Trimin1|140795|gw1.16.102.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|140795
Unique Name	Trimin1\|140795\|gw1.16.102.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	86

Homology

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BLAST of jgi.p|Trimin1|140795 vs. uniprot
Match: A0A835Z7U3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 9.690e-36
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query:    1 GSHRLVQGATDLCKAHGGKRCLHVDGDGAPCTKSAQAPTDLCKIHGGGPXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGPRCLHVD 86
            GSHRLVQGATDLCKAHGGKRCLHVDGDGAPCTKSAQAPTDLCKIHGGGPXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGPRCLHVD
Sbjct:    1 GSHRLVQGATDLCKAHGGKRCLHVDGDGAPCTKSAQAPTDLCKIHGGGPXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGPRCLHVD 86

[Close]

BLAST of jgi.p|Trimin1|140795 vs. uniprot
Match: A0A835Z8I9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8I9_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 5.720e-5
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 0

Query:   10 TDLCKAHGG-KRCLHVDGDGAPCTKSAQAPTD 40
            T LC  HGG  RC+HVD DGAPCTKSA+A TD
Sbjct:   21 TRLCVGHGGGPRCVHVDDDGAPCTKSARAGTD 52

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|140795 vs. uniprot

BLAST of jgi.p|Trimin1|140795 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z7U3_9STRA	9.690e-36	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z8I9_9STRA	5.720e-5	71.88	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 6..82
None	No IPR available	PANTHER	PTHR31827:SF40	F22C12.10	coord: 6..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_16	contig	Contig_16:1412319..1412576 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|140795	mRNA_3088	Tribonema minus UTEX_B_3156	mRNA	Contig_16 1412319..1412576 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|140795|gw1.16.102.1 ID=Trimin1|140795|gw1.16.102.1|Name=jgi.p|Trimin1|140795|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=86bp
GSHRLVQGATDLCKAHGGKRCLHVDGDGAPCTKSAQAPTDLCKIHGGGPR
CLHVDEDGTPCTKSAVGATDLCKAHGGGGPRCLHVD