Trimin1|347783|estExt_Genemark1.C_Ctg_160015 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: A0A836CM55_9STRA (Ribosome recycling factor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM55_9STRA) HSP 1 Score: 620 bits (1599), Expect = 1.330e-223 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 MRASAARAVATRLRHVSGLAGRALAADAAAATHLNSKGFTTVAAVSAAPHLPATRIVDRKHRMGFAMEPQQPALLLVRRFKHGSLGKKGKKAGKTSRAELYNARPAAAAESIPLDDESSVSDAEPEESEEEEPADQDYATVDDCAPLDALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILSA 335
MRASAARAVATRLRHVSGLAGRALAADAAAATHLNSKGFTTVAAVSAAPHLPATRIVDRKHRMGFAMEPQQPALLLVRRFKHGSLGKKGKKAGKTSRAELYNARPAAAAESIPLDDESSVSDAEPEESEEEEPADQDYATVDDCAPLDALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILSA
Sbjct: 1 MRASAARAVATRLRHVSGLAGRALAADAAAATHLNSKGFTTVAAVSAAPHLPATRIVDRKHRMGFAMEPQQPALLLVRRFKHGSLGKKGKKAGKTSRAELYNARPAAAAESIPLDDESSVSDAEPEESEEEEPADQDYATVDDCAPLDALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILSA 335
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: A0A6H5K1Z6_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z6_9PHAE) HSP 1 Score: 159 bits (403), Expect = 5.120e-43 Identity = 93/195 (47.69%), Postives = 125/195 (64.10%), Query Frame = 0
Query: 140 TVDDCAPLDALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILS 334
++DD A + AR D+VL+GL ++ LRGG+ DP M D++ V SYG L+SVAQ S KGPQL++L+ YDP A+ AVR+ GM LNP +G V VPIPK + E+RE++ KVA K EK+KV +RGIRHK+L+++KK K +F EDDVH R KEID EA A+ L+ KK +IL+
Sbjct: 114 SLDDIAGIPESKARFDKVLQGLTRNFQGLRGGKTDPGMLDNVKVESYGSMTNLASVAQASMKGPQLIILSVYDPGMTKAIEDAVRECGMGLNPYSEGQGQ----------VHVPIPKPTKESREAVAKVAAKHAEKSKVVVRGIRHKILDQIKKKKDSFPEDDVHMRIKEIDKCTKDAEAGIASMLEKKKAEILT 298
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: A0A6V1LRG3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LRG3_HETAK) HSP 1 Score: 133 bits (335), Expect = 2.820e-33 Identity = 82/191 (42.93%), Postives = 112/191 (58.64%), Query Frame = 0
Query: 145 APLDALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILSA 335
A L+ + ++ R ++ L KDL LR GR DPAMFDHL V +YGQ PLS+VA V+ +GPQLLV+ YDP AV A+R+ GM LNPQ +GGA + VP+PK S E RE L ++A + EK K ++R R ++ KK A ED+ R KEID A + +D K+K++L+A
Sbjct: 95 ADLEQVDQKMGRYIQALDKDLRTLRAGRADPAMFDHLQVDAYGQSAPLSAVADVAPRGPQLLVVNVYDPQLKGAVDTAIRECGMGLNPQ--ALEGGA--------LSVPVPKTSKEKREKLARMAKQQGEKTKQNVRNARRSAIDETKK--AGLPEDESKRLVKEIDALCDAKLKAVSDLIDGKQKELLNA 273
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: A0A7S1C1H7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1H7_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.040e-27 Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = 0
Query: 149 ALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILS 334
A +A +D ++ L+++ A LR G P+M DH+ V +YG PL +AQV+A P L+V +DP+T+ AV A+R+SG+NLNPQ DG V VPIPK + ETRES K+A K E+ K+ +R +R + + +K+ + SEDDV R KE+ A A KK+ I++
Sbjct: 24 AWAADMDSHVDWLRREYATLRVGAATPSMLDHVMVDAYGGTVPLPQLAQVAAPSPNLIVCNVFDPSTSSAVAEAIRNSGLNLNPQEDG-----------AVVKVPIPKTTRETRESTAKIAAKLAEETKLAVRRVRQRAMAVIKE-QTGVSEDDVFRLGKEVQAATDAAVDAVTAEFTKKKESIMN 197
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: A0A437MJH9_9PROT (Ribosome-recycling factor n=2 Tax=Rhodovarius TaxID=268408 RepID=A0A437MJH9_9PROT) HSP 1 Score: 112 bits (280), Expect = 3.380e-26 Identity = 77/198 (38.89%), Postives = 102/198 (51.52%), Query Frame = 0
Query: 139 ATVDDCAPLDALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLK--KHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILS 334
A D A + L R+D +E LKK+ LR GR PA+ + + V YG PL+ VA VS GP LL + YD AV +A+RDSG+NLNPQ +G + VP+P ++ E R L K A K E AK+ +R +R +E+ + K K+ SEDD R KE+ T K AA K KDI S
Sbjct: 3 APADPKALKEDLRRRMDSTMETLKKEFQGLRTGRASPALLEPIRVEIYGAVSPLNQVANVSVGGPGLLNVQVYDRGQVKAVEIAIRDSGLNLNPQTEGQT-----------IRVPLPPLTTERRNELSKQAAKYAEGAKIAVRNVRRDGMEQAQGWKKKSEISEDDAKRLEKEVQTLTDDYVKKVDAAFAEKDKDIKS 189
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: UPI001CFEA812 (ribosome recycling factor n=1 Tax=Roseicella sp. GB24 TaxID=2883479 RepID=UPI001CFEA812) HSP 1 Score: 112 bits (279), Expect = 4.730e-26 Identity = 65/157 (41.40%), Postives = 93/157 (59.24%), Query Frame = 0
Query: 150 LSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKH----KANFSEDD 302
L+ R+D +E LKK+ + LR GR PA+ + + V +YGQE PLS VA VS GP +L + +D + AV VA+RDSG+ LNPQ +G + VP+P ++ E R L+K A+K E AKV +RG+R +E++K KA S+DD
Sbjct: 12 LTRRMDGAIEMLKKEFSGLRAGRASPALLEPVRVEAYGQEQPLSQVANVSVSGPAMLSVQVWDKSVVKAVEVAIRDSGLGLNPQTEGQT-----------LRVPLPPLTQERRNELIKAAHKYAEGAKVAVRGVRRDGMEQIKAQEKDKKAPISQDD 157
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: A0A7S2EQG4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQG4_TRICV) HSP 1 Score: 115 bits (287), Expect = 5.400e-26 Identity = 77/191 (40.31%), Postives = 104/191 (54.45%), Query Frame = 0
Query: 148 DALSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKKHKAN----FSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDILS 334
D + +R+DRV+ + +RG P +FD + V +YG PLSSVAQV +GP +L+C+DP TA AV AVRDSGM NP++D G + VPIPK+S ETR SLVK KA E A+ +R IR + +KK K S+DD R KEID + A + KK D+++
Sbjct: 131 DDVKSRMDRVVSATSESFRSVRGSEPTPELFDSIPVRAYGTLAPLSSVAQVVIQGPTRALLSCFDPETAGAVRDAVRDSGMGFNPRIDETGGTVE---------VPIPKVSMETRLSLVKQLGKAAEAARQRIRRIRRAAQDVVKKGKDGKLDGVSKDDAFRVAKEIDAVTEKAIEELNDAYERKKDDVMA 312
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: UPI001A067563 (Ribosome recycling factor n=1 Tax=Acetobacteraceae bacterium H6797 TaxID=2571211 RepID=UPI001A067563) HSP 1 Score: 111 bits (278), Expect = 6.270e-26 Identity = 73/185 (39.46%), Postives = 100/185 (54.05%), Query Frame = 0
Query: 150 LSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLK--KHKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDI 332
LS R+D LE LKK+ + LR GR PA+ + + V +YG PLS VA VS GP +L + +D + AV VA+RDSG+ LNPQ +G T + VP+P ++ E R L K A K E AKV RG+R +E +K + K+ +DD + E+ A AAL K+KDI
Sbjct: 12 LSRRMDGALETLKKEFSGLRTGRASPALLEPIRVEAYGSNQPLSQVANVSVSGPSMLSVQVWDKSVTKAVEVAIRDSGLGLNPQAEG-----------TVIRVPLPPLTTERRNELAKTAAKYAEAAKVAARGVRRDGMETIKGWEKKSEVGKDDAAKWSDEVQKLTDATIKAIDAALAEKEKDI 185
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: UPI001BACEF9D (ribosome recycling factor n=2 Tax=Roseomonas TaxID=125216 RepID=UPI001BACEF9D) HSP 1 Score: 108 bits (271), Expect = 6.850e-25 Identity = 70/187 (37.43%), Postives = 102/187 (54.55%), Query Frame = 0
Query: 150 LSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKK----HKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDI 332
L+ R+D +E L+K+ A LR GR PA+ + + V +YG PL+ VA +S GP LLV+ +D + AV VA+RDSG+ LNPQ +G + VP+P ++ E R LVK A+K E ++V +RG+R +ER+K KA SED+ R E+ + L K+KDI
Sbjct: 12 LTRRMDGAIETLRKEFAGLRTGRASPALLEPVRVEAYGGNSPLNQVANISVGGPGLLVVQVFDRSLTKAVEVAIRDSGLGLNPQAEGQV-----------IRVPLPPLTQERRNDLVKTAHKYAEASRVAIRGVRRDGMERVKAMTADKKAPISEDEGKRTQDEVQKLTDQYIKQVDTLLAEKEKDI 187
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Match: UPI001BA5A89B (Ribosome recycling factor n=1 Tax=Leptolyngbya sp. 15MV TaxID=2819933 RepID=UPI001BA5A89B) HSP 1 Score: 108 bits (270), Expect = 9.570e-25 Identity = 72/187 (38.50%), Postives = 100/187 (53.48%), Query Frame = 0
Query: 150 LSARLDRVLEGLKKDLAVLRGGRVDPAMFDHLTVHSYGQEGPLSSVAQVSAKGPQLLVLTCYDPATAPAVVVAVRDSGMNLNPQLDGNKGGAQRREACTPVLVPIPKMSHETRESLVKVANKATEKAKVHMRGIRHKVLERLKK----HKANFSEDDVHRRHKEIDTKIAAMEAKCAAALDAKKKDI 332
L R+D +E LKK+ A LR GR PA+ + + V +YG PL+ VA +S GP LL + +D + VA+RDSG+ LNPQ +G + VP+P ++ E R L K A K TE A+V +RG+R +E +K KA S+DDV R E+ A + AAL K+KDI
Sbjct: 12 LQRRMDGAMETLKKEFAGLRTGRASPALLEPIRVEAYGTVQPLNQVANISIAGPGLLSVQVWDKSVVKHAEVAIRDSGLGLNPQTEGQV-----------IRVPLPPLTQERRNELAKTAAKYTEAARVAVRGVRRDGMETVKAWEKDKKAEASQDDVKRWSDEVQKMTDAHIKQIDAALAEKEKDI 187 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347783 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|347783|estExt_Genemark1.C_Ctg_160015 ID=Trimin1|347783|estExt_Genemark1.C_Ctg_160015|Name=jgi.p|Trimin1|347783|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bpback to top |