mRNA_3037 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161388
Unique NamemRNA_3037
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A836CJL4_9STRA (Cation/H+ exchanger (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL4_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 9.820e-162
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIIIV 717
            PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIIIV
Sbjct:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIIIV 239          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A835Z7P1_9STRA (Cation/H+ exchanger n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P1_9STRA)

HSP 1 Score: 334 bits (857), Expect = 1.420e-112
Identity = 170/238 (71.43%), Postives = 201/238 (84.45%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIII 714
            P  L TVF+P+L+FVSAW++H H+L RQIWQ+LWLAFPAV++   LTA F+KY L Y W WL CLLLG+I+S TDPVATVALLKE GVS+ LSTL+E  SLFNDGSA VLF +FLGA+EG ELT G VP+ F+R+SLGG A+GFVLG AAAQ LRLIVNDA+AE+TLTLVMC+STWL+A+ TPI VSGV+AVV+MGLTL + GRPFVSPSVQ FM DFW LL+F  NTV+FFVAGII+
Sbjct:   81 PTALFTVFLPVLIFVSAWSMHIHMLQRQIWQILWLAFPAVVVGTALTATFLKYVL-YDWDWLPCLLLGTIVSSTDPVATVALLKEQGVSDKLSTLIEGESLFNDGSALVLFELFLGAIEGHELTPGGVPITFVRSSLGGAALGFVLGYAAAQVLRLIVNDAVAEVTLTLVMCHSTWLLAQGTPIGVSGVMAVVLMGLTLRKQGRPFVSPSVQAFMTDFWILLDFLANTVVFFVAGIIL 317          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A6H5LPB6_9PHAE (Na_H_Exchanger domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LPB6_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 3.620e-65
Identity = 118/239 (49.37%), Postives = 167/239 (69.87%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIIIV 717
            P++L  VF PIL+FVSA+    H+L R++ Q+++LA P VI+ AGLTA F+K+ LPY W W L ++ GS+++ TDPVA VALL+ELGVSE L TL+E  SL NDGSA V+F +FL AVEG      +V     R +LGGPAIG V+G+  A  L  ++NDAL E++LT+++ +ST+ + E T + VSGVL +V  G+ LS +G+P VS  V   + DFW  L+F  +T IFF++G+I++
Sbjct:   98 PRILQIVFFPILIFVSAFNAQFHILERRLGQIIFLAGPGVILGAGLTAVFMKFVLPYDWDWNLSMVFGSMVAATDPVAVVALLEELGVSEKLGTLIEGESLLNDGSAIVVFEVFLEAVEGHSRNWHEVIEFGARLALGGPAIGAVIGIMGAFVLGYVINDALVEVSLTVLLAFSTFALCEATRVKVSGVLGIVACGVVLSYYGKPRVSSPVLPSLMDFWKTLQFFADTTIFFLSGLIVI 336          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A5A8DG13_CAFRO (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DG13_CAFRO)

HSP 1 Score: 213 bits (543), Expect = 7.740e-60
Identity = 115/238 (48.32%), Postives = 157/238 (65.97%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIII 714
            P  +L VF+P L+F SA++V  H+  R  WQ+  LA P + I  GLTAA   Y  PY+WSW   L+ GSIL+ TDPVA VALLKELG S+ L TL+E  SL NDG+A V F  F G V G+E T  ++    ++ SLGGP +G +    +  AL  + NDA++EIT+T+V CYS +++AE T +H SGVLAVV +G+ +S  G+  VSP V+  M  FW +L + +NTVIF ++G+II
Sbjct:   90 PHTILVVFLPTLIFESAFSVDFHIFRRSFWQLFILAVPGMAIGTGLTAAVGVYLFPYQWSWEASLMFGSILAATDPVAVVALLKELGASKQLETLIEGESLLNDGTAIVAFTAFRGMVLGEEKTIEELVGFGLQLSLGGPLLGAIFAAISIVALSYLYNDAVSEITVTVVGCYSVFMIAEATMLHTSGVLAVVTLGVLMSGFGKVHVSPEVEHAMHGFWEMLSYFSNTVIFLLSGVII 327          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 2.170e-59
Identity = 112/238 (47.06%), Postives = 160/238 (67.23%), Query Frame = 1
Query:    4 QVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEG-DELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIII 714
            Q++L VF+PIL+F SA+    H+  R+ WQV+ LA P V I+  +TA+ VKY  PY W W L L+LG ILS TDPVA VALLK+LGVSE L+ L+E  SL ND +  V+F++F  A  G  + +   V V  +R S GGP +G  LG+  +  L  I++DA+ EIT+T+++C+S+++++E T +HVSGVLA V  GL +S +    +SP V+  M  FW++  +  NTVIFFV+G+II
Sbjct:   11 QIILFVFLPILIFESAFETDVHIFQREFWQVVTLAGPGVAIATIITASIVKYVFPYGWDWNLSLMLGGILSATDPVAVVALLKDLGVSERLNVLIEGESLLNDATGIVVFIVFRDAFVGVADSSPAQVLVTAVRMSFGGPMVGLALGMFGSFLLGYIIDDAMTEITVTVIVCFSSFIISEATTLHVSGVLAAVTAGLVMSFYAGGRISPGVEHSMHTFWSMATYVANTVIFFVSGLII 248          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 2.830e-59
Identity = 112/236 (47.46%), Postives = 158/236 (66.95%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTA-GDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAG 705
            P+++    +PIL+F SA+    H+  R++WQVL LA P V+ +  + A F KY  PY W W  CL  G++ S TDPVA VAL+KELGVSE L+ L+E  SL NDG++ V+F +F  A  G   T+ G V   F+R  LGGPA+GF  G+  + A+  I+ D L+EIT T+V+C+S +L+AE T + VSG+L+VV+ GL +S +GRP +SPSVQ  + +FW+L  +  NTVIFF+ G
Sbjct:  114 PEIIFYALLPILIFESAFFTDVHIFLREMWQVLVLAGPGVMAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDASTGIGSTSVGHVVAQFVRLGLGGPAVGFFTGMIGSFAIGYILEDHLSEITCTVVVCFSAFLLAEATILRVSGILSVVIAGLYMSFYGRPRISPSVQESLREFWSLWGYMANTVIFFLTG 349          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A7S2SQN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQN5_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.960e-57
Identity = 111/229 (48.47%), Postives = 150/229 (65.50%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDE-----LTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEF 672
            P+V+L  FIPIL+F S+++   H++  +  QVL+LA P VI+S  LTA FVKY   Y WSW LCLL GS++S TDPVA VAL K+LGV++ L TL+E   L NDGSA V+F + L A+E        L+AGDV    ++ SLGGP +G VL           +ND  +E+TLT+V CY+ +LVAE + +HVSGVLAVV  GL LS +GR  +S  V+  +  FW++ E+
Sbjct:  133 PEVILFAFIPILLFESSFSTDVHIIRHEALQVLFLAGPGVIVSTFLTALFVKYVFNYGWSWTLCLLFGSMMSATDPVAVVALFKDLGVNQRLGTLIEGEGLMNDGSAIVIFNICLAAIEKRRTNNAGLSAGDVVTTALQLSLGGPVVGLVLXXXXXXXXXXXINDLKSEVTLTVVGCYACFLVAEGSKLHVSGVLAVVFAGLYLSFYGRGKISIKVEHSLHSFWHIAEY 361          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A8J9RDR6_9CHLO (Sodium/hydrogen exchanger 7 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RDR6_9CHLO)

HSP 1 Score: 201 bits (511), Expect = 1.550e-55
Identity = 111/238 (46.64%), Postives = 154/238 (64.71%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIII 714
            P +LLT F+PIL+F  A+ +  H + R +W  L LA P V++   LTA  VKY  PY WSW+  LL G++ S TDPVA VA+LKE G+S+ L TLV++ +L NDG+AF LFL+  G  EG ELTA D    F++ ++GGP  G   G+A    LR + N  +AEITLT+V  Y T++VA+   +HVS VLAVV++G+ +S  G   +S  V+  +   W  LEF  NT+IF ++G+II
Sbjct:   84 PTLLLTAFLPILLFAGAFALEWHTVRRLMWSSLLLAGPGVLVGTALTAVLVKYTFPYDWSWVESLLFGAMFSATDPVAVVAVLKEAGLSKRLRTLVDSEALLNDGTAFTLFLLLKGFTEGQELTAADTVREFVQLAVGGPLAGLAFGIATTFWLRFMYNTPMAEITLTIVSAYGTYIVADEL-MHVSAVLAVVILGIYMSAKGVMAISRKVEHPLHIIWEELEFLANTLIFVLSGVII 320          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: C3Z1F9_BRAFL (Cyclic nucleotide-binding domain-containing protein n=6 Tax=Branchiostoma TaxID=7737 RepID=C3Z1F9_BRAFL)

HSP 1 Score: 194 bits (493), Expect = 3.900e-53
Identity = 106/238 (44.54%), Postives = 150/238 (63.03%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIII 714
            P +L  VF+P+L+F SA+ +  H+ W+ I+Q+L +A P +++++ LT     Y   Y W+W + ++ GSI S TDPVA VALLKELG S+ L T++E  SL NDG   V+F MFL    G E  A D  +  ++  LGGPA GFV+    +  L  I NDAL EIT+TL   Y T+ VAE   + VSGVLAVV++GLT+ R     +SP V+ F+  FW ++ +  NTVIF + G++I
Sbjct:  106 PHLLFHVFLPVLIFESAFAMDTHMFWKSIYQILIMALPGLLLASLLTGILSMYTFNYGWNWYVGMMFGSICSATDPVAVVALLKELGASKQLGTVIEGESLLNDGCGIVIFTMFLNLATGVEWAAADFVIFIVKVMLGGPAFGFVMSKLTSFWLANIFNDALTEITITLASTYITFYVAEV--LGVSGVLAVVILGLTMERTS---ISPEVESFLHRFWEMMAYLANTVIFILVGVMI 338          
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Match: A0A8J1Y2V3_OWEFU (Ofus.G13166 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y2V3_OWEFU)

HSP 1 Score: 187 bits (474), Expect = 1.390e-50
Identity = 106/239 (44.35%), Postives = 148/239 (61.92%), Query Frame = 1
Query:    1 PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLG-AVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLSRHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIII 714
            P  LL VF+P+LVF SA+ +  H   +   Q++ LA P + I+ GLT  F  +   Y W+W   ++ GSILS TDPVA VALLK+LG S+ L TL+E  SL NDG+A VLF +FL  A  G  +   ++   F++ +LGGPA G V+G      L  I NDAL EIT+TL   Y T+ + E   + VSGVLAVVV+G+ +S   +  +SP V+ F+  FW +L +  NT+IF + G++I
Sbjct:   75 PHTLLNVFLPVLVFESAFAMEAHTFLKSFVQIVILAIPGLAIATGLTGLFAMFVFTYEWTWTESMMFGSILSATDPVAVVALLKDLGASKQLGTLIEGESLLNDGAAIVLFKVFLKLATPGMTMAGHEILFEFLQVALGGPAFGLVMGKLTTYWLSKIFNDALTEITITLASTYVTYYIGEQF-LKVSGVLAVVVLGVIVSAE-KTSISPEVEAFLHRFWEMLAYLANTLIFILVGVVI 311          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161388 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJL4_9STRA9.820e-162100.00Cation/H+ exchanger (Fragment) n=1 Tax=Tribonema m... [more]
A0A835Z7P1_9STRA1.420e-11271.43Cation/H+ exchanger n=1 Tax=Tribonema minus TaxID=... [more]
A0A6H5LPB6_9PHAE3.620e-6549.37Na_H_Exchanger domain-containing protein n=2 Tax=E... [more]
A0A5A8DG13_CAFRO7.740e-6048.32Cyclic nucleotide-binding domain-containing protei... [more]
D8LKR2_ECTSI2.170e-5947.06Sodium/hydrogen exchanger family protein n=1 Tax=E... [more]
A0A6H5L0H9_9PHAE2.830e-5947.46Na_H_Exchanger domain-containing protein n=1 Tax=E... [more]
A0A7S2SQN5_9STRA1.960e-5748.47Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A8J9RDR6_9CHLO1.550e-5546.64Sodium/hydrogen exchanger 7 n=1 Tax=Coccomyxa sp. ... [more]
C3Z1F9_BRAFL3.900e-5344.54Cyclic nucleotide-binding domain-containing protei... [more]
A0A8J1Y2V3_OWEFU1.390e-5044.35Ofus.G13166 protein n=1 Tax=Owenia fusiformis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:1044345..1047067 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161388|e_gw1.16.258.1
Descriptionpotassium:proton antiporter activity
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0025@1|root,KOG1965@2759|Eukaryota
Evalue2.02e-66
Seed ortholog2880.D7G6H4
Hectar predicted targeting categorysignal peptide
TranscriptId161710
TrackFilteredModels1
ProteinId161388
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161388gene_3037Tribonema minus UTEX_B_3156 geneContig_16 1044345..1047067 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161388Trimin1|161388|e_gw1.16.258.1Tribonema minus UTEX_B_3156 polypeptideContig_16 1044345..1047067 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3037_4exon_3037_4Tribonema minus UTEX_B_3156 exonContig_16 1044345..1044509 -
exon_3037_3exon_3037_3Tribonema minus UTEX_B_3156 exonContig_16 1044956..1045109 -
exon_3037_2exon_3037_2Tribonema minus UTEX_B_3156 exonContig_16 1045954..1046290 -
exon_3037_1exon_3037_1Tribonema minus UTEX_B_3156 exonContig_16 1047004..1047067 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3037CDS_3037Tribonema minus UTEX_B_3156 CDSContig_16 1047004..1047067 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3037 ID=mRNA_3037|Name=jgi.p|Trimin1|161388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=720bp|location=Sequence derived from alignment at Contig_16:1044345..1047067- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCGCAGGTGCTGCTGACGGTGTTCATCCCCATTCTGGTGTTTGTCAGCGC
ATGGACGGTCCACGGCCACCTCCTCTGGCGCCAGATCTGGCAGGTCCTGT
GGCTGGCGTTCCCCGCCGTCATCATCAGCGCGGGCCTTACGGCCGCCTTC
GTCAAGTACGCGCTGCCATACCGCTGGTCGTGGCTGCTGTGCCTGCTGCT
GGGCAGCATCCTGTCGCTCACGGACCCCGTCGCGACAGTTGCGCTGCTCA
AGGAGCTGGGCGTGAGCGAGTCTCTGAGCACGCTGGTGGAGGCGGTTTCG
CTCTTCAACGACGGCTCCGCGTTTGTGCTCTTTCTCATGTTTCTGGGGGC
GGTCGAGGGGGACGAGCTGACCGCGGGGGACGTGCCGGTCATGTTCATCA
GGGCATCGCTCGGCGGGCCAGCGATCGGCTTTGTTCTGGGACTCGCGGCG
GCACAGGCGCTGCGGCTGATTGTCAACGATGCACTCGCGGAAATCACGCT
GACGCTGGTCATGTGCTACTCCACATGGCTGGTGGCGGAGAACACGCCCA
TACACGTCTCTGGCGTGCTGGCGGTGGTGGTGATGGGGCTGACGCTGAGC
CGGCACGGTCGCCCGTTTGTGTCACCCAGCGTGCAGGGCTTCATGGATGA
CTTCTGGAACCTGCTTGAGTTCTGCACCAACACCGTCATCTTCTTCGTTG
CGGGCATCATCATCGTGTGA
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protein sequence of jgi.p|Trimin1|161388

>Trimin1|161388|e_gw1.16.258.1 ID=Trimin1|161388|e_gw1.16.258.1|Name=jgi.p|Trimin1|161388|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp
PQVLLTVFIPILVFVSAWTVHGHLLWRQIWQVLWLAFPAVIISAGLTAAF
VKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVS
LFNDGSAFVLFLMFLGAVEGDELTAGDVPVMFIRASLGGPAIGFVLGLAA
AQALRLIVNDALAEITLTLVMCYSTWLVAENTPIHVSGVLAVVVMGLTLS
RHGRPFVSPSVQGFMDDFWNLLEFCTNTVIFFVAGIIIV*
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mRNA from alignment at Contig_16:1044345..1047067-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3037 ID=mRNA_3037|Name=jgi.p|Trimin1|161388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2723bp|location=Sequence derived from alignment at Contig_16:1044345..1047067- (Tribonema minus UTEX_B_3156 )
CCGCAGGTGCTGCTGACGGTGTTCATCCCCATTCTGGTGTTTGTCAGCGC ATGGACGGTCCACGGTGAGCTTTGGGAGACTGCACAGGGGTACACATTTG CATCATGCACAAAACGCCTTCACCTGCACCTCTGGCATGACAGTGTCGCC GAGGAAACTCCAGGTGCTGTTGCTTCTAGTGTGGGCTGCGTCCAGTGGCA GCATGGCTGCAGCTTGACAATGACGTGTTGACTCTTTTGCTTGCGTACCA GCACGTGAGAAGATGCAAATGTGTGGCACGTCCATGTAAGTGTTGGGGGT CAGGTAAGACTGTGTGTTGTTCTGGCCTGACAGATCTACATGTCGCACAT TCAAATGTCCTGTCACCGATAAACACGATAGTCAGCTTCAACATCTTTTG GCAGGACCCCGCTTGCACAGTCGCTCTGCAGCCTGCCTCCCCCCGTGCCA GATCCGTGAGTCGCCGTCTGTACAGCCGCCATGAGCTCGCCTCGCTGCCG CCGCCTCTCGATAAATTGCCGCTCGCGCAACATTGCCCGCCGTCGCTGCG CACGTCCACAACTTACCTGTGCACAAGCTTCAACTTCAAGTTCATGTGTT GTCGTCCCATGTGCGTGCACGGAACCGCCCGCCCGTCCCCCAGGCAACCT CCACTCGCGCCAGATCTGGCAGGTCTTGCGGCTGGCCGGAAGTGTGATCT CAGCTTCAACTTCTCGTGTTGGCAATCTCAACCTCAACTTTCTGCGTTCG TCTCACATGCACCCCCCCCCCCCGCAGGCCACCTCCTCTGGCGCCAGATC TGGCAGGTCCTGTGGCTGGCGTTCCCCGCCGTCATCATCAGCGCGGGCCT TACGGCCGCCTTCGTCAAGTACGCGCTGCCATACCGCTGGTCGTGGCTGC TGTGCCTGCTGCTGGGCAGCATCCTGTCGCTCACGGACCCCGTCGCGACA GTTGCGCTGCTCAAGGAGCTGGGCGTGAGCGAGTCTCTGAGCACGCTGGT GGAGGCGGTTTCGCTCTTCAACGACGGCTCCGCGTTTGTGCTCTTTCTCA TGTTTCTGGGGGCGGTCGAGGGGGACGAGCTGACCGCGGGGGACGTGCCG GTCATGTTCATCAGGTATGTACGTATATACATATGTGTGTGTGTGTGTGT GTGTGTATGTGGGGGGGTGTTTCGTGGGGTATACCGTATGCTTAGTGTGG ACACCGCGGTTCAACTTCATGTTCATCAGGTGCGTGCGTATGTGTAGGTA GGTATGGGGGGTTGTTCGTGAGGTATACCGTAGGTATCGTGATGAGCCCG TGGTGCACACATCTGTTCTGCGTCTCCTGTGAGCGGATTGCGCCAGAAGC AGGTGCGCAGTTCCGTGATGGACGCTTACTGTGATCTTCCAGATTTGTTG GAAGCGCCACAGAAGAGCTGACTGCCGTGGACGTGCCCGTCATGTTCATC AGGTACATGTGTACGTATGTTTACGTATGTGTGTGTATGTGGGGGGCTGT TTGTGGGATGTACGGTATACCGTACGTATAGTGTGGACGCTGTGGATATT GTACGGTTCTACTTCAACGGGTGTGTGTGTGTGTGTGGAACTGTTCACGG GGTGTACCAAATGTATTCAACTTTAACTCCACGTGTAGGGCATCACTCTC AACGTGCCCCCAAGCTGCGCCGCAAATTTTATGCACCCACAGCAGATCAT CCCCCGCGCTGGCGCCGCGCAATTTATACGCCACCCCAGTACGGCTTGCC TGGCGACGTGTCACCCTGAGAAAACGTTGTTTGAAGTGCTGTGATTCAAC TTCAACTTCAAGACAAGCTCTCGCGCACCCCGCACCTGGCCATTGCATCA CTGTAGCTGCAGCTGCGAACATGACCATCCTTCACCTTCCGCTGGGGCAG GTGCGGTGCGGTTCCATTATTTTGACACTTTCCGCTGTAACTTCAACTTC AACTGCAGGGCATCGCTCGGCGGGCCAGCGATCGGCTTTGTTCTGGGACT CGCGGCGGCACAGGCGCTGCGGCTGATTGTCAACGATGCACTCGCGGAAA TCACGCTGACGCTGGTCATGTGCTACTCCACATGGCTGGTGGCGGAGAAC ACGCCCATACACGTGAGTCGAGGTCGAGTCGTGATGACTCATGCATGCGT GCGAGTCAAGTACTGCTAATGAGTCGTGGCGATCAAGTCCTAGTCACGCT GAGTTCGAGTCCCAGTCTGTGCTTTGCACATGCTTCCTCGTCAAGCACAG GTCCTTACATGTGCATCAAGTACTTCAGTCCTAGCCACATTGACCTAGCG TCCTACATTTGTGCCATTTGCCGAGACTCCACCTCCACAACATGTAAAAT GCCAGTCAAGTGTGACTCGTGACGAGGAAGTCCTCAGCAGAGTCCAAGTA GATTGCACCAGAGGGCTGAAGTGTGAGTATCGCTGAGTCCGGCATGATCA GACGAGAAATGTCACATGACTACTTGTGTAACGGCAGCCTGAGACACAGC AACTTGAATGCACCAATACGATACACACTTTTTGTAATGTTTGTTACTAC CGTTGCAGGTCTCTGGCGTGCTGGCGGTGGTGGTGATGGGGCTGACGCTG AGCCGGCACGGTCGCCCGTTTGTGTCACCCAGCGTGCAGGGCTTCATGGA TGACTTCTGGAACCTGCTTGAGTTCTGCACCAACACCGTCATCTTCTTCG TTGCGGGCATCATCATCGTGTGA
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Coding sequence (CDS) from alignment at Contig_16:1044345..1047067-

>mRNA_3037 ID=mRNA_3037|Name=jgi.p|Trimin1|161388|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=720bp|location=Sequence derived from alignment at Contig_16:1044345..1047067- (Tribonema minus UTEX_B_3156 )
CCGCAGGTGCTGCTGACGGTGTTCATCCCCATTCTGGTGTTTGTCAGCGC
ATGGACGGTCCACGGCCACCTCCTCTGGCGCCAGATCTGGCAGGTCCTGT
GGCTGGCGTTCCCCGCCGTCATCATCAGCGCGGGCCTTACGGCCGCCTTC
GTCAAGTACGCGCTGCCATACCGCTGGTCGTGGCTGCTGTGCCTGCTGCT
GGGCAGCATCCTGTCGCTCACGGACCCCGTCGCGACAGTTGCGCTGCTCA
AGGAGCTGGGCGTGAGCGAGTCTCTGAGCACGCTGGTGGAGGCGGTTTCG
CTCTTCAACGACGGCTCCGCGTTTGTGCTCTTTCTCATGTTTCTGGGGGC
GGTCGAGGGGGACGAGCTGACCGCGGGGGACGTGCCGGTCATGTTCATCA
GGGCATCGCTCGGCGGGCCAGCGATCGGCTTTGTTCTGGGACTCGCGGCG
GCACAGGCGCTGCGGCTGATTGTCAACGATGCACTCGCGGAAATCACGCT
GACGCTGGTCATGTGCTACTCCACATGGCTGGTGGCGGAGAACACGCCCA
TACACGTCTCTGGCGTGCTGGCGGTGGTGGTGATGGGGCTGACGCTGAGC
CGGCACGGTCGCCCGTTTGTGTCACCCAGCGTGCAGGGCTTCATGGATGA
CTTCTGGAACCTGCTTGAGTTCTGCACCAACACCGTCATCTTCTTCGTTG
CGGGCATCATCATCGTGTGA
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