Trimin1|353380|estExt_Genemark1.C_Ctg_1590049 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353380
Unique NameTrimin1|353380|estExt_Genemark1.C_Ctg_1590049
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length692
Homology
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835Z6P8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P8_9STRA)

HSP 1 Score: 1209 bits (3127), Expect = 0.000e+0
Identity = 691/691 (100.00%), Postives = 691/691 (100.00%), Query Frame = 0
Query:    1 MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLMSRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSSEQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRVPRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVAAALAQCLGVHFLLCFFPERAXXXXXXXXXXXXXXXXXXXXXAPQPVHL 691
            MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLMSRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSSEQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRVPRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVAAALAQCLGVHFLLCFFPERAXXXXXXXXXXXXXXXXXXXXXAPQPVHL
Sbjct:    1 MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLMSRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSSEQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRVPRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVAAALAQCLGVHFLLCFFPERAXXXXXXXXXXXXXXXXXXXXXAPQPVHL 691          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835ZBJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ9_9STRA)

HSP 1 Score: 375 bits (963), Expect = 8.130e-112
Identity = 267/627 (42.58%), Postives = 318/627 (50.72%), Query Frame = 0
Query:   99 SSEQDARRRLDAPLQLPP-PAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELP--------LLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRV--PRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXX---------GGA-----------------------------------------------------------WLFASDLTLVDYLASHTVVGF---RSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVA 643
            + E   R   D P   PP PAPA +G    S   SS+D+ +CP+CWDLLCR V +ECGH LCEKCCALYL+ QL ++TA PAC AGCQ SVGY LPH ++ LSEFLAK FP+D ERR R+DAE  +L++RVRER+EAAEA   +RRA+Q  G   AGI +  DLNAVA     EG EGGH PAL    EL          ++  P RFYT  GAVL + F+A+RVALLSGW  G   AXXXXX       + +  P LPYAPPAT C RD P                         GGA                                                           WLFASDLTL DY+ S   V F   R ++P    R AALY LL   R   G   G    +R YAPL+  LPRALPP ARAAA  LL+DAVPLLG LPLLHLDP++                    R R  W+GWL GQR +GAD +++  +RL+ +TLTSW  YAR+      +G                                 CLYA F F+L W  R+  GL     EV+ +RL ACAC L    PPPLRRT  Y+ AR  VA
Sbjct:    4 TDEYKLRAHDDGPASTPPLPAPADDGNY--SICRSSIDDHLCPVCWDLLCRLVFIECGHRLCEKCCALYLEGQLHDRTAAPACAAGCQSSVGYALPHSSSELSEFLAKTFPQDWERRTRKDAEHVELIQRVRERAEAAEAHMLQRRAQQKAGATHAGI-IVADLNAVAGEGA-EGEEGGHLPALQAGEELHDIAHVERLWMEPGPLRFYTCFGAVLFLGFIAVRVALLSGWRPGGAAAXXXXXIAVPQRAAVLYAPPLPYAPPATMCQRDRPTAVAARSAGRCRCGSGXXXXXXXSSGGAAFSASTWTFDDYIAGREAVAAPPVAACAHDAPHAXXXXXXXXXXXXXXXXXXXXXXXXAWLFASDLTLADYIGSLAPVPFPVYRLVYP----RTAALYTLLDPLRASHGRRTGVDDFNRLYAPLVGVLPRALPPFARAAAAVLLIDAVPLLGALPLLHLDPNLPAI-----PIPSGGAQEETWRDRSFWLGWLLGQRAVGADTVIITLLRLICITLTSWRCYARILRGIHSRG--------------------------------ACLYAFFRFLLPWDCRVLIGLGWCWMEVVQMRLPACACALLLIAPPPLRRTRRYAAARDCVA 585          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A836CME6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME6_9STRA)

HSP 1 Score: 333 bits (855), Expect = 3.100e-97
Identity = 259/593 (43.68%), Postives = 312/593 (52.61%), Query Frame = 0
Query:  145 LLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXX------EGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXX----------------------------------------GSESRVPRLPYA-------------------------------------------PPATTCPRDD---PXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTF--VLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVA 643
            + C    +  GH L EKCCALYL+ QL ++TA+PAC AGCQ SVGY LPHP++ LSEFLA+ FP+D E+R REDAE A L++RVR+R+E AEA  QRRRA+Q  G   AGI L VDLNAV            EG EGGH PA+  D         PTRF   LG +L + F+A+RVALLSG   G   AXXXXXXXXX                                        G  S V     A                                           PPA  CPR +         XXXXXXXXXXX  AWLFASD TL DYL S   + F +++P    R  ALY LL   R    A  GA +L RFYAPL+ ALPRALPP ARAAAV L+VDAVPLLG+LPLLHLDP++                    R R  W+GWL GQR +GA+++++A +RL+ LT+ SW  YARL     P    PP L  RC   L  KA R ++D  F L+ YPC++A F +   L +   L  GL  L  ++I +RLLACAC L    PPPLRRT  Y+  R  VA
Sbjct:    1 MACNLRIVHAGHRLREKCCALYLEGQLHDRTAVPACAAGCQSSVGYALPHPSSELSEFLARTFPQDWEQRIREDAEHAHLIQRVRDRAEVAEAHMQRRRAQQKAGATHAGIIL-VDLNAVVGEGAERGRGGAEGEEGGHQPAVQPD---------PTRFNMCLGTILFLGFIAVRVALLSGCRPGGAAAXXXXXXXXXXXXXXXXTMTVPQRTAVXXXXXXXXXXXXXXXXXATMCPRGKPSAVAARSAAGXXXXXXXXXXXXXXXXXXXVAAFSASTWTLYDYYAGRYAMGVPPAAACPRKELSHAVARSAXXXXXXXXXXXXSAWLFASDETLFDYLGSFAPLSF-TVYPFMHPRTTALYTLLDPLRAIYCACTGAGILHRFYAPLINALPRALPPFARAAAVVLVVDAVPLLGVLPLLHLDPNLPAI-----PTPNGGMETETWRQRSFWLGWLLGQRALGANMVIIALMRLICLTIASWRCYARLLRGAVPHLRRPP-LRERCMHALWTKAYRYSDDAGFALVVYPCVHAFFWYYPALPFDDALVMGLGFLWLQIILIRLLACACALLLIAPPPLRRTRRYAAVRDRVA 576          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A836CLG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG7_9STRA)

HSP 1 Score: 306 bits (785), Expect = 7.300e-92
Identity = 238/577 (41.25%), Postives = 285/577 (49.39%), Query Frame = 0
Query:  155 GHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAR--EDAESADLVKRVRERSEAAEAQ---TQRRRARQVRGLA-RAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRV---PRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGG------------------------------------------------------------AWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALP--------PLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVAAALAQCLGVHF 654
            GH LCEKCCAL+ + QLR++TA PACPAGCQ SVGY LP P+  LSEFLAK FP+D E+R R  E   S+DL +R R    A +     T  + A +++G A R      V + + A        E       H  +E P ++  PTRFYT LGAVL   F+A+R ALLSGW  G    XXXXXXXX    + V   P  PYA PA  CPRD                  GG                                                            AWLFASDLTL+DY      VGF +L+P    R AALY LL   R   GA  GA  L  FYAPL  ALPR           P  RAAA  LL++AVPLLG+LPLLHLDP++ G                  R RG W+GWL GQR MG D++ +A VRL+ LT+ SW  YARL    APQ H  P   ARC R L  +A    EDVV+  + YPCL+A+F++ L    RL  G   L  +VI VRLLACAC L    PPPLRRT  Y+  R  +A   +   G  F
Sbjct:   13 GHRLCEKCCALFFEGQLRDRTANPACPAGCQCSVGYALPQPSGELSEFLAKAFPQDWEQRMRKGEHCRSSDLWRRSRLVGNARDCSATPTFNKLAGRIKGFAYRRRCCGAVGVASAAVRKACSPTETAAFAMAH--MERPWMKPGPTRFYTRLGAVLFFGFIAVRAALLSGWSPGGXXXXXXXXXXXVPQRTAVSYAPLPPYALPAMMCPRDKHSAIAARSITAAGDSSSGGSDGSGAAFSASTWTLYDYAAGREAVRVPIAAACPRNELSAADAQAXXXXXXXXXXXXXXXAWLFASDLTLLDYFGKLAPVGF-TLYPPVHPRTAALYTLLDPLRASYGACTGAGNLHHFYAPLFGALPRXXXXXXXXXXXPFLRAAAAVLLINAVPLLGVLPLLHLDPNLPGI-----PIASGGAEAETWRHRGFWLGWLLGQRAMGMDVVFIALVRLVCLTIASWRCYARLLRGAAPQLHQLP-FRARCMRALRTRANWYLEDVVWAFVFYPCLHAIFSYPLPLGDRLVIGPGTLWMQVIQVRLLACACALLLIAPPPLRRTRRYAAVRDRLAYRCSMHFGADF 580          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835YT83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT83_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.620e-63
Identity = 139/277 (50.18%), Postives = 168/277 (60.65%), Query Frame = 0
Query:  378 AWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVAAALAQCLGVHF 654
            AWLFASDLTL+DYL S   +GF +L+P    R AALY LL   R   GA AG   L R YAPL+  LPRALPP ARAAA  LLVDA PLLG LPLLHLDP++                    R+   W GWL GQR MGADI+ +A V+L+ LT+ SW  YARL    APQ    P + ARCAR L  +A    ED++++ + +PCLYA + + LSW+FRL  G+  L  EV+ +RLLAC C L    PPPLRRT  Y+ AR+ VA       GV F
Sbjct:  147 AWLFASDLTLLDYLGSLAPLGF-TLYPFVHPRTAALYTLLDPLRASYGACAGGGALRRLYAPLVDTLPRALPPPARAAAAVLLVDAAPLLGALPLLHLDPNLPAMPTATGDGDAGAETWRQRRF---WFGWLLGQRAMGADIVFIALVKLICLTIASWRCYARLLRGAAPQLRVLP-ISARCARALRTRADWYLEDMMYVFVFHPCLYAFYKYRLSWKFRLVMGVGFLWMEVVQMRLLACVCALLLIAPPPLRRTRRYAAARNHVARWCHMRFGVDF 418          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835Z2R0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.030e-37
Identity = 80/121 (66.12%), Postives = 92/121 (76.03%), Query Frame = 0
Query:  155 GHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEG 275
            GH LCEKCCAL+L+ QLR++TAIPACPAGCQ SVGY LPHP   LSE LAK FP+D  RR R+DAE  DL++ VRER+EAAE+Q Q+R A+Q  G A AGI L  DLNAVA     EGGEG
Sbjct:   16 GHRLCEKCCALFLEGQLRDRTAIPACPAGCQCSVGYALPHPTGALSESLAKTFPQDWARRVRQDAEHTDLIQHVRERAEAAESQMQQRCAQQAAGAAHAGIVL-ADLNAVAA----EGGEG 131          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A836CPC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPC4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.480e-36
Identity = 69/106 (65.09%), Postives = 80/106 (75.47%), Query Frame = 0
Query:  109 DAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERR 214
            D P   PP  PA      A+  SSS+DE MCP+CW+LLC+ V LECG  LCEKCCALYL+ QLR++TA+PACPAGCQ SVGY LPHP++ LSEFLAK FP D ERR
Sbjct:   12 DGPASTPP-LPA------AAFDSSSIDEHMCPVCWELLCQLVFLECGLRLCEKCCALYLEGQLRDRTAVPACPAGCQSSVGYALPHPSSELSEFLAKTFPWDWERR 110          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A7S2TYQ3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYQ3_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 7.960e-10
Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 0
Query:  139 CPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVK 226
            CP+C  LL  PV+L+CGH+LCE+C   YL++ +        CPAGCQ  + + LP  N  L   +   FP D ER   ED ++  L K
Sbjct:    6 CPVCRGLLDNPVTLKCGHSLCEECMISYLESGIGRCR----CPAGCQTPIPFDLPPVNITLRRMIQTRFPPDPEREEPEDGKALCLRK 89          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A7S2TYS9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYS9_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 1.450e-9
Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 0
Query:  139 CPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVK 226
            CP+C  LL  PV+L+CGH+LCE+C   YL++ +        CPAGCQ  + + LP  N  L   +   FP D ER   ED ++  L K
Sbjct:  106 CPVCRGLLDNPVTLKCGHSLCEECMISYLESGIGRCR----CPAGCQTPIPFDLPPVNITLRRMIQTRFPPDPEREEPEDGKALCLRK 189          
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A7S3ZCG9_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCG9_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 1.050e-8
Identity = 54/171 (31.58%), Postives = 77/171 (45.03%), Query Frame = 0
Query:  121 RNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAR-EDAE-----------SADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPP 279
            RN  + ++    S+ E  CP+C  LL  PV+L+CGH+LCE+C   YL++ +        CPAGCQ  + + LP  N  L   +   FP   E +   ED +           SA +   +RE SE  + +  RR  R  R       +L    NAV      EG   G+ P
Sbjct:   88 RNTKAASTIDDRSILE--CPVCRQLLDNPVTLKCGHSLCEECMISYLESGIGRCR----CPAGCQTPIPFNLPPVNITLRRMIQTRFPAASEEKEETEDGKALYLRKEMIKNSAAICALLREGSEGRQLEVIRRDIRYARAQ-----DLVARQNAVRMGLTREGNAAGNVP 247          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6P8_9STRA0.000e+0100.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZBJ9_9STRA8.130e-11242.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CME6_9STRA3.100e-9743.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLG7_9STRA7.300e-9241.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YT83_9STRA2.620e-6350.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2R0_9STRA1.030e-3766.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPC4_9STRA1.480e-3665.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2TYQ3_9EUKA7.960e-1040.91Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2TYS9_9EUKA1.450e-940.91Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3ZCG9_9EUKA1.050e-831.58Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 125..241
e-value: 1.5E-13
score: 52.7
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 139..181
e-value: 1.3E-4
score: 21.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..129
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 134..206
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 139..181
score: 9.74522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_159contigContig_159:329794..334036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353380mRNA_13893Tribonema minus UTEX_B_3156 mRNAContig_159 329794..334336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353380|estExt_Genemark1.C_Ctg_1590049 ID=Trimin1|353380|estExt_Genemark1.C_Ctg_1590049|Name=jgi.p|Trimin1|353380|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=692bp
MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLM
SRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSS
EQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPV
SLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLS
EFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGL
ARAGINLDVDLNAVAAAAAAEGGEGGHPPALHVDLELPLLQQRPTRFYTW
LGAVLCVAFVALRVALLSGWHTGAVGAAAAAAAAPPGSESRVPRLPYAPP
ATTCPRDDPAAAAHAAAAAAGGGGDGGAWLFASDLTLVDYLASHTVVGFR
SLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPP
LARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGGGGGGGGGGGGGGGAGR
WRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGH
PPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDA
GLLILSWEVICVRLLACACLLLLLAPPPLRRTPWYSTARSLVAAALAQCL
GVHFLLCFFPERAAAAPAAAEAAAAPGAQQQQQQAPQPVHL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR001841Znf_RING