRREDTL-EEEVIAVLFDKEKVSELEAERWWHEHEHRF 419
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: A0A7S4MCV8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCV8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.990e-8 Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 1006 DDRGRGHYRVRDPGLFQLTSMYKRKDRVT-RTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLNGHRFEDSK 1245
++ R R+RD LF+ +++YK++DR + R V++++GR + PPH+E+ + FD D +E A WW N +RFE +
Sbjct: 376 EESNRKSIRIRDMSLFKPSTIYKKRDRRSGRGSSVAIVIGRYQLPPHQEKTIEVCFDMDELSEAEAVEWWRKNNYRFESPR 456
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Match: A0A418D423_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418D423_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.160e-8 Identity = 88/389 (22.62%), Postives = 163/389 (41.90%), Query Frame = 1
Query: 82 SLWWEQKERVLQDWLAHYPDELSV--EGAVQLIESQLERGSAHPHLRFKCWKHIIIELAALLDDEGEQPVXXXXXXXXXXXXXXXXXXXXXXXXXSDSEL------QGDLSQLSFLKRQEVWLKRRQNSMAAKAQQVAAE-NEHMTFSPNVQQSQGSMKAAQMSAMEKKMEMMAMDAERVVRRNSMELERRRDKGPVNVPPRETTSLSPRMLGPAGTPTNAAAXXXXXXXXXXSTMKKPKGNRRCTAPNLGMQPHHVGSEGSDDGSLAVADQEAEPALSEHPEDEPQDALSEAGEASAAEDPEQQPPFVAGSFYTKCDDRGRGHYRVRDPGLFQLTSMYKRKDRVTRTLGVSLLVGRIEQPPHEEQVVSAIFDGDRFTEETAAAWWLLN 1221
SLWWE + +V+Q+WL P + V +G ++ ++ + ++H +LA +E P+ + + + LSQ+S + RQ+ WL+++ AA+ Q+ E ++ +TF P +++S S+ Q + + ++ + R S + R++ G +P + T+SL + A ++AA T P + +AP V S D + A+ ++L +A+ PE++PPF + + Y+++DP F LTS+Y++KD+ R GVSL +GR + EEQ+++ +FD + FT E A W +
Sbjct: 46 SLWWESRIKVVQEWLRANPLRIGVPDDGTIEPCNNEGDALASHDSDER--------QLALNATEEVSSPLRGKLRATKCKAPVVESVTVASILNQQEEQKHPHMLEKKSLSQMSMMDRQQEWLRKKAEKTAAEKQRQQDEADKELTFQPTLKKSTRSL--TQTAVPQPSTTPAPLEPAKQPRSKSADRHRKQS-GTQKLPLKTTSSLLDSVK--AELSASSAA-----------TPMPPTTVTKQSAPLTCHPTTAVDSTNVDLIAKAL------------------ESLGTIIKATNESPPEKEPPFQ----FDPRSSETKARYQLQDPAQFDLTSVYRKKDKYARHDGVSLQMGRRDDT-REEQIIAVLFDREHFTSEAEAGEWFAD 387 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353387 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16106 ID=mRNA_16106|Name=jgi.p|Trimin1|353387|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1916bp|location=Sequence derived from alignment at Contig_160:145456..154359- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGGTGGTCAAAACCATCAAGGACAGACAAAGCAGACGAGCGCTGCTback to top protein sequence of jgi.p|Trimin1|353387 >Trimin1|353387|estExt_Genemark1.C_Ctg_1600017 ID=Trimin1|353387|estExt_Genemark1.C_Ctg_1600017|Name=jgi.p|Trimin1|353387|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=581bp MSVVKTIKDRQSRRALLDALNEEPRRKSLWWEQKERVLQDWLAHYPDELSback to top mRNA from alignment at Contig_160:145456..154359- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16106 ID=mRNA_16106|Name=jgi.p|Trimin1|353387|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8904bp|location=Sequence derived from alignment at Contig_160:145456..154359- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_160:145456..154359- >mRNA_16106 ID=mRNA_16106|Name=jgi.p|Trimin1|353387|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1743bp|location=Sequence derived from alignment at Contig_160:145456..154359- (Tribonema minus UTEX_B_3156 )back to top |