Trimin1|347793|estExt_Genemark1.C_Ctg_160031 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347793
Unique NameTrimin1|347793|estExt_Genemark1.C_Ctg_160031
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length732
Homology
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: A0A836CJJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ1_9STRA)

HSP 1 Score: 1105 bits (2859), Expect = 0.000e+0
Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 0
Query:    1 MAPQCKGWAPQQRASAAXXXXXXXXXXXXXXSLACSSCGHRAAAHPLQPGAPPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQGVASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLXXXXXXXXXXXXXXXXXXXPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA 731
            MAPQCKGWAPQQRASAAXXXXXXXXXXXXXXSLACSSCGHRAAAHPLQPGAPPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQGVASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLXXXXXXXXXXXXXXXXXXXPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA
Sbjct:    1 MAPQCKGWAPQQRASAAXXXXXXXXXXXXXXSLACSSCGHRAAAHPLQPGAPPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQGVASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLXXXXXXXXXXXXXXXXXXXPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA 731          
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: D7FW07_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW07_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.190e-32
Identity = 202/649 (31.12%), Postives = 243/649 (37.44%), Query Frame = 0
Query:  174 GLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHL------------KATMDL---DLQGGGK-------------GKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAA-----------------------------------------LRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXS--------------CAVC--KATGQG---LRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAV-----GGSGGAPFNDKKRFAPLS 729
            G  +A+ELD  YWH RY A +  DA   +             A T S +  +VPPPEVYF  L+ H+ +V + R +       A   +L  +             AT  L      GGG+              ++ WLE  V A    W    P      EGTMRGSDP LP  +R RCD+ RDW+ARL AFAVPN  AL    R   A   GG              S  +VEVGAGLGYWKW                                            +  P + + A DKDP  +PG              XXXXXXXXXXXXXXXXXX   GR        RGG +R                       E       HGG  A+     GG   L  +                    ++  P P       A     ADAL  F+G  ++Y GE GGDTG+P  EAAL A W      VELP F +TA  LMVF R                 +G  R  A A AA                            C+ C  KA  +G   L RCR TR+  +CSE C   D  R +     RHV    G AV      G  G  F DKK F  L+
Sbjct:   49 GTGIASELDLAYWHARYTAASRFDAGGVA-------------ADTESSSHQVVPPPEVYFVGLAFHVPAVTEVRASAVLDNNPALRRVLVDVFDLPVGDAGAQRHATRSLPPSSSSGGGEIRFPVLENPLLAVAQSAWLETAVCASAKSWVPHFPPRFGDNEGTMRGSDPGLPPPIRLRCDATRDWSARLFAFAVPNRRALDACKRALDACGVGGXXXXXX-------XSGGIVEVGAGLGYWKWVLEGLGPFPNGRGXXXXXXXXXXTSRGVSLHLGKAGRTLSGGDAKEAPPLKFLAIDKDPSRVPGGTG------VSAASXXXXXXXXXXXXXXXXXXXXXGR--------RGGNKRTRREGSRGGRHGEGQS-------ERPTHNEYHGGAPAWAVVEQGGPEQLRALSAAAYPVL------------LLCYPPPSVGVGTGASGCMGADALARFSGKVLLYIGEVGGDTGSPRFEAALRAGW-DLVEEVELPCFSSTANRLMVFARKGAFSSGGGVSASTAG-SGKKRKDAGAAAARLDTPGKDACPTGDAGGXXXXXGMAMYRCSGCGAKAAAEGGVLLHRCRLTRSVSFCSEKCLTLDAERWRANLEARHVHLAPGTAVELANQSGKFGGVFRDKKLFKRLA 642          
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: A0A0L0G853_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G853_9EUKA)

HSP 1 Score: 126 bits (316), Expect = 2.420e-26
Identity = 108/353 (30.59%), Postives = 139/353 (39.38%), Query Frame = 0
Query:  174 GLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLD--------------------LQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPY-EGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKW-------AALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXX-----LFLCYPPPEGTMGI 493
            G+ +AAELD VYWH+ Y+A T      G S                     ++PPPEVYFTCL+ H     +    +  +       + + L  TMD+                     LQG      TW+EME+ A    W G  PL  SP  E TMRG DPLLP  +  RCDS+RDW+ARLMAFAVPN  A  V+++                          +VEVGAG+GYWK        +      R  Y A+DKDPP                                    EYHG + AW+ V+ GG E                     +  CYPPP G + +
Sbjct:  274 GVYVAAELDNVYWHILYSAQTNFHLLQGRSRLPA-----------------VIPPPEVYFTCLT-HTPPTKEMMETISIT-----PSIRKTLFDTMDMKFDAVTGEPAYCNTSNPLLAALQG------TWIEMEICAQSRSWVGNFPLQDSPNAEKTMRGPDPLLPQPISLRCDSVRDWSARLMAFAVPNTRAYDVLSKF-----------------------GTIVEVGAGVGYWKHYFDTSMASTQNDGTRTEYLAFDKDPP---------------SSAVDSQTRSKVPAAAKSTMNEYHGHSGAWATVQVGGPESISLSSQTKAVDTGAQSKNIAVLSCYPPPYGNLAL 559          
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: A0A7S3HGH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGH7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.030e-6
Identity = 38/103 (36.89%), Postives = 48/103 (46.60%), Query Frame = 0
Query:  309 TMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRM--SYTAYDKDPP 409
            TM+G+DPLLP ++R   D  R W   L +FA P   AL  +A +                       A LVE+GAG GYW    +R +     S  AYDKDPP
Sbjct:   44 TMKGTDPLLPAVLRQWNDGCRIWPCHLYSFATPTVPALETLASL-----------------------APLVEIGAGTGYWAHM-VRTFTSTPESIIAYDKDPP 122          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CJJ1_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FW07_ECTSI1.190e-3231.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0L0G853_9EUKA2.420e-2630.59Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S3HGH7_9STRA7.030e-636.89Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR39290FAMILY NOT NAMEDcoord: 318..617
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..35
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:228874..237824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347793mRNA_2943Tribonema minus UTEX_B_3156 mRNAContig_16 228874..237946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347793|estExt_Genemark1.C_Ctg_160031 ID=Trimin1|347793|estExt_Genemark1.C_Ctg_160031|Name=jgi.p|Trimin1|347793|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=732bp
MAPQCKGWAPQQRASAAARGGSGSTSSSGGSSLACSSCGHRAAAHPLQPG
APPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQG
VASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLPPLLLLRRQRRLLL
LLLLLPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASA
GSSGSGSGGGGSGGGATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRAL
QASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLP
LTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIA
RVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMS
YTAYDKDPPPLPGARAPPPGSQGGGSSRKGKGKKQQNASAAAGGNEYHGR
APAWSAVERGGTERAGAAAAPSQQQQRSVLFLCYPPPEGTMGIAPHGGCC
AYRDRGAGGKRFLSTVPPPCRAAAAAAAAAAAALAAIVKSPTPPRSHPVR
APTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVEL
PAFPNTAACLMVFRRRRGGSGGSGGGGGGGGGAGVVRAFAAAPAAGGKGA
GGGAGALSSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLV
RHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA*
back to top