Trimin1|353382|estExt_Genemark1.C_Ctg_1600006 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353382
Unique NameTrimin1|353382|estExt_Genemark1.C_Ctg_1600006
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length268
Homology
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: A0A836CJ15_9STRA (Natural killer enhancing factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ15_9STRA)

HSP 1 Score: 491 bits (1265), Expect = 5.630e-175
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query:    1 MATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFAGVEEAPAAXXXXXXXXXXXKKGAKAAPAKPEKXXXXXXAAADAKEPGRKKRKA 267
            MATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFAGVEEAPAAXXXXXXXXXXXKKGAKAAPAKPEKXXXXXXAAADAKEPGRKKRKA
Sbjct:    1 MATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFAGVEEAPAAXXXXXXXXXXXKKGAKAAPAKPEKXXXXXXAAADAKEPGRKKRKA 267          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: O93241_CYPCA (Natural killer cell enhancing factor n=4 Tax=Cyprinoidei TaxID=30727 RepID=O93241_CYPCA)

HSP 1 Score: 266 bits (679), Expect = 7.960e-87
Identity = 127/213 (59.62%), Postives = 160/213 (75.12%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFA 214
            A +GK APDFTA A+MPD  FK              +SL +YKGKY+VLFF+PLD TFVCPTEII FS+A EEF+K++CE++G S DS +CHL+W+  PRK+GG+G +N+P++AD          +  +SQDYGVL E EGIA RGLFII DKG++R ITINDLPVGR+ +E LRLVQAFQ+TDKHGEVCPAGWKPG+ ++K D   SK+YF+
Sbjct:    6 AHIGKPAPDFTAKAVMPDGQFKD-------------LSLSEYKGKYVVLFFYPLDFTFVCPTEIIAFSDAVEEFRKINCEVIGASVDSHFCHLAWINTPRKQGGLGHMNVPLVADS---------LRSISQDYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVQQSKDYFS 196          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: A0A8B9LKW5_ASTMX (Peroxiredoxin-1 n=3 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9LKW5_ASTMX)

HSP 1 Score: 261 bits (668), Expect = 2.750e-84
Identity = 125/213 (58.69%), Postives = 157/213 (73.71%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFA 214
            A +G  APDFTA A+MPD  FK              + L DY+GKY+VLFF+PLD TFVCPTEII FS+A EEF+K+DCE++G S DS +CHL+W+  PRK+GG+G +N+P++AD          +  +S+DYGVL E EGIA RGLFII DKG +R ITINDLPVGR+ +E LRLVQAFQYTDKHGEVCPAGWKPG+ ++K D   SK++F+
Sbjct:   66 AKIGHLAPDFTAKAVMPDGQFKD-------------LKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDAAEEFRKIDCEVIGASVDSHFCHLAWINTPRKQGGLGHMNVPLVADT---------LRTISRDYGVLKEDEGIAFRGLFIIDDKGTLRQITINDLPVGRSIDETLRLVQAFQYTDKHGEVCPAGWKPGKDTIKPDVQKSKDFFS 256          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: A0A0E9X1E4_ANGAN (Thioredoxin domain-containing protein n=2 Tax=Teleostei TaxID=32443 RepID=A0A0E9X1E4_ANGAN)

HSP 1 Score: 259 bits (662), Expect = 2.930e-84
Identity = 122/213 (57.28%), Postives = 156/213 (73.24%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFA 214
            A +GK APDF A A+MPD  FK+             + + DY+GKY+V FF+P+D TFVCPTEII FS+A EEF+K+DCE++G S DS +CHL+W+ KPRK+GG+G + +P++AD    +SKA         YGVL E EG++ RGLFII DKG++R ITINDLPVGR+ EE LRLVQAFQ+TDKHGEVCPAGWKPG  ++K D   SKE+F+
Sbjct:    6 ARIGKLAPDFKATAVMPDGQFKE-------------LKISDYRGKYVVFFFYPMDFTFVCPTEIIAFSDAAEEFRKIDCEVIGASVDSHFCHLAWINKPRKQGGLGPMKIPLVADALHSISKA---------YGVLKEDEGLSYRGLFIIDDKGILRQITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEFFS 196          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: W5MFV2_LEPOC (Peroxiredoxin-1 n=37 Tax=Actinopteri TaxID=186623 RepID=W5MFV2_LEPOC)

HSP 1 Score: 259 bits (662), Expect = 3.590e-84
Identity = 123/213 (57.75%), Postives = 155/213 (72.77%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFA 214
            A +GK APDF A A+MPD  FK+             + L DY+GKY+V FF+PLD TFVCPTEII FS++ EEFKK++CE++G S DS +CHL+W+  PRK+GG+G + +P++AD    +SK         DYGVL E EGIA RGLFII DKG++R ITINDLPVGR+ +E LRLVQAFQ+TDKHGEVCPAGWKPG  ++K D   SK++FA
Sbjct:   11 ARIGKPAPDFQATAVMPDGQFKE-------------IKLSDYRGKYVVFFFYPLDFTFVCPTEIIAFSDSAEEFKKINCEVIGASVDSHFCHLAWINTPRKQGGLGHMKIPLVADTLRSISK---------DYGVLKEDEGIAFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKDFFA 201          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: Q5BJJ3_DANRE (Zgc:110343 n=11 Tax=Clupeocephala TaxID=186625 RepID=Q5BJJ3_DANRE)

HSP 1 Score: 259 bits (661), Expect = 4.300e-84
Identity = 125/213 (58.69%), Postives = 156/213 (73.24%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFA 214
            A +GK APDFTA A+MPD  F               V L DYKGKY+VLFF+PLD TFVCPTEII FS+A E F+K++CE++G S DS +CHL+W + PRK+GG+G +N+P++AD    +SK         DYGVL E EGIA RGLFII DKG++R ITINDLPVGR+ +E LRLVQAFQ+TDKHGEVCPAGWKPG+ ++K D   SK++F+
Sbjct:    6 AHIGKPAPDFTAKAVMPDGQFGD-------------VRLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDAAEGFRKINCEIIGASVDSHFCHLAWTKTPRKQGGLGPMNVPLVADTLRSISK---------DYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVNQSKDFFS 196          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: A0A8C9TI16_SCLFO (Peroxiredoxin-1 n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TI16_SCLFO)

HSP 1 Score: 258 bits (660), Expect = 6.750e-84
Identity = 122/217 (56.22%), Postives = 157/217 (72.35%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFAGVEE 218
            A +GK APDF A A+MPD  FK              + L DY+GKY+V FF+P+D TFVCPTEII FS+A EEFKK+DCE++G S DS +CH +W++ PRK+GG+G +N+P++AD+         +  +SQDYGVL E EGIA RGLFII DKG++R ITINDLPVGR+ EE LRLVQAFQ+TD++GEVCPAGWKPG  ++K D   SK++F    +
Sbjct:    6 AHIGKLAPDFKAKAVMPDGQFKD-------------IKLSDYRGKYVVFFFYPMDFTFVCPTEIIAFSDAVEEFKKIDCEIIGASVDSHFCHHAWIKTPRKQGGLGHMNIPLVADK---------LQTISQDYGVLKEDEGIAYRGLFIIDDKGILRQITINDLPVGRSVEETLRLVQAFQFTDQYGEVCPAGWKPGSDTIKPDVQKSKDFFTAFPQ 200          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: A0A0P4VTT4_SCYOL (Thioredoxin domain-containing protein n=5 Tax=Heterotremata TaxID=116706 RepID=A0A0P4VTT4_SCYOL)

HSP 1 Score: 258 bits (659), Expect = 8.370e-84
Identity = 121/179 (67.60%), Postives = 143/179 (79.89%), Query Frame = 0
Query:   38 VSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFAGV 216
            +SLKDYKGKYLVLFF+PLD TFVCPTEII FSE  EEF K+ CE+V CSTDS + HL+WV  PRKEGG+G +N+P+LAD+++++SKA         YGVL +  G++ RGLFII DK  +R ITINDLPVGR+ +E LRLVQAFQ+ DKHGEVCPAGWKPG KSMKADP GSKEYF  V
Sbjct:   28 ISLKDYKGKYLVLFFYPLDFTFVCPTEIIAFSERAEEFHKIGCEVVACSTDSHFSHLAWVNTPRKEGGLGQMNIPLLADKSMEISKA---------YGVLKDDAGLSFRGLFIIDDKQNLRQITINDLPVGRDVDETLRLVQAFQFVDKHGEVCPAGWKPGSKSMKADPVGSKEYFKAV 197          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: A0A8C4S592_ERPCA (Peroxiredoxin-1 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S592_ERPCA)

HSP 1 Score: 258 bits (658), Expect = 1.190e-83
Identity = 121/213 (56.81%), Postives = 155/213 (72.77%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFA 214
            A +GK AP+F A A+MPDK FK              + L DY+GKY+V FF+PLD TFVCPTEII FS+  +EFKK++CE++G S DS +CHL+W+  PRK+GG+G +N+P++AD    ++K         DYGVL E EGIA RGLFI+ DKG++R ITINDLPVGR+ +E LRLVQAFQ+TDKHGEVCPAGWKPG  ++K D   SKE+F+
Sbjct:    6 AHIGKPAPNFKATAVMPDKQFKD-------------IQLSDYRGKYVVFFFYPLDFTFVCPTEIIAFSDRADEFKKINCEVIGASVDSHFCHLAWINTPRKQGGLGQMNIPLVADTLRTIAK---------DYGVLKEDEGIAFRGLFIVDDKGILRQITINDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVKQSKEFFS 196          
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Match: A0A7N4PB00_SARHA (Peroxiredoxin-1 n=3 Tax=Metatheria TaxID=9263 RepID=A0A7N4PB00_SARHA)

HSP 1 Score: 258 bits (658), Expect = 2.840e-83
Identity = 124/213 (58.22%), Postives = 156/213 (73.24%), Query Frame = 0
Query:    2 ATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVLFFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKPRKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFIISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEKSMKADPTGSKEYFA 214
            A +G  AP+F A A+MPD+ FK              +SL DYKGKY+VLFF+PLD TFVCPTEII FS+  EEFKK++C+++G S DS +CHL+WV   +KEGG+GAVN+P+L+D    ++         QDYG+L   EGI+ RGLFII DKG++R ITINDLPVGR+ +E LRLVQAFQ+TDKHGEVCPAGWKPG  ++K D  GSKEYF+
Sbjct:   31 AKIGFPAPNFKATAVMPDQQFKD-------------ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTGKKEGGLGAVNIPLLSDPKRTIA---------QDYGILKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVRGSKEYFS 221          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353382 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ15_9STRA5.630e-175100.00Natural killer enhancing factor n=1 Tax=Tribonema ... [more]
O93241_CYPCA7.960e-8759.62Natural killer cell enhancing factor n=4 Tax=Cypri... [more]
A0A8B9LKW5_ASTMX2.750e-8458.69Peroxiredoxin-1 n=3 Tax=Astyanax mexicanus TaxID=7... [more]
A0A0E9X1E4_ANGAN2.930e-8457.28Thioredoxin domain-containing protein n=2 Tax=Tele... [more]
W5MFV2_LEPOC3.590e-8457.75Peroxiredoxin-1 n=37 Tax=Actinopteri TaxID=186623 ... [more]
Q5BJJ3_DANRE4.300e-8458.69Zgc:110343 n=11 Tax=Clupeocephala TaxID=186625 Rep... [more]
A0A8C9TI16_SCLFO6.750e-8456.22Peroxiredoxin-1 n=2 Tax=Scleropages formosus TaxID... [more]
A0A0P4VTT4_SCYOL8.370e-8467.60Thioredoxin domain-containing protein n=5 Tax=Hete... [more]
A0A8C4S592_ERPCA1.190e-8356.81Peroxiredoxin-1 n=2 Tax=Polypteridae TaxID=8289 Re... [more]
A0A7N4PB00_SARHA2.840e-8358.22Peroxiredoxin-1 n=3 Tax=Metatheria TaxID=9263 RepI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019479Peroxiredoxin, C-terminalPFAMPF104171-cysPrx_Ccoord: 180..215
e-value: 8.4E-15
score: 54.3
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..218
e-value: 4.5E-76
score: 256.5
NoneNo IPR availablePIRSRPIRSR000239-1PIRSR000239-1coord: 25..214
e-value: 4.4E-66
score: 219.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..267
NoneNo IPR availablePANTHERPTHR10681:SF154THIOREDOXIN-LIKE FOLDcoord: 4..232
NoneNo IPR availablePANTHERPTHR10681THIOREDOXIN PEROXIDASEcoord: 4..232
NoneNo IPR availableCDDcd03015PRX_Typ2cyscoord: 4..198
e-value: 8.51967E-106
score: 302.116
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 4..159
e-value: 4.8E-32
score: 110.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 2..183
score: 16.783997
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 1..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_160contigContig_160:24865..30600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353382mRNA_16092Tribonema minus UTEX_B_3156 mRNAContig_160 24579..30600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353382|estExt_Genemark1.C_Ctg_1600006 ID=Trimin1|353382|estExt_Genemark1.C_Ctg_1600006|Name=jgi.p|Trimin1|353382|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=268bp
MATVGKAAPDFTADALMPDKTFKKASDQFDQDAQNVLVSLKDYKGKYLVL
FFWPLDHTFVCPTEIIQFSEAYEEFKKVDCELVGCSTDSEYCHLSWVEKP
RKEGGIGAVNMPILADRALKVSKADRVLKVSQDYGVLIEGEGIALRGLFI
ISDKGVVRHITINDLPVGRNAEEALRLVQAFQYTDKHGEVCPAGWKPGEK
SMKADPTGSKEYFAGVEEAPAAAAAPPAAAAAAKKGAKAAPAKPEKAAEP
AEAAADAKEPGRKKRKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019479Peroxiredoxin_C
IPR000866AhpC/TSA
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf