Trimin1|353349|estExt_Genemark1.C_Ctg_1580021 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353349
Unique Name	Trimin1\|353349\|estExt_Genemark1.C_Ctg_1580021
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1199

Homology

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BLAST of jgi.p|Trimin1|353349 vs. uniprot
Match: A0A836CME3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME3_9STRA)

HSP 1 Score: 1670 bits (4325), Expect = 0.000e+0
Identity = 1198/1198 (100.00%), Postives = 1198/1198 (100.00%), Query Frame = 0

Query:    1 MTAEGWRGWETVGGVGMTSAAVIPRARQAHGLPPELRAIPLTAPAPEQYGAGKREVAVGGAGAXXXXXXXXQRTGATKGPPTGIGGAAALRRGREEVRQLAGTLEEVRREMAEHTRRLTFALQCCCRRCTYITCAXXXXXXXXXXXXXXXXLEQELARSRXXXXXXXXXXXXXXXXXXXXXXXXXEGAPSPSDRGSSGGGTRCGGKKEQESLQQCSKGSGSGGMRSGTANAYMSFCSAATASVIEEVEIEEEVDSEGEEAEGWYMVLEPTRRARVRDRVTVSDANFHAAADHVEVELLPQPRAAPDWGQDGPHGPPLSPPQGIEVEDEGGGVEVDTPVPGLGAPGLISVRGTGEAHLGGDATAGGARDLSLQAGRLGGGMGHGRLRLAGGDDDAEECVTLPMGVLLGPGRPRAQIARQWERMAEGLSRLSAAEQXXXXXXXXXXXXXXXXXXIPSAALSEERAQERHQAAPPLASEVLELVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQQQLLGDLQREALGARNRSEAEAGEAARVSAQLQLNAALERVAALEASLHQQLQLQHQPVVDAPPPPPREPSAERPAVPEPPVPEELSESVPPPPRPAFSTNFGRLLSGGRGWQRLPLEKGGSDDEEEETRADVAAESAELPESADALPSVDHVLWGASHHQPRSSSGSGSSAQPGAADRAAQRARGAALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRVAVDRSAQTXXXXXXXXXXXXXXXXXXXXXXQRPNTEGAVAAAVAAAVLSMASRFRDKCXXXXXXXXXXXXXXXXXXSDVEARAXXXXXHAQQQSQQLADAMSAVNQDRARAQLEMHDKLAEAQAQAQLTEATLRRDLERLKERARLAEQQXXXXXXXXXXXXXXXRARAAPQQRSILPARPPSSTSTSSSSTRSGGFLPLDISSFLPAVRLQPXXXXXXXXXXXXXXSTADSRLSEGQLDIPAGAHYSDGERVALTPRGRHVIEEGEWPRQHSHFPPXXXXXXXXXXRMVLAMGAYGSGRLRVRRRRPSARSGGGXXXXXXXXXXXXXXXXXXSPLSSPQGPSPQASASVDSYGTPVPWRLAARTAAACQDGSGASGASSRQSGXXXXXXXXXSCSSGDGSAPLAARGVLRLSASQRSGSXXXXXXXXXSTVDSPERRFVAAAARLGRQGDLEPGEILPS 1198
            MTAEGWRGWETVGGVGMTSAAVIPRARQAHGLPPELRAIPLTAPAPEQYGAGKREVAVGGAGAXXXXXXXXQRTGATKGPPTGIGGAAALRRGREEVRQLAGTLEEVRREMAEHTRRLTFALQCCCRRCTYITCAXXXXXXXXXXXXXXXXLEQELARSRXXXXXXXXXXXXXXXXXXXXXXXXXEGAPSPSDRGSSGGGTRCGGKKEQESLQQCSKGSGSGGMRSGTANAYMSFCSAATASVIEEVEIEEEVDSEGEEAEGWYMVLEPTRRARVRDRVTVSDANFHAAADHVEVELLPQPRAAPDWGQDGPHGPPLSPPQGIEVEDEGGGVEVDTPVPGLGAPGLISVRGTGEAHLGGDATAGGARDLSLQAGRLGGGMGHGRLRLAGGDDDAEECVTLPMGVLLGPGRPRAQIARQWERMAEGLSRLSAAEQXXXXXXXXXXXXXXXXXXIPSAALSEERAQERHQAAPPLASEVLELVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQQQLLGDLQREALGARNRSEAEAGEAARVSAQLQLNAALERVAALEASLHQQLQLQHQPVVDAPPPPPREPSAERPAVPEPPVPEELSESVPPPPRPAFSTNFGRLLSGGRGWQRLPLEKGGSDDEEEETRADVAAESAELPESADALPSVDHVLWGASHHQPRSSSGSGSSAQPGAADRAAQRARGAALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRVAVDRSAQTXXXXXXXXXXXXXXXXXXXXXXQRPNTEGAVAAAVAAAVLSMASRFRDKCXXXXXXXXXXXXXXXXXXSDVEARAXXXXXHAQQQSQQLADAMSAVNQDRARAQLEMHDKLAEAQAQAQLTEATLRRDLERLKERARLAEQQXXXXXXXXXXXXXXXRARAAPQQRSILPARPPSSTSTSSSSTRSGGFLPLDISSFLPAVRLQPXXXXXXXXXXXXXXSTADSRLSEGQLDIPAGAHYSDGERVALTPRGRHVIEEGEWPRQHSHFPPXXXXXXXXXXRMVLAMGAYGSGRLRVRRRRPSARSGGGXXXXXXXXXXXXXXXXXXSPLSSPQGPSPQASASVDSYGTPVPWRLAARTAAACQDGSGASGASSRQSGXXXXXXXXXSCSSGDGSAPLAARGVLRLSASQRSGSXXXXXXXXXSTVDSPERRFVAAAARLGRQGDLEPGEILPS
Sbjct:    1 MTAEGWRGWETVGGVGMTSAAVIPRARQAHGLPPELRAIPLTAPAPEQYGAGKREVAVGGAGAXXXXXXXXQRTGATKGPPTGIGGAAALRRGREEVRQLAGTLEEVRREMAEHTRRLTFALQCCCRRCTYITCAXXXXXXXXXXXXXXXXLEQELARSRXXXXXXXXXXXXXXXXXXXXXXXXXEGAPSPSDRGSSGGGTRCGGKKEQESLQQCSKGSGSGGMRSGTANAYMSFCSAATASVIEEVEIEEEVDSEGEEAEGWYMVLEPTRRARVRDRVTVSDANFHAAADHVEVELLPQPRAAPDWGQDGPHGPPLSPPQGIEVEDEGGGVEVDTPVPGLGAPGLISVRGTGEAHLGGDATAGGARDLSLQAGRLGGGMGHGRLRLAGGDDDAEECVTLPMGVLLGPGRPRAQIARQWERMAEGLSRLSAAEQXXXXXXXXXXXXXXXXXXIPSAALSEERAQERHQAAPPLASEVLELVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQQQLLGDLQREALGARNRSEAEAGEAARVSAQLQLNAALERVAALEASLHQQLQLQHQPVVDAPPPPPREPSAERPAVPEPPVPEELSESVPPPPRPAFSTNFGRLLSGGRGWQRLPLEKGGSDDEEEETRADVAAESAELPESADALPSVDHVLWGASHHQPRSSSGSGSSAQPGAADRAAQRARGAALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRVAVDRSAQTXXXXXXXXXXXXXXXXXXXXXXQRPNTEGAVAAAVAAAVLSMASRFRDKCXXXXXXXXXXXXXXXXXXSDVEARAXXXXXHAQQQSQQLADAMSAVNQDRARAQLEMHDKLAEAQAQAQLTEATLRRDLERLKERARLAEQQXXXXXXXXXXXXXXXRARAAPQQRSILPARPPSSTSTSSSSTRSGGFLPLDISSFLPAVRLQPXXXXXXXXXXXXXXSTADSRLSEGQLDIPAGAHYSDGERVALTPRGRHVIEEGEWPRQHSHFPPXXXXXXXXXXRMVLAMGAYGSGRLRVRRRRPSARSGGGXXXXXXXXXXXXXXXXXXSPLSSPQGPSPQASASVDSYGTPVPWRLAARTAAACQDGSGASGASSRQSGXXXXXXXXXSCSSGDGSAPLAARGVLRLSASQRSGSXXXXXXXXXSTVDSPERRFVAAAARLGRQGDLEPGEILPS 1198

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353349 vs. uniprot

BLAST of jgi.p|Trimin1|353349 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CME3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..187
None	No IPR available	COILS	Coil	Coil	coord: 544..564
None	No IPR available	COILS	Coil	Coil	coord: 90..117
None	No IPR available	COILS	Coil	Coil	coord: 507..527
None	No IPR available	COILS	Coil	Coil	coord: 857..904
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1010..1027
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 571..775
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 991..1009
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 915..936
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 676..692
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 424..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 746..768
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 900..1198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1110..1138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1050..1090
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1151..1172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 947..967
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..615
None	No IPR available	PANTHER	PTHR48126	RE24507P	coord: 300..834

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_158	contig	Contig_158:265247..284127 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353349	mRNA_17404	Tribonema minus UTEX_B_3156	mRNA	Contig_158 265179..284127 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353349|estExt_Genemark1.C_Ctg_1580021 ID=Trimin1|353349|estExt_Genemark1.C_Ctg_1580021|Name=jgi.p|Trimin1|353349|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1199bp
MTAEGWRGWETVGGVGMTSAAVIPRARQAHGLPPELRAIPLTAPAPEQYG
AGKREVAVGGAGAEQYGAGKRQRTGATKGPPTGIGGAAALRRGREEVRQL
AGTLEEVRREMAEHTRRLTFALQCCCRRCTYITCAGTLEEVRREMAERTR
RLEQELARSRQQQQQEQQRQRQQQQEQEEQRQRLREGAPSPSDRGSSGGG
TRCGGKKEQESLQQCSKGSGSGGMRSGTANAYMSFCSAATASVIEEVEIE
EEVDSEGEEAEGWYMVLEPTRRARVRDRVTVSDANFHAAADHVEVELLPQ
PRAAPDWGQDGPHGPPLSPPQGIEVEDEGGGVEVDTPVPGLGAPGLISVR
GTGEAHLGGDATAGGARDLSLQAGRLGGGMGHGRLRLAGGDDDAEECVTL
PMGVLLGPGRPRAQIARQWERMAEGLSRLSAAEQPPPPPEEPPVAQESAA
PVIPSAALSEERAQERHQAAPPLASEVLELVREAATPLPSEVLELVREAA
APLPSEVLELVREVTRQQQLLGDLQREALGARNRSEAEAGEAARVSAQLQ
LNAALERVAALEASLHQQLQLQHQPVVDAPPPPPREPSAERPAVPEPPVP
EELSESVPPPPRPAFSTNFGRLLSGGRGWQRLPLEKGGSDDEEEETRADV
AAESAELPESADALPSVDHVLWGASHHQPRSSSGSGSSAQPGAADRAAQR
ARGAALLLQAQARADAAAAAAAAAAAQQQRAAAAWQRVAVDRSAQTEAPP
PPPPLLPPPPPLPAPPQRQRPNTEGAVAAAVAAAVLSMASRFRDKCGAVA
AAVAAAVLSMASRLSDVEARAAAAAAHAQQQSQQLADAMSAVNQDRARAQ
LEMHDKLAEAQAQAQLTEATLRRDLERLKERARLAEQQRDLERLKARARL
AEQRARAAPQQRSILPARPPSSTSTSSSSTRSGGFLPLDISSFLPAVRLQ
PPPPPPPMAPPPAPPSTADSRLSEGQLDIPAGAHYSDGERVALTPRGRHV
IEEGEWPRQHSHFPPPPPPPPLPPPRMVLAMGAYGSGRLRVRRRRPSARS
GGGSSGSSGRSSGGGSGSSSASPLSSPQGPSPQASASVDSYGTPVPWRLA
ARTAAACQDGSGASGASSRQSGGAGAHGARSSCSSGDGSAPLAARGVLRL
SASQRSGSSSSSGGSGSSTVDSPERRFVAAAARLGRQGDLEPGEILPS*