mRNA_13893 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353380
Unique NamemRNA_13893
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835Z6P8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P8_9STRA)

HSP 1 Score: 1209 bits (3127), Expect = 0.000e+0
Identity = 690/691 (99.86%), Postives = 690/691 (99.86%), Query Frame = 1 
Query:    1 MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLMSRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSSEQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRVPRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXAPPPLRRTPWYSTARSLVAAALAQCLGVHFLLCFFPERAXXXXXXXXXXXXXXXXXXXXXAPQPVHL 2073
            MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLMSRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSSEQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRVPRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXX PPPLRRTPWYSTARSLVAAALAQCLGVHFLLCFFPERAXXXXXXXXXXXXXXXXXXXXXAPQPVHL
Sbjct:    1 MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLMSRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSSEQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRVPRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXXPPPLRRTPWYSTARSLVAAALAQCLGVHFLLCFFPERAXXXXXXXXXXXXXXXXXXXXXAPQPVHL 691
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835ZBJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ9_9STRA)

HSP 1 Score: 377 bits (968), Expect = 2.460e-111
Identity = 268/627 (42.74%), Postives = 319/627 (50.88%), Query Frame = 1 
Query:  295 SSEQDARRRLDAPLQLPP-PAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELP--------LLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRV--PRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXX---------GGA-----------------------------------------------------------WLFASDLTLVDYLASHTVVGF---RSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXAPPPLRRTPWYSTARSLVA 1929
            + E   R   D P   PP PAPA +G    S   SS+D+ +CP+CWDLLCR V +ECGH LCEKCCALYL+ QL ++TA PAC AGCQ SVGY LPH ++ LSEFLAK FP+D ERR R+DAE  +L++RVRER+EAAEA   +RRA+Q  G   AGI +  DLNAVA     EG EGGH PAL    EL          ++  P RFYT  GAVL + F+A+RVALLSGW  G   AXXXXX       + +  P LPYAPPAT C RD P                         GGA                                                           WLFASDLTL DY+ S   V F   R ++P    R AALY LL   R   G   G    +R YAPL+  LPRALPP ARAAA  LL+DAVPLLG LPLLHLDP++                    R R  W+GWL GQR +GAD +++  +RL+ +TLTSW  YAR+      +G                                 CLYA F F+L W  R+  GL     EV+ +RL ACAC L   APPPLRRT  Y+ AR  VA
Sbjct:    4 TDEYKLRAHDDGPASTPPLPAPADDGNY--SICRSSIDDHLCPVCWDLLCRLVFIECGHRLCEKCCALYLEGQLHDRTAAPACAAGCQSSVGYALPHSSSELSEFLAKTFPQDWERRTRKDAEHVELIQRVRERAEAAEAHMLQRRAQQKAGATHAGI-IVADLNAVAGEGA-EGEEGGHLPALQAGEELHDIAHVERLWMEPGPLRFYTCFGAVLFLGFIAVRVALLSGWRPGGAAAXXXXXIAVPQRAAVLYAPPLPYAPPATMCQRDRPTAVAARSAGRCRCGSGXXXXXXXSSGGAAFSASTWTFDDYIAGREAVAAPPVAACAHDAPHAXXXXXXXXXXXXXXXXXXXXXXXXAWLFASDLTLADYIGSLAPVPFPVYRLVYP----RTAALYTLLDPLRASHGRRTGVDDFNRLYAPLVGVLPRALPPFARAAAAVLLIDAVPLLGALPLLHLDPNLPAI-----PIPSGGAQEETWRDRSFWLGWLLGQRAVGADTVIITLLRLICITLTSWRCYARILRGIHSRG--------------------------------ACLYAFFRFLLPWDCRVLIGLGWCWMEVVQMRLPACACALLLIAPPPLRRTRRYAAARDCVA 585
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BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A836CME6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME6_9STRA)

HSP 1 Score: 335 bits (860), Expect = 7.680e-97
Identity = 260/593 (43.84%), Postives = 313/593 (52.78%), Query Frame = 1 
Query:  433 LLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXX------EGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXX----------------------------------------GSESRVPRLPYA-------------------------------------------PPATTCPRDD---PXXXXXXXXXXXXXXXXGGAWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTF--VLSWQFRLDAGLLILSWEVICVRLLACACLLXXXAPPPLRRTPWYSTARSLVA 1929
            + C    +  GH L EKCCALYL+ QL ++TA+PAC AGCQ SVGY LPHP++ LSEFLA+ FP+D E+R REDAE A L++RVR+R+E AEA  QRRRA+Q  G   AGI L VDLNAV            EG EGGH PA+  D         PTRF   LG +L + F+A+RVALLSG   G   AXXXXXXXXX                                        G  S V     A                                           PPA  CPR +         XXXXXXXXXXX  AWLFASD TL DYL S   + F +++P    R  ALY LL   R    A  GA +L RFYAPL+ ALPRALPP ARAAAV L+VDAVPLLG+LPLLHLDP++                    R R  W+GWL GQR +GA+++++A +RL+ LT+ SW  YARL     P    PP L  RC   L  KA R ++D  F L+ YPC++A F +   L +   L  GL  L  ++I +RLLACAC L   APPPLRRT  Y+  R  VA
Sbjct:    1 MACNLRIVHAGHRLREKCCALYLEGQLHDRTAVPACAAGCQSSVGYALPHPSSELSEFLARTFPQDWEQRIREDAEHAHLIQRVRDRAEVAEAHMQRRRAQQKAGATHAGIIL-VDLNAVVGEGAERGRGGAEGEEGGHQPAVQPD---------PTRFNMCLGTILFLGFIAVRVALLSGCRPGGAAAXXXXXXXXXXXXXXXXTMTVPQRTAVXXXXXXXXXXXXXXXXXATMCPRGKPSAVAARSAAGXXXXXXXXXXXXXXXXXXXVAAFSASTWTLYDYYAGRYAMGVPPAAACPRKELSHAVARSAXXXXXXXXXXXXSAWLFASDETLFDYLGSFAPLSF-TVYPFMHPRTTALYTLLDPLRAIYCACTGAGILHRFYAPLINALPRALPPFARAAAVVLVVDAVPLLGVLPLLHLDPNLPAI-----PTPNGGMETETWRQRSFWLGWLLGQRALGANMVIIALMRLICLTIASWRCYARLLRGAVPHLRRPP-LRERCMHALWTKAYRYSDDAGFALVVYPCVHAFFWYYPALPFDDALVMGLGFLWLQIILIRLLACACALLLIAPPPLRRTRRYAAVRDRVA 576
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BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A836CLG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG7_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.440e-91
Identity = 239/577 (41.42%), Postives = 286/577 (49.57%), Query Frame = 1 
Query:  463 GHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAR--EDAESADLVKRVRERSEAAEAQ---TQRRRARQVRGLA-RAGINLDVDLNAVAXXXXXEGGEGGHPPALHVDLELPLLQQRPTRFYTWLGAVLCVAFVALRVALLSGWHTGAVGAXXXXXXXXXGSESRV---PRLPYAPPATTCPRDDPXXXXXXXXXXXXXXXXGG------------------------------------------------------------AWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALP--------PLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXAPPPLRRTPWYSTARSLVAAALAQCLGVHF 1962
            GH LCEKCCAL+ + QLR++TA PACPAGCQ SVGY LP P+  LSEFLAK FP+D E+R R  E   S+DL +R R    A +     T  + A +++G A R      V + + A        E       H  +E P ++  PTRFYT LGAVL   F+A+R ALLSGW  G    XXXXXXXX    + V   P  PYA PA  CPRD                  GG                                                            AWLFASDLTL+DY      VGF +L+P    R AALY LL   R   GA  GA  L  FYAPL  ALPR           P  RAAA  LL++AVPLLG+LPLLHLDP++ G                  R RG W+GWL GQR MG D++ +A VRL+ LT+ SW  YARL    APQ H  P   ARC R L  +A    EDVV+  + YPCL+A+F++ L    RL  G   L  +VI VRLLACAC L   APPPLRRT  Y+  R  +A   +   G  F
Sbjct:   13 GHRLCEKCCALFFEGQLRDRTANPACPAGCQCSVGYALPQPSGELSEFLAKAFPQDWEQRMRKGEHCRSSDLWRRSRLVGNARDCSATPTFNKLAGRIKGFAYRRRCCGAVGVASAAVRKACSPTETAAFAMAH--MERPWMKPGPTRFYTRLGAVLFFGFIAVRAALLSGWSPGGXXXXXXXXXXXVPQRTAVSYAPLPPYALPAMMCPRDKHSAIAARSITAAGDSSSGGSDGSGAAFSASTWTLYDYAAGREAVRVPIAAACPRNELSAADAQAXXXXXXXXXXXXXXXAWLFASDLTLLDYFGKLAPVGF-TLYPPVHPRTAALYTLLDPLRASYGACTGAGNLHHFYAPLFGALPRXXXXXXXXXXXPFLRAAAAVLLINAVPLLGVLPLLHLDPNLPGI-----PIASGGAEAETWRHRGFWLGWLLGQRAMGMDVVFIALVRLVCLTIASWRCYARLLRGAAPQLHQLP-FRARCMRALRTRANWYLEDVVWAFVFYPCLHAIFSYPLPLGDRLVIGPGTLWMQVIQVRLLACACALLLIAPPPLRRTRRYAAVRDRLAYRCSMHFGADF 580
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835YT83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT83_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.600e-63
Identity = 140/277 (50.54%), Postives = 169/277 (61.01%), Query Frame = 1 
Query: 1132 AWLFASDLTLVDYLASHTVVGFRSLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPPLARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGXXXXXXXXXXXXXXXXRWRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGHPPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDAGLLILSWEVICVRLLACACLLXXXAPPPLRRTPWYSTARSLVAAALAQCLGVHF 1962
            AWLFASDLTL+DYL S   +GF +L+P    R AALY LL   R   GA AG   L R YAPL+  LPRALPP ARAAA  LLVDA PLLG LPLLHLDP++                    R+   W GWL GQR MGADI+ +A V+L+ LT+ SW  YARL    APQ    P + ARCAR L  +A    ED++++ + +PCLYA + + LSW+FRL  G+  L  EV+ +RLLAC C L   APPPLRRT  Y+ AR+ VA       GV F
Sbjct:  147 AWLFASDLTLLDYLGSLAPLGF-TLYPFVHPRTAALYTLLDPLRASYGACAGGGALRRLYAPLVDTLPRALPPPARAAAAVLLVDAAPLLGALPLLHLDPNLPAMPTATGDGDAGAETWRQRRF---WFGWLLGQRAMGADIVFIALVKLICLTIASWRCYARLLRGAAPQLRVLP-ISARCARALRTRADWYLEDMMYVFVFHPCLYAFYKYRLSWKFRLVMGVGFLWMEVVQMRLLACVCALLLIAPPPLRRTRRYAAARNHVARWCHMRFGVDF 418
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A835Z2R0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.690e-37
Identity = 80/121 (66.12%), Postives = 92/121 (76.03%), Query Frame = 1 
Query:  463 GHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEG 825
            GH LCEKCCAL+L+ QLR++TAIPACPAGCQ SVGY LPHP   LSE LAK FP+D  RR R+DAE  DL++ VRER+EAAE+Q Q+R A+Q  G A AGI L  DLNAVA     EGGEG
Sbjct:   16 GHRLCEKCCALFLEGQLRDRTAIPACPAGCQCSVGYALPHPTGALSESLAKTFPQDWARRVRQDAEHTDLIQHVRERAEAAESQMQQRCAQQAAGAAHAGIVL-ADLNAVAA----EGGEG 131
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A836CPC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPC4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.250e-36
Identity = 69/106 (65.09%), Postives = 80/106 (75.47%), Query Frame = 1 
Query:  325 DAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERR 642
            D P   PP  PA      A+  SSS+DE MCP+CW+LLC+ V LECG  LCEKCCALYL+ QLR++TA+PACPAGCQ SVGY LPHP++ LSEFLAK FP D ERR
Sbjct:   12 DGPASTPP-LPA------AAFDSSSIDEHMCPVCWELLCQLVFLECGLRLCEKCCALYLEGQLRDRTAVPACPAGCQSSVGYALPHPSSELSEFLAKTFPWDWERR 110
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A7S2TYQ3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYQ3_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 9.660e-10
Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 1 
Query:  415 CPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVK 678
            CP+C  LL  PV+L+CGH+LCE+C   YL++ +        CPAGCQ  + + LP  N  L   +   FP D ER   ED ++  L K
Sbjct:    6 CPVCRGLLDNPVTLKCGHSLCEECMISYLESGIGRCR----CPAGCQTPIPFDLPPVNITLRRMIQTRFPPDPEREEPEDGKALCLRK 89
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A7S2TYS9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYS9_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 1.790e-9
Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 1 
Query:  415 CPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAREDAESADLVK 678
            CP+C  LL  PV+L+CGH+LCE+C   YL++ +        CPAGCQ  + + LP  N  L   +   FP D ER   ED ++  L K
Sbjct:  106 CPVCRGLLDNPVTLKCGHSLCEECMISYLESGIGRCR----CPAGCQTPIPFDLPPVNITLRRMIQTRFPPDPEREEPEDGKALCLRK 189
[Close]
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Match: A0A7S3ZCG9_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCG9_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 1.280e-8
Identity = 54/171 (31.58%), Postives = 77/171 (45.03%), Query Frame = 1 
Query:  361 RNGGSGASTSSSSVDEFMCPICWDLLCRPVSLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLSEFLAKHFPRDCERRAR-EDAE-----------SADLVKRVRERSEAAEAQTQRRRARQVRGLARAGINLDVDLNAVAXXXXXEGGEGGHPP 837
            RN  + ++    S+ E  CP+C  LL  PV+L+CGH+LCE+C   YL++ +        CPAGCQ  + + LP  N  L   +   FP   E +   ED +           SA +   +RE SE  + +  RR  R  R       +L    NAV      EG   G+ P
Sbjct:   88 RNTKAASTIDDRSILE--CPVCRQLLDNPVTLKCGHSLCEECMISYLESGIGRCR----CPAGCQTPIPFNLPPVNITLRRMIQTRFPAASEEKEETEDGKALYLRKEMIKNSAAICALLREGSEGRQLEVIRRDIRYARAQ-----DLVARQNAVRMGLTREGNAAGNVP 247
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353380 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6P8_9STRA0.000e+099.86RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZBJ9_9STRA2.460e-11142.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CME6_9STRA7.680e-9743.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLG7_9STRA1.440e-9141.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YT83_9STRA2.600e-6350.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2R0_9STRA1.690e-3766.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPC4_9STRA2.250e-3665.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2TYQ3_9EUKA9.660e-1040.91Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2TYS9_9EUKA1.790e-940.91Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3ZCG9_9EUKA1.280e-831.58Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_159contigContig_159:329794..334336 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353380|estExt_Genemark1.C_Ctg_1590049
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031624,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0036211,GO:0042176,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044390,GO:0044464,GO:0045732,GO:0045862,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0061136,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:2000058,GO:2000060
Preferred nameLONRF2
DescriptionLON peptidase N-terminal domain and RING finger
COG categoryO
Max annot lvl33208|Metazoa
EggNOG OGsCOG0457@1|root,COG2802@1|root,KOG1124@2759|Eukaryota,KOG4159@2759|Eukaryota,38F1Y@33154|Opisthokonta,3BEYD@33208|Metazoa,3CT7S@33213|Bilateria,487CV@7711|Chordata,48ZDV@7742|Vertebrata
Evalue1.24e-06
Seed ortholog28377.ENSACAP00000007977
Hectar predicted targeting categoryother localisation
TranscriptId353702
TrackFilteredModels1
ProteinId353380
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353380gene_13893Tribonema minus UTEX_B_3156 geneContig_159 329794..334336 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353380Trimin1|353380|estExt_Genemark1.C_Ctg_1590049Tribonema minus UTEX_B_3156 polypeptideContig_159 329794..334036 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13893_1exon_13893_1Tribonema minus UTEX_B_3156 exonContig_159 329794..329967 +
exon_13893_2exon_13893_2Tribonema minus UTEX_B_3156 exonContig_159 330073..330154 +
exon_13893_3exon_13893_3Tribonema minus UTEX_B_3156 exonContig_159 330208..330411 +
exon_13893_4exon_13893_4Tribonema minus UTEX_B_3156 exonContig_159 330935..331126 +
exon_13893_5exon_13893_5Tribonema minus UTEX_B_3156 exonContig_159 331874..332067 +
exon_13893_6exon_13893_6Tribonema minus UTEX_B_3156 exonContig_159 332475..333374 +
exon_13893_7exon_13893_7Tribonema minus UTEX_B_3156 exonContig_159 333707..334336 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13893CDS_13893Tribonema minus UTEX_B_3156 CDSContig_159 329794..329967 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13893UTR3_13893Tribonema minus UTEX_B_3156 three_prime_UTRContig_159 334037..334336 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13893 ID=mRNA_13893|Name=jgi.p|Trimin1|353380|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2376bp|location=Sequence derived from alignment at Contig_159:329794..334336+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGACGGTGGAGGCGGAGCAGCAGCAGCAGTTCCGGAATCGCTCCCA
GCACGGGTCGCCAGACCTCTGCGGTCCAATGCAGGTGTGGCCAAGTGGGC
GGCTCAGCAGCAACGCCAGCATCAGGAGCTGCCCCGGGCTGCAGCTGATG
AGTCGGCTGCAGAGGCCGGTGCTGTCGGCTCGGAGCGCCACCCAGGATGG
CTTTGGGATGATACGCAGTCAGATCGACGGCCAGCAGGAGCAGCGGCGGC
GGCTGCGGCGCGATCGTTGGGCTGAGCTGTGGGAGATGGTGCCATCCAGT
GAGCAAGATGCGCGGCGGCGGCTCGATGCGCCGCTGCAGCTGCCGCCGCC
CGCACCTGCGCGCAACGGCGGCAGCGGCGCCAGCACCAGCAGCAGCAGCG
TCGACGAGTTCATGTGCCCCATCTGCTGGGACCTGCTGTGCCGGCCGGTG
TCCCTGGAATGCGGCCACACGCTGTGCGAGAAGTGCTGCGCGCTGTACCT
GGACACGCAGCTGCGCAACCAGACGGCGATACCCGCGTGCCCCGCGGGGT
GCCAGCGCTCCGTGGGCTACACGCTGCCGCACCCCAACAACCTGCTGTCG
GAGTTCCTGGCGAAGCACTTTCCGCGCGACTGCGAGCGGCGCGCACGCGA
GGACGCGGAGAGCGCGGACCTGGTGAAGCGCGTGCGCGAGCGCTCCGAGG
CGGCGGAGGCGCAGACGCAGCGGCGGCGCGCGCGGCAGGTGCGCGGGCTC
GCGCGCGCGGGCATCAACCTCGACGTGGACCTGAACGCGGTGGCGGCGGC
GGCGGCGGCGGAGGGGGGGGAGGGCGGCCACCCGCCGGCGCTGCACGTCG
ATCTGGAGCTGCCGCTGCTGCAGCAGCGCCCCACGCGCTTCTACACGTGG
CTCGGCGCCGTGCTGTGCGTCGCCTTCGTGGCGCTGCGCGTGGCGCTGCT
CAGCGGCTGGCACACTGGCGCAGTCGGCGCTGCTGCTGCTGCCGCCGCGG
CGCCGCCAGGCTCCGAGTCGCGCGTGCCGCGCCTCCCCTATGCGCCCCCC
GCAACCACGTGCCCTCGCGACGACCCTGCTGCTGCTGCGCACGCCGCGGC
GGCAGCAGCGGGCGGCGGCGGCGACGGCGGCGCGTGGCTCTTCGCGTCCG
ACCTGACGCTCGTCGACTACCTCGCGAGCCACACGGTGGTGGGGTTCCGG
TCGCTGTTCCCGTGCGCGAGCGCGCGCGTCGCGGCGCTGTACCTGCTGCT
CGCGCAGCCGCGCCTGCGCCGCGGCGCCGGCGCCGGCGCCGCGCTGCTCG
ACCGCTTCTACGCGCCGCTCCTCGCCGCGCTGCCGCGCGCGCTGCCGCCG
CTCGCGCGCGCCGCCGCCGTCGCGCTGCTCGTCGACGCCGTCCCGCTGCT
CGGGCTGCTGCCGCTGCTGCACCTGGACCCGGACGTCGGCGGCAGTGGCG
GTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGGGCGC
TGGCGCGGCGGCTGGATCGGCTGGCTGTCCGGGCAGCGCACTATGGGCGC
GGACATCATCCTCGTCGCATTTGTGCGGCTGCTCGGCCTCACGCTCACGA
GCTGGTGCAGCTACGCGCGCCTGTTCTGCGTCGGCGCGCCGCAGGGGCAC
CCGCCGCCGACGCTGGGCGCGCGCTGCGCGCGCGTGCTGCTGCGCAAGGC
GATGCGCTGCACGGAGGACGTCGTGTTCATCCTCCTGGGGTACCCGTGCC
TCTACGCGCTCTTCACGTTCGTCCTCTCGTGGCAGTTCCGCCTCGACGCG
GGCCTTCTCATCCTGTCCTGGGAGGTCATCTGCGTGCGCCTGCTCGCGTG
CGCGTGCCTGCTGCTGCTGCTCGCGCCGCCGCCGCTGCGCCGCACGCCGT
GGTACTCGACCGCGCGCAGCCTCGTCGCCGCCGCGCTCGCGCAGTGCCTC
GGCGTCCACTTCCTGCTGTGCTTCTTCCCGGAGCGCGCGGCGGCGGCGCC
GGCAGCGGCAGAAGCAGCGGCGGCGCCGGGCGCGCAGCAGCAGCAGCAGC
AGGCGCCGCAGCCCGTGCATCTGTAGGCGGCGGCACCGGCGGCGGCGGCA
GCGCAGTGAGGACCGCCGCTGCCGCGCAGCACGCCTCCTGTGCAGCCGAC
GGCGCTCGGTCACGGTGCGGCAGGTGGGCCAGAGGCAGGGTTTGTGTGCC
CTGCTGTGTTGCTCATGGCAGGTGCGCTGACGGTGAAGCATGCACCGATG
GCAGAGCAGCAGCAGCGGCGGCGCTGCCACCGCGGCGCTCGCCGTGCGCG
CAGCGGTGCCTCGCCCCATCCCCCCAGCCGGCGCCGGGCGCTCACCCACC
ACATTGCGCTGTCGCCGCCGCCGCCA
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protein sequence of jgi.p|Trimin1|353380

>Trimin1|353380|estExt_Genemark1.C_Ctg_1590049 ID=Trimin1|353380|estExt_Genemark1.C_Ctg_1590049|Name=jgi.p|Trimin1|353380|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=692bp
MATVEAEQQQQFRNRSQHGSPDLCGPMQVWPSGRLSSNASIRSCPGLQLM
SRLQRPVLSARSATQDGFGMIRSQIDGQQEQRRRLRRDRWAELWEMVPSS
EQDARRRLDAPLQLPPPAPARNGGSGASTSSSSVDEFMCPICWDLLCRPV
SLECGHTLCEKCCALYLDTQLRNQTAIPACPAGCQRSVGYTLPHPNNLLS
EFLAKHFPRDCERRAREDAESADLVKRVRERSEAAEAQTQRRRARQVRGL
ARAGINLDVDLNAVAAAAAAEGGEGGHPPALHVDLELPLLQQRPTRFYTW
LGAVLCVAFVALRVALLSGWHTGAVGAAAAAAAAPPGSESRVPRLPYAPP
ATTCPRDDPAAAAHAAAAAAGGGGDGGAWLFASDLTLVDYLASHTVVGFR
SLFPCASARVAALYLLLAQPRLRRGAGAGAALLDRFYAPLLAALPRALPP
LARAAAVALLVDAVPLLGLLPLLHLDPDVGGSGGGGGGGGGGGGGGGAGR
WRGGWIGWLSGQRTMGADIILVAFVRLLGLTLTSWCSYARLFCVGAPQGH
PPPTLGARCARVLLRKAMRCTEDVVFILLGYPCLYALFTFVLSWQFRLDA
GLLILSWEVICVRLLACACLLLLLAPPPLRRTPWYSTARSLVAAALAQCL
GVHFLLCFFPERAAAAPAAAEAAAAPGAQQQQQQAPQPVHL*
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mRNA from alignment at Contig_159:329794..334336+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13893 ID=mRNA_13893|Name=jgi.p|Trimin1|353380|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4543bp|location=Sequence derived from alignment at Contig_159:329794..334336+ (Tribonema minus UTEX_B_3156 )
ATGGCGACGGTGGAGGCGGAGCAGCAGCAGCAGTTCCGGAATCGCTCCCA
GCACGGGTCGCCAGACCTCTGCGGTCCAATGCAGGTGTGGCCAAGTGGGC
GGCTCAGCAGCAACGCCAGCATCAGGAGCTGCCCCGGGCTGCAGCTGATG
AGTCGGCTGCAGAGGCCGGTGCTGGTCGCGCAGCAGATCGCAGGCCTACC
TTACCGCCCGCCGCTGCGCAGCGCTTGCCGTCGGCTGCGGGGCGCGCCGC
AGTGACGCGTGCTCGTGCTCTACCCGCAGTCGGCTCGGAGCGCCACCCAG
GATGGCTTTGGGATGATACGCAGTCAGATCGACGGCCAGCAGGAGCAGCG
GCGGCGGCTGCGTCAGGCCGAGGGAACCAAAACGCGAGGCGACCCTTGAA
TGGCGACAGCGAAGGGCGCGATCGTTGGGCTGAGCTGTGGGAGATGGTGC
CATCCAGTGAGCAAGATGCGCGGCGGCGGCTCGATGCGCCGCTGCAGCTG
CCGCCGCCCGCACCTGCGCGCAACGGCGGCAGCGGCGCCAGCACCAGCAG
CAGCAGCGTCGACGAGTTCATGTGCCCCATCTGCTGGGACCTGCTGTGCC
GGCCGGTGTCCCTGGAATGTGAGTGGCTGGCGCGCTTCGCGTGAGCTCCG
GTTCTGGCCGACGTGCCTGAACGCAGATATGCATGCATGCAGCGATGCGC
AGCCGCAACTGGTGCGTCAGGAAGTGTTCACAGCTGTCAAGGTCGCGCTG
GCCTGTGCTGGCAGGGTGGCCGATCGGGTGCCCCCACGCCCATTGCCGCA
CGTTGAACCGGTACGCGCCACAACCTGTGGATCATTTGCTACAAGTTTCC
TCATACACCTTGGCTGCAGCTCACCCAGGCACCTGGTACTAGCTGACAAA
GCAATAATCTGCAGCACTGTTCAGCAGCCCTGCGCGCGGCACCACGCCTG
CCACCGCACATGCGCCGCACCGCAGCTGCCGCCACCTCCGGCGGCAGCGC
ACACAACTCCCCAACTCCGCAGCGCTGCGCTGCGCTACCACCTCCGTGGA
ACCTCATACTCCCTGCGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTGTGC
CCCCCCTCCCCCCCCCCCCCCCCCCCCACACACACACACAGGCGGCCACA
CGCTGTGCGAGAAGTGCTGCGCGCTGTACCTGGACACGCAGCTGCGCAAC
CAGACGGCGATACCCGCGTGCCCCGCGGGGTGCCAGCGCTCCGTGGGCTA
CACGCTGCCGCACCCCAACAACCTGCTGTCGGAGTTCCTGGCGAAGCACT
TTCCGCGCGACTGCGAGCGGCGCGCACGCGAGGGTGAGCGCTGCTGTGTT
TGTGCCTGGCGCCCCCCCGTGTAGACAGTTCGCGTTGTCTGCGATTTGAT
GGAGACCTATGGCACGTGAGGTCGCTGCGACTCGCATGGTCGCTCCTTAA
GGTTAGCGTCGGGAGTGGACATGGGTGACGCTGGCGGGATCGGCGCGGCC
CGCAGGTTTACTGATGGCGCTCCCACGGTGAGCTGGCGCACCAGAGCAGC
TGTGGCATAGCGTATCGTACGACTGTATCGCGCGAGCGCGGTGTGGCGCG
CCCTTGCTCTCAAGCACATACCGCTGTGAAATCAGCATTGCAGATACATC
ACAGCCGTGTGCCTAAACATTTGCGGGACAAATCATCGGACTAGCGGTAG
CATGAAGCGCCATGAGCGCCCGCTTGACGCAATGGCGGCAGCGTCCGACG
CCGTTACGCCTCAGCACTCGCAGACGGCCCGGCGCGGCGGCGCAGGCGCA
GGTGCAGCGGCCTCACCTCCCCTCGTGCGCAGCACAGCTGCGGACCGTCG
AAGCCGGAAGCAACGCTCCCGCCTCCCCAGTTCATGCTCCGGGAAGTCCT
GACAGCCTTATCTGCCCCCCCCCCCCCCCCCCCCCACGCGCCGCGCCACC
CCCCCGCCGCGCGCTGCGCAGCTGCGACCGCTAGCGGCTCAGAGCACTAC
CCGCCCCCTCCCCCAGCCCCCCCCCCCCATCATCCATGTCTCATGCGACC
CCCACGCTTGCGCTGCGCGCCGCCGCACAGACGCGGAGAGCGCGGACCTG
GTGAAGCGCGTGCGCGAGCGCTCCGAGGCGGCGGAGGCGCAGACGCAGCG
GCGGCGCGCGCGGCAGGTGCGCGGGCTCGCGCGCGCGGGCATCAACCTCG
ACGTGGACCTGAACGCGGTGGCGGCGGCGGCGGCGGCGGAGGGGGGGGAG
GGCGGCCACCCGCCGGCGCTGCACGTGAGTGATGTTTTGTGCCTCGGCTC
TGCGATGCGCAGCAACGGCGCGTTTCACTTGTGCTGCCGGGCTCGGATTG
GGAGTAGTGCACAATGGCACTGCGTGCGTATGTTTGAATTTCGCATTCAT
GAGACAACGGCATGCCTGCCAGTTTGACCCTTTTTTTTACGTTTTCGCCA
GTGACGGCGAAACTTCACATATGACTGCCTTGTGTGTTTGGATTGCTGGC
GGCGACGACAGTGGGACAGCGGCAGGCGCGGGCTGCACGTGCCAAAAGGG
ATGAGGGCAAGCGTACGGAGTTTTTGTCTCTTTTGTGAATGGCATGCATG
TGCAGATAGGGGAATGTAGAGGGCGTCGCAGCAGCACCTGCGACCAGTGA
CCCGCTGACACCGTGGCCTCGCCGCCTGCAGGTCGATCTGGAGCTGCCGC
TGCTGCAGCAGCGCCCCACGCGCTTCTACACGTGGCTCGGCGCCGTGCTG
TGCGTCGCCTTCGTGGCGCTGCGCGTGGCGCTGCTCAGCGGCTGGCACAC
TGGCGCAGTCGGCGCTGCTGCTGCTGCCGCCGCGGCGCCGCCAGGCTCCG
AGTCGCGCGTGCCGCGCCTCCCCTATGCGCCCCCCGCAACCACGTGCCCT
CGCGACGACCCTGCTGCTGCTGCGCACGCCGCGGCGGCAGCAGCGGGCGG
CGGCGGCGACGGCGGCGCGTGGCTCTTCGCGTCCGACCTGACGCTCGTCG
ACTACCTCGCGAGCCACACGGTGGTGGGGTTCCGGTCGCTGTTCCCGTGC
GCGAGCGCGCGCGTCGCGGCGCTGTACCTGCTGCTCGCGCAGCCGCGCCT
GCGCCGCGGCGCCGGCGCCGGCGCCGCGCTGCTCGACCGCTTCTACGCGC
CGCTCCTCGCCGCGCTGCCGCGCGCGCTGCCGCCGCTCGCGCGCGCCGCC
GCCGTCGCGCTGCTCGTCGACGCCGTCCCGCTGCTCGGGCTGCTGCCGCT
GCTGCACCTGGACCCGGACGTCGGCGGCAGTGGCGGTGGCGGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCGGCGGCGCGGGGCGCTGGCGCGGCGGCTGG
ATCGGCTGGCTGTCCGGGCAGCGCACTATGGGCGCGGACATCATCCTCGT
CGCATTTGTGCGGCTGCTCGGCCTCACGCTCACGAGCTGGTGCAGCTACG
CGCGCCTGTTCTGCGTCGGCGCGCCGCAGGGGCACCCGCCGCCGACGCTG
GGCGCGCGCTGCGCGCGCGTGCTGCTGCGCAAGGCGATGCGCTGCACGGA
GGACGTCGTGTTCATCCTCCTGGGGTACCCGGTGAGCGCAGACAGCCGCT
CTTCCGCGTTTCGAGATATATATTGAGGTGACAAGTAGAAGTTGTGCATG
TTCATTACAAACGAAAGGCGACTGAGCTGTGCGTCACTGCCGCGCCGCCA
CAAAGCGCCCGGCACGGCAAAACGGTGTTTGCTGTCAAGCAGCGGGGCGG
TTTGCTGAGCGCGCGCCCTGCCCATCACACAGACTTGAACGCCTCCATGC
AGCAGCCTAGTGTGTCACGAGCGCGCCGCCGCCCCATTGGCAGATGCATA
CGACTCACCCCCTCCCCCCTCACCCCCCCTGCCCCCCCCCCGCCCCCCCC
TTTTCCCCCGCAGTGCCTCTACGCGCTCTTCACGTTCGTCCTCTCGTGGC
AGTTCCGCCTCGACGCGGGCCTTCTCATCCTGTCCTGGGAGGTCATCTGC
GTGCGCCTGCTCGCGTGCGCGTGCCTGCTGCTGCTGCTCGCGCCGCCGCC
GCTGCGCCGCACGCCGTGGTACTCGACCGCGCGCAGCCTCGTCGCCGCCG
CGCTCGCGCAGTGCCTCGGCGTCCACTTCCTGCTGTGCTTCTTCCCGGAG
CGCGCGGCGGCGGCGCCGGCAGCGGCAGAAGCAGCGGCGGCGCCGGGCGC
GCAGCAGCAGCAGCAGCAGGCGCCGCAGCCCGTGCATCTGTAGGCGGCGG
CACCGGCGGCGGCGGCAGCGCAGTGAGGACCGCCGCTGCCGCGCAGCACG
CCTCCTGTGCAGCCGACGGCGCTCGGTCACGGTGCGGCAGGTGGGCCAGA
GGCAGGGTTTGTGTGCCCTGCTGTGTTGCTCATGGCAGGTGCGCTGACGG
TGAAGCATGCACCGATGGCAGAGCAGCAGCAGCGGCGGCGCTGCCACCGC
GGCGCTCGCCGTGCGCGCAGCGGTGCCTCGCCCCATCCCCCCAGCCGGCG
CCGGGCGCTCACCCACCACATTGCGCTGTCGCCGCCGCCGCCA
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Coding sequence (CDS) from alignment at Contig_159:329794..334336+

>mRNA_13893 ID=mRNA_13893|Name=jgi.p|Trimin1|353380|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2076bp|location=Sequence derived from alignment at Contig_159:329794..334336+ (Tribonema minus UTEX_B_3156 )
ATGGCGACGGTGGAGGCGGAGCAGCAGCAGCAGTTCCGGAATCGCTCCCA
GCACGGGTCGCCAGACCTCTGCGGTCCAATGCAGGTGTGGCCAAGTGGGC
GGCTCAGCAGCAACGCCAGCATCAGGAGCTGCCCCGGGCTGCAGCTGATG
AGTCGGCTGCAGAGGCCGGTGCTGTCGGCTCGGAGCGCCACCCAGGATGG
CTTTGGGATGATACGCAGTCAGATCGACGGCCAGCAGGAGCAGCGGCGGC
GGCTGCGGCGCGATCGTTGGGCTGAGCTGTGGGAGATGGTGCCATCCAGT
GAGCAAGATGCGCGGCGGCGGCTCGATGCGCCGCTGCAGCTGCCGCCGCC
CGCACCTGCGCGCAACGGCGGCAGCGGCGCCAGCACCAGCAGCAGCAGCG
TCGACGAGTTCATGTGCCCCATCTGCTGGGACCTGCTGTGCCGGCCGGTG
TCCCTGGAATGCGGCCACACGCTGTGCGAGAAGTGCTGCGCGCTGTACCT
GGACACGCAGCTGCGCAACCAGACGGCGATACCCGCGTGCCCCGCGGGGT
GCCAGCGCTCCGTGGGCTACACGCTGCCGCACCCCAACAACCTGCTGTCG
GAGTTCCTGGCGAAGCACTTTCCGCGCGACTGCGAGCGGCGCGCACGCGA
GGACGCGGAGAGCGCGGACCTGGTGAAGCGCGTGCGCGAGCGCTCCGAGG
CGGCGGAGGCGCAGACGCAGCGGCGGCGCGCGCGGCAGGTGCGCGGGCTC
GCGCGCGCGGGCATCAACCTCGACGTGGACCTGAACGCGGTGGCGGCGGC
GGCGGCGGCGGAGGGGGGGGAGGGCGGCCACCCGCCGGCGCTGCACGTCG
ATCTGGAGCTGCCGCTGCTGCAGCAGCGCCCCACGCGCTTCTACACGTGG
CTCGGCGCCGTGCTGTGCGTCGCCTTCGTGGCGCTGCGCGTGGCGCTGCT
CAGCGGCTGGCACACTGGCGCAGTCGGCGCTGCTGCTGCTGCCGCCGCGG
CGCCGCCAGGCTCCGAGTCGCGCGTGCCGCGCCTCCCCTATGCGCCCCCC
GCAACCACGTGCCCTCGCGACGACCCTGCTGCTGCTGCGCACGCCGCGGC
GGCAGCAGCGGGCGGCGGCGGCGACGGCGGCGCGTGGCTCTTCGCGTCCG
ACCTGACGCTCGTCGACTACCTCGCGAGCCACACGGTGGTGGGGTTCCGG
TCGCTGTTCCCGTGCGCGAGCGCGCGCGTCGCGGCGCTGTACCTGCTGCT
CGCGCAGCCGCGCCTGCGCCGCGGCGCCGGCGCCGGCGCCGCGCTGCTCG
ACCGCTTCTACGCGCCGCTCCTCGCCGCGCTGCCGCGCGCGCTGCCGCCG
CTCGCGCGCGCCGCCGCCGTCGCGCTGCTCGTCGACGCCGTCCCGCTGCT
CGGGCTGCTGCCGCTGCTGCACCTGGACCCGGACGTCGGCGGCAGTGGCG
GTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGGGCGC
TGGCGCGGCGGCTGGATCGGCTGGCTGTCCGGGCAGCGCACTATGGGCGC
GGACATCATCCTCGTCGCATTTGTGCGGCTGCTCGGCCTCACGCTCACGA
GCTGGTGCAGCTACGCGCGCCTGTTCTGCGTCGGCGCGCCGCAGGGGCAC
CCGCCGCCGACGCTGGGCGCGCGCTGCGCGCGCGTGCTGCTGCGCAAGGC
GATGCGCTGCACGGAGGACGTCGTGTTCATCCTCCTGGGGTACCCGTGCC
TCTACGCGCTCTTCACGTTCGTCCTCTCGTGGCAGTTCCGCCTCGACGCG
GGCCTTCTCATCCTGTCCTGGGAGGTCATCTGCGTGCGCCTGCTCGCGTG
CGCGTGCCTGCTGCTGCTGCTCGCGCCGCCGCCGCTGCGCCGCACGCCGT
GGTACTCGACCGCGCGCAGCCTCGTCGCCGCCGCGCTCGCGCAGTGCCTC
GGCGTCCACTTCCTGCTGTGCTTCTTCCCGGAGCGCGCGGCGGCGGCGCC
GGCAGCGGCAGAAGCAGCGGCGGCGCCGGGCGCGCAGCAGCAGCAGCAGC
AGGCGCCGCAGCCCGTGCATCTGTAG
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