mRNA_17385 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353343
Unique Name	mRNA_17385
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353343 vs. uniprot
Match: A0A835ZAM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAM7_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 2.290e-132
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 2

Query:  143 MAPRCLCVLAAALCSLAGASDTDYFGGASSAHGLALHRLAESLRDLATTEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERRLDVNDTYFGGRDAAEQRDLWDDEHPEDSGDCAPTPEPSXXXXXXXXXXXXXXXXXASAPDVTTAPTSXXXXXXXXXXXXXXXXXXXXXXXARRLDDDDGETYFKTYFAEAALALGLGEHRDLTDDGSGDCTPTPEPAPSXXXXXXXXXXXXXAPFARRAEEESQDYFKEVAGSERRRATDSDSHSDSXXXXXXXXPSCADPIPIGADATGSPTXXXXXXXXXXXXXXXXXXXXXXXVLRRVLTGDEPYFND 1147
            MAPRCLCVLAAALCSLAGASDTDYFGGASSAHGLALHRLAESLRDLATTEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERRLDVNDTYFGGRDAAEQRDLWDDEHPEDSGDCAPTPEPSXXXXXXXXXXXXXXXXXASAPDVTTAPTSXXXXXXXXXXXXXXXXXXXXXXXARRLDDDDGETYFKTYFAEAALALGLGEHRDLTDDGSGDCTPTPEPAPSXXXXXXXXXXXXXAPFARRAEEESQDYFKEVAGSERRRATDSDSHSDSXXXXXXXXPSCADPIPIGADATGSPTXXXXXXXXXXXXXXXXXXXXXXXVLRRVLTGDEPYFND
Sbjct:    1 MAPRCLCVLAAALCSLAGASDTDYFGGASSAHGLALHRLAESLRDLATTEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERRLDVNDTYFGGRDAAEQRDLWDDEHPEDSGDCAPTPEPSXXXXXXXXXXXXXXXXXASAPDVTTAPTSXXXXXXXXXXXXXXXXXXXXXXXARRLDDDDGETYFKTYFAEAALALGLGEHRDLTDDGSGDCTPTPEPAPSXXXXXXXXXXXXXAPFARRAEEESQDYFKEVAGSERRRATDSDSHSDSXXXXXXXXPSCADPIPIGADATGSPTXXXXXXXXXXXXXXXXXXXXXXXVLRRVLTGDEPYFND 335

[Close]

BLAST of jgi.p|Trimin1|353343 vs. uniprot
Match: A0A835ZAD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD5_9STRA)

HSP 1 Score: 917 bits (2370), Expect = 0.000e+0
Identity = 545/545 (100.00%), Postives = 545/545 (100.00%), Query Frame = 1

Query:    1 MRPLTTQPEEQGLILAYLQSWAVNGGHLAVASARLLAAIGKTLARRLPLLWDNVVFEVAGLPEDLSAQLVLSQEPYAAQALACQALKEAGRWLGHWAVYSDLRRKACSFELGPVPGRVLSLPCAAPRPSWLSRLLSSGAGXXXXXXXXXXXXACAGGTCFVAVGAQRAPEILVQGAVARGLPLQCQAVSEPVLRRVRLPGLQEWAPEGLLLPVRVLASLAAVLIMLHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVAFARSAXXXXXXXXVALAXXXXXXXXXXXXGMAALLSAPLGAAAYAATIHRAAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSRGGGDACEDDAPERAWRVSQ 1635
            MRPLTTQPEEQGLILAYLQSWAVNGGHLAVASARLLAAIGKTLARRLPLLWDNVVFEVAGLPEDLSAQLVLSQEPYAAQALACQALKEAGRWLGHWAVYSDLRRKACSFELGPVPGRVLSLPCAAPRPSWLSRLLSSGAGXXXXXXXXXXXXACAGGTCFVAVGAQRAPEILVQGAVARGLPLQCQAVSEPVLRRVRLPGLQEWAPEGLLLPVRVLASLAAVLIMLHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVAFARSAXXXXXXXXVALAXXXXXXXXXXXXGMAALLSAPLGAAAYAATIHRAAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSRGGGDACEDDAPERAWRVSQ
Sbjct:    1 MRPLTTQPEEQGLILAYLQSWAVNGGHLAVASARLLAAIGKTLARRLPLLWDNVVFEVAGLPEDLSAQLVLSQEPYAAQALACQALKEAGRWLGHWAVYSDLRRKACSFELGPVPGRVLSLPCAAPRPSWLSRLLSSGAGXXXXXXXXXXXXACAGGTCFVAVGAQRAPEILVQGAVARGLPLQCQAVSEPVLRRVRLPGLQEWAPEGLLLPVRVLASLAAVLIMLHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVAFARSAXXXXXXXXVALAXXXXXXXXXXXXGMAALLSAPLGAAAYAATIHRAAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSRGGGDACEDDAPERAWRVSQ 545

[Close]

BLAST of jgi.p|Trimin1|353343 vs. uniprot
Match: D8LRC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC3_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.510e-9
Identity = 53/141 (37.59%), Postives = 70/141 (49.65%), Query Frame = 1

Query: 1063 LLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEG--GGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLR 1479
            L  V LAFW  G     W GK +FA S LAGVL TWR GL  E A+   G W    N QA ++R +T  G+ L+    +D +   A+   AL+    A+   R  +W ++        Q+   EYE QG +YT   IA LR
Sbjct:  440 LPGVMLAFWKMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTW---FNGQACIRRVLTFSGVFLVYNGVSDTDVGMALVVLALMAPTLAHYARRYNMWCNSSRWYRAGNQLSQEEYEAQGDAYTREAIAALR 577

[Close]

BLAST of jgi.p|Trimin1|353343 vs. uniprot
Match: A0A7S2AQW5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AQW5_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.670e-9
Identity = 55/184 (29.89%), Postives = 86/184 (46.74%), Query Frame = 1

Query: 1063 LLDVSLAFWHFG-------AFGVAWLGKLYFAGSALAGV-LVTWRWGLLR---EPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPH-CEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSR 1578
            L D+ L FWH G        + + WLGK YF   AL G+    WR G  R   +  E   W      Q  + + + ++ +  LL ST   E +  +    L   W   IW   RV +     +P+   QI  + YE Q + YT+A++++LRAY+Q +P    ++ P   + + +F +G  HV R
Sbjct:    2 LFDLLLTFWHKGLSPLGIVGWELPWLGKFYFTCGALTGLGFERWR-GCFRYSCDEFEDNNWNTGRCGQLYLLKGIRSMAVICLLHSTASFELSLLVV--LLACRWD-LIWHGFRVVHHKFNRSPYYASQISRSAYEEQSKEYTEAEVSRLRAYLQTDPEQMYRLDPQTQALVRNFSRGADHVVR 181

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353343 vs. uniprot
BLAST of jgi.p|Trimin1|353343 vs. uniprot

BLAST of jgi.p|Trimin1|353343 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZAM7_9STRA	2.290e-132	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

BLAST of jgi.p|Trimin1|353343 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835ZAD5_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LRC3_ECTSI	1.510e-9	37.59	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2AQW5_9STRA	3.670e-9	29.89	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_158	contig	Contig_158:21725..32047 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353343\|estExt_Genemark1.C_Ctg_1580002
Hectar predicted targeting category	signal peptide
TranscriptId	353665
Track	FilteredModels1
ProteinId	353343

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353343	gene_17385	Tribonema minus UTEX_B_3156	gene	Contig_158 21725..32047 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353343	Trimin1\|353343\|estExt_Genemark1.C_Ctg_1580002	Tribonema minus UTEX_B_3156	polypeptide	Contig_158 21867..31416 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17385_1	exon_17385_1	Tribonema minus UTEX_B_3156	exon	Contig_158 21725..22028 +
exon_17385_2	exon_17385_2	Tribonema minus UTEX_B_3156	exon	Contig_158 22636..22707 +
exon_17385_3	exon_17385_3	Tribonema minus UTEX_B_3156	exon	Contig_158 23933..24127 +
exon_17385_4	exon_17385_4	Tribonema minus UTEX_B_3156	exon	Contig_158 26489..26572 +
exon_17385_5	exon_17385_5	Tribonema minus UTEX_B_3156	exon	Contig_158 27524..27718 +
exon_17385_6	exon_17385_6	Tribonema minus UTEX_B_3156	exon	Contig_158 29725..29910 +
exon_17385_7	exon_17385_7	Tribonema minus UTEX_B_3156	exon	Contig_158 30761..30808 +
exon_17385_8	exon_17385_8	Tribonema minus UTEX_B_3156	exon	Contig_158 31351..32047 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_17385	UTR5_17385	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_158 21725..21866 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17385	CDS_17385	Tribonema minus UTEX_B_3156	CDS	Contig_158 21867..22028 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17385	UTR3_17385	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_158 31417..32047 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_158:21725..32047+
coding sequence from alignment at Contig_158:21725..32047+

spliced messenger RNA

>mRNA_17385 ID=mRNA_17385|Name=jgi.p|Trimin1|353343|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1781bp|location=Sequence derived from alignment at Contig_158:21725..32047+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCCGCTGGAGCAGGCGTGGGTGCGGGCACGTAGAGGTGGGGCTACTGGTT
GCAAGGCGCTGCGGAGGCAAAGACTGCCGAGCCTACTCAGCTCTCGATCT
GGTGCTCGCAGCTCGCATTCCTGAATCCGCAAAGTGACCACCATGGCACC
AAGATGTCTGTGCGTACTGGCTGCAGCGTTGTGTAGTCTGGCGGGCGCCA
GCGACACGGACTACTTTGGTGGCGCCAGCAGCGCTCACGGACTCGCTTTG
CATCGCCTCGCTGAGAGCTTGAGGGATCTAGCGACAACAGAGGCTCCCAC
TGCGGCACCGACGGCAGCGCCAACCAGTGCGCCAACCAATGCACCAACCA
GCGTACCTACCAGTGCACCCTCAGCGGCCCCCGCAGAGCGCCGCCTGGAC
GTCAACGACACCTACTTTGGGGGGCGCGATGCAGCGGAGCAGCGCGATCT
CTGGGACGACGAGCACCCTGAGGATTCTGGCGACTGCGCCCCCACCCCCG
AGCCGAGCTGTACCCCCGAGCCGGTCCCCTCGTGCGAACCTACGCCCCCG
CCGGAGACGGCCAGCGCTCCCGACGTTACGACTGCACCTACTTCAAGTCC
AACTTCAAGTCCGACCGTGGCGCCCACCAGTGCACCCTCCTCTGCGCCCT
CTGCGGCCCCCGCTGCGCGCCGCCTTGACGATGATGACGGCGAGACCTAC
TTCAAGACCTACTTCGCAGAGGCTGCCCTAGCGCTAGGGCTAGGCGAACA
CCGCGATCTCACCGACGACGGGTCTGGTGACTGCACCCCTACCCCCGAAC
CGGCCCCCTCGTGTGAGCCTACCCCCACTCCAGGGCCCGAGTACAGCCCT
GCCCCCTTTGCGCGGCGCGCGGAAGAAGAATCGCAAGACTACTTCAAGGA
AGTTGCGGGCAGCGAGCGGCGCCGCGCCACAGACTCCGACTCGCACTCAG
ACTCCCCCTCATGCGAGCCCACCCCCCAGCCCAGCTGCGCCGACCCGATT
CCCATAGGGGCAGACGCGACGGGGTCACCCACAGCGAGCCCGACGTCGGC
GCCGACCACATCCCCAACTTCAGCGCCCTCCGTGGCCCCCACAGCCATGC
CAGTGCTCCGCCGCGTCCTCACCGGCGATGAGCCCTACTTCAACGACTGA
TTCCAGAAACTTCAAGACTTGTGGCATCGCGCTTTTCCTACCGCGGAGGT
TGCCCTTTCCAACTTCAACACAGTTGTGCCCGTTTGGAGCATTACTCAAC
GCTCAGCAGTGCACCCCTTCACGCCTACCCCTCGCGTTAAGAACAATGCA
TGTTCCCGGGGGCTGCACCCCCTCGGTCTGTTTGTGAGAAGCGCTTGCGC
TAGGGCTTAACCCCAACCCTGAGGCTAGGGCTTGGGGGGCTGGCAGCGCG
CGCTCTGCGGTGTCTGCAACAACCCTAGATTTTTCTGGTTGCCCTACAGG
CGGCGGGGGGGGCTGTGAGTTAGGGTTAGCTAGCCCTAATGACGCGTGCG
CGCGCCGTGTGAACTTCACAATGTCCGTATGCACGGTTTTGATTGTGACT
ACGTGGCTGCGACAGCACGGCTAGGCGGCACCGGAGCAGCAGTGTTCAGC
AGCAGCAGCAGCAGCGCCTTTGTTGCTGTGTCTCATTGATGACTGTGTTT
TGTATGTGTCTTGTTGTGCAGTGTGATCGCGTGGCCTCTGCACGCGTGTC
GCCTGCCTACAGACCTACCCTGAATGTTGACCCTGCGCACACACTGCCCT
CTGTGCGACAATACAAGATTGTTGGTCCAGG

protein sequence of jgi.p|Trimin1|353343

>Trimin1|353343|estExt_Genemark1.C_Ctg_1580002 ID=Trimin1|353343|estExt_Genemark1.C_Ctg_1580002|Name=jgi.p|Trimin1|353343|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp
MAPRCLCVLAAALCSLAGASDTDYFGGASSAHGLALHRLAESLRDLATTE
APTAAPTAAPTSAPTNAPTSVPTSAPSAAPAERRLDVNDTYFGGRDAAEQ
RDLWDDEHPEDSGDCAPTPEPSCTPEPVPSCEPTPPPETASAPDVTTAPT
SSPTSSPTVAPTSAPSSAPSAAPAARRLDDDDGETYFKTYFAEAALALGL
GEHRDLTDDGSGDCTPTPEPAPSCEPTPTPGPEYSPAPFARRAEEESQDY
FKEVAGSERRRATDSDSHSDSPSCEPTPQPSCADPIPIGADATGSPTASP
TSAPTTSPTSAPSVAPTAMPVLRRVLTGDEPYFND*

mRNA from alignment at Contig_158:21725..32047+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17385 ID=mRNA_17385|Name=jgi.p|Trimin1|353343|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10323bp|location=Sequence derived from alignment at Contig_158:21725..32047+ (Tribonema minus UTEX_B_3156 )
GCCGCTGGAGCAGGCGTGGGTGCGGGCACGTAGAGGTGGGGCTACTGGTT
GCAAGGCGCTGCGGAGGCAAAGACTGCCGAGCCTACTCAGCTCTCGATCT
GGTGCTCGCAGCTCGCATTCCTGAATCCGCAAAGTGACCACCATGGCACC
AAGATGTCTGTGCGTACTGGCTGCAGCGTTGTGTAGTCTGGCGGGCGCCA
GCGACACGGACTACTTTGGTGGCGCCAGCAGCGCTCACGGACTCGCTTTG
CATCGCCTCGCTGAGAGCTTGAGGGATCTAGCGACAACAGAGGCTCCCAC
TGCGGTGAGTGCAACGTCGGTGGGGCACACGGTAGGCAGCGAGTTTGCAG
ACACAAGAAGCACGCACATTTGAGTATGCAGTTTGCTGGCGCGTGTTTAC
CTTAGCTATGCGGTATCCCGCAATTTCATGTCAAGAACACAGCTCTAGCG
CGAACTTGCGGAGAGCGGCATTTTTACCGGCAATGGCTTATATCGGCCTT
GAAGCTTCGTGCAGCAGCGGCACACGAGCATCTGTGGCTTGTGTCATGAT
ATTGTGTCGATCACGCTGCGTCACAGCTGCTGTAGCCAGCTGACAGCGCA
GGTGCCGGCCTGCCGGCAGTCCCTGGATGTTCCGTCTTATCGTGCTCACA
CACACACGGGTTTTTTGGTGCCCTACTTGGTGCGACAGTGGCTGAAAGGT
GCTTGGTGCTAGGGGCTTGATGTTTCACCTCCATGTTCAACAATCATTGT
CAAAGCAAAGCAGACAACAACATACTATCCTGCATTTTTTTTTCACGTGA
AGCTCTAGCCCTGCAATCTTACCGGGCGAAGTGGATATACAGCAGATTCT
GCGCCCGGATTGCATCGGCATCACTGCTCACAAATGTGTGGCATTGTGCC
GGCCTACGCAGGCACCGACGGCAGCGCCAACCAGTGCGCCAACCAATGCA
CCAACCAGCGTACCTACCAGTGCACCCTCAGCGGTAAGCGCCACCGTTAC
TCGCAGTTTTTTTAATTCGTCAACTCTTCGACCCTGTCACAATCGGCCCA
GCCCTTAAACCAGTAAGCGGCGCTGACACGCGCTATTGGTCACGCTAGAG
CACACTCACCCGCTTCCATTGATGTGCACAAAACCTGCCAACTCGACTTG
GTAACACCAATAAATAACCTGAGCTAACTGCCAGCTTGAGATAGAACTGC
TGCCACCGTGTTTTTCGTATGCTTGCACCCACCCCGTTTTTCACACATAT
GCTTCCACAAGGTGTCCTGCAGGCAGCAATGCTCAGCTGCACGGTGGGAC
GCTCTCGACACTGACTTCATATCTCGTACCGCATGCAGCTTTTTGTAGCT
ATCTGAACTCTTGAGCTCATGCTCGTCACATGGATATCAGACAGTGATGT
TGCCGATCGCGTTTGCCGACCCTCCTGCCGCTGCAGCATGTCAACCAGCA
TGCGCCGTGTCAAGCTGTCTTGTCAATGATTGCATACTCATTTTCAAAGT
ACACTGTGCATGCGAGCTTCACAGTGCGCTGGAGCAAACGCCTGAGAAAG
CACACACAGAGTCACTGAAAGAGCCGCTTGGCATGACGTGTACGATCGCA
TGCGCGGAGGGACAGGCACGGGATGTGACAGTGAGACAAACGGTAATGAA
TTTGGTATTGAATGACATGCTTCAATGTACACTTGGTAGGCCTGGCACAC
ATGTCGACAAAGGGCTTGATCACTTTGAGCATTGATTCAGGGCAGACAGA
AAGACGCAATGCTGTGCAACCTCAGGTGCTTGTGAGCCGAGGGAGCCTAA
AAGTCCTACAGCATCGTACGGATTATTCGTTTACAAAGGCGGTGGTGGAG
AGGGCGCAAGGCAGTGAGTGAGGCTCAGACAGCGGTCATGAAGGCGGTGA
TGATCAACAACTGTGAAGGGTATGTATGTAAGCCGTGCGCCGCTGTCCAG
CGCAAGCGCGCGCGACTGTCACTGCGTCACCCCAGAAAAGGCTGGTCTCT
TGAAGTATCAGAGTGAGAATTAGACTGAAGATGCGGCAAAGGCGGGGCTA
AGTGGTGCTGCCAAGCGCAGCAGCGACGGCGCCTACCCACACAGCGCGCT
GCAGCCTTGAAGTTGCGGTCTTTCCGCATCAGCAGAACCTCAACTCTAGT
TACAACCGGTGACTCACCCCTCACCCCCCCCCCCTCCCCATACTGAGCGC
CGCCGCAGGCCCCCGCAGAGCGCCGCCTGGACGTCAACGACACCTACTTT
GGGGGGCGCGATGCAGCGGAGCAGCGCGATCTCTGGGACGACGAGCACCC
TGAGGATTCTGGCGACTGCGCCCCCACCCCCGAGCCGAGCTGTACCCCCG
AGCCGGTCCCCTCGTGCGAACCTACGCCCCCGCCGGAGACGGCCAGCGCT
CCCGTGAGTACTTTATTTGCTTCCGCTTGAGGGGCGGACACCCTACAAAA
CACGCAAAATATGCAACTCGTGTACACATGTGCTGGTATGTTGCAGCTGT
ACTATTCGTTTCACAGTTCCCGACCCCACTTTTCTGGATTTTGCGCTAAA
ACACATCAGCGAGCGCGCCACTGTGACCTGATACAGCTTGCGACGCAGGA
GCAGTTGATCAGAGCCGTCTTAAGCAATTCCAAGGATGTGCTCATGATTA
GTCAGCCTATCAGAGGGCTGCACAGCGCGTGCTGTTTGTGGTGACTTGTG
CGCATTCCAGGCGAAAAGTGCCTTCACAAAACGGGGAGAAGCTAATGTCC
TCAACCATGCGCTGCCTCCGTGAGCGCTGCTAAGCAAAGTGGTAGCCTGC
CAGTGTGAAATCGGGACCATAGAAGCCGATTTTCAATTGGTGCTCATGGT
CAAAAGTTATCACTGTCGTCGCCAGCACCTCCGTCTCTGCGCGGTACTAA
ACGTTCGAAAATGAGCGCAAAAAAAAACAGCCCGAAACGACGCAGGAGGC
CTGAGCACAAACAACGACGCAGGAGAATAGGTACACCGCGCGATAACGAT
GGATCTCTCACGCTCTGCATATCTGTGTCATTAGGCTGAGACGTAGCGGT
GGCATCCCTCAAATTTGCGTGGAAATTCACCGAGTCGTTCGCGAGCAATG
GCTGCTTAAAAAATGGAGCGACTTTGAGCACAACAATGCAGAAGAATGGA
GATACCGCGCGATAGGGATGATCTCGGCACGCTCGCTGTATTTGTATACG
TAGGCTGACATGTGGCAATGGCAACCCACGAAATTGCATGCAAAACCATC
AGAGCGTTTGCAAGTTACGGCTGGTTGAAAATTGTGGACGGCAAATTTTT
AGTATAATGGAATAGTAGCTCACGAGTACCGCGGTTGTGTGATTGGGCCT
TTGGTCTGTGTGGTGTATGCTGTCGCTCTAGGCTTCTAGTGGTTTTGTGT
TGCGAGACTGCGCGGGTGCTTTCGTGCGCGTGTACAGTTTCAGTGTGCTC
GCCGTGCAGCATGAGCCTCACTATGATGACATAGGTAGGTAGGTATCATA
TCGTGTATGCTGCAGCGTCCTCAACTAGTTGCTCGAAAGGTGCAGTAGTT
TGCCTCGATGGTCGCGCATAGTGTGCGGTTGTTGTAGGCGCTGTGATGGT
GATAGGGTATGCTTACATCGCCGTTGGAGTATGATGTAGTATGTGTATGT
ATCATGCTGTGTGTGAGAGTTCTTACCCCCATGCATGGTCGTCCCACTAG
GCTGGAAGATCGTGACAGTCGCCATTGAGTGTTGTACGATGAATGGTCTC
GTGTGTCAGGCGCTGTCATGGCTATAGGTTGTGCTTACATCGCCGCTTGA
GGGAGGTATGTATGGAACAGGTATGTGGGTATCATGCGGTGTGCGAGGAC
CTACCCCCATGCATGGTCATTCCACCAGGGTTAACCTAGGATGAGGGTTA
CACGTTCACACTTGGACAAGCAGCTGAGGCCAATGCGCCTTGGCGATGCC
TTGATGGAAGCGTGCGCCACTGAACATTAGCGCCGCTTACATTCTACAAA
CTGCACCCCCCAATCATCGCTGTTAAGTGGTCAGCGCCACTTGCTACGCT
CCATGCACAATACCACAAAGGTGGACGAAATACCACCTGCATCAGATGGG
GGAGCGGGGCAAGGGCGATGACTTTTGCACAAGGAAAGCGGGTGATATGC
CTACATTACATACCCTATACCTGCTGAGCATCATCATAGCGCACGTGATG
TGCGTACATACCCTATGCTTGCTGAGCATCATCGTAGTGCGCTCATGCAA
CAGCGCATCTGCCGCACCGCACGCACCAACGCTGCGTCTCGCGGTTGAAA
TGGCACTTCTGCCTGCGCCACGCTCCCTGAGCAGCGCTGCACCATGCGCC
CTCGCTGAGCGCTGACACATAGTGAACTTCAACGGAGCTTGAATGAAGTG
AAGTTGTCCATGGTGTATCGTAGTCCACCATGCCTTCCGCAGTTGATTTG
TGCAGCCCACTTGTTTGCTCGTCTTGACACGCGGAAGTGTGTTCGTGCTC
ACCGAGTGCAGCACCAGCACCAACAGGGTCTGCGGCCGCGGCCCAGTGCA
GCAACGGAGGCGACGGCTGCGGTCAAGCGCCGCTGCGGCGGGGACGATTC
AACGCCGTGGCGGCCATGTACCTTCAAAAACATGCTTCAGTCTGCCCCCC
CCCCCCCCCCCCCCCCCCCCCCTTGCCGCGTGCTCTGTCACCACTGCCTG
TCATCTTGGAATTGACCTGATGTCTCACACTCGGACTCTCTTTCCGTTAT
TTTGCTGCTCCCAGGACGTTACGACTGCACCTACTTCAAGTCCAACTTCA
AGTCCGACCGTGGCGCCCACCAGTGCACCCTCCTCTGCGCCCTCTGCGGT
GAGCTCCACTTGCGCTTTATGATATCATGAGGTTGTTTGTGTGATGGCTG
ACATAGCCAATGCACGCGCTCTCAGGGGGACCTCTACGCACAAAGTATAA
CGAAAGTCGTAAGCAGCTGCAGCGTTGTGTGCATCTGTTCCCCTGCGTGC
ACCGCCACCTCTGCAATGAAAAGCGTGCCGAACTGACAGATTAAGCCGGC
GGCGATCATGATGAGGTTCGCCCGCTCAGCAGTCAGGTGCAGCATTGTTT
GCGGAGTTAAGTGCGCTCCACGTTTAGGTGGGCGTAGGGGGAGCTTCACT
GCAGAGTTTTGGTGGGGTGAACACTTTCTTTACTAAGCCCCCCCCGCACC
CCCTTTCCCCTAGTGTCTACTGGTGTGATCGGCAGCCTACTGTTCTACAC
GCCTCACCTGCAATGGCCAGCGATCTTATGTGCACTCTGCTGGACTTGCA
CACACTACCACGGGCATGTGCCCGCCCGCACACAAGCTGTGATGACATGA
ACGTTTCATATATAGATGCAGAAGTGGCCTTTGCGTGGCAGAGCCACAAT
GTGCGCTTGGCCTTACGGCCCTGACACCCCATTCATGCTTCTCGCTGGGA
CACCCGCCGCTGACTTGTACAACGCGCGATTCACAGCAGCAACAGCAGCG
CTGCTCGACACAGATGCCGCTGATATCCGCGCATACGCGCTGCAAATCGT
CACGCGGGCCCGCCGCTCCGCACACTAAACTTCAAAACCAAAGTTCAACA
AAAGTAGCAGCCCCGCTCGATGCAGAAGCACCCCTTGCGTGCCAAGCGCG
CCCGCCCCAAGTGCTCACAAATACCCCCCAAATGTGGCAGCCCCGCTCGA
TGCAGAAGCAATCCTTGCGTGCCAAGCGCCCCCGCCCAGATAGCTCTTTG
AAAAAGAAAACCTTTTTTTGTGCTACCCCCCGACTGAGCGCTGCCGCAGG
CCCCCGCTGCGCGCCGCCTTGACGATGATGACGGCGAGACCTACTTCAAG
ACCTACTTCGCAGAGGCTGCCCTAGCGCTAGGGCTAGGCGAACACCGCGA
TCTCACCGACGACGGGTCTGGTGACTGCACCCCTACCCCCGAACCGGCCC
CCTCGTGTGAGCCTACCCCCACTCCAGGGCCCGAGTACAGCCCTGTAAGT
GCAAAGAGGGGCACATATTGTGCATCTGGCGTGCTGCAGTGTGTGTGTGT
GTCTGTGGCCCTTCTCGCCTGATCTCGAGAGCAGTCGAGTCGATCGTGCG
CGAATAAATGGGTGTCAGTTAGCGTTGCTGTGCGCGGCGGGTTTGCGTGT
GAGTCTGTGCTGTTGTCCACTTGATCTCAAGAGCAGCCGAGTCGAGCGTG
CGGGAACGAAAATGGGGTTGAGTCCGTGCTGCTGTGTCAATCGGACCTCG
TGTCCAGTGGCGCAACATGTGTTATAGTCAGCGCTTTCCTCAGCGGGGTC
CAGAGTGTGCGTTTGAGTGCGCGAGATGGGCGGCGTGTCCGCCTCGCGAT
TGAAATTTGCGGTGATGTTGAAGATCGTGGCACATGCGCTTGTGAAGCAC
ACACCGCAGAGCGTTGACATCGTGCCAGGGTAGTGGGCCATGCCATATCC
CACCCTCAATGAGTGAATGCAGGGGGTAATAGATCTGCTGAGCACTGCTG
CAGGTGACACAACCCCCTGAAGACCTCTGTCCTGCCCCACGACATTTGTT
TGTCATAGGTCAAGTGACGGTATCAAATAATGGGTTGGGATTCTGCTGGC
GACTTGCACTTCAAAACACGATCGCACCAAAACTCTTTTCATATGCCATG
AACTTCCCAAATGGCATGTGCCCCCCACTGCACAGAGCAGCGAGCATCGT
GCGGCGCAAGCAGCTTCGGGAGGGGCAGCCAGCATCCGCCCATGTTAATT
GATGATAACTCACTTTCAGTGTCACTGAATGAGCTGCCAGGACTTGCAAC
GCGCTGTCGCTGACATTGCGCGCATTGCTGCTGCGTGTGTGTCCAGGACG
CCGTCCCAACTTCAAGTCCTACTTCAAGTCCTACTTCAAGCCCCACCACC
GCGCCAACTTCCGCGCCGACCACCGCACCAACGGGATCTCCGACCACGGT
ACGCCCCTGCTGCCCCCCCCCCCCCCCTCCCCTTGTACCATATGTACACC
AACGCTTCCAGGATTTTCATTCTCGATTTCGTGAGAAGGTCATTTGATGC
TAACATGGATGACAGAGCAGCATGGCACAGAGCTGCCCGCTTTTAGTGCC
CACTGGCTCGCACGTGGCAAATGCCGGCGCGGCGCTTCTGTGCTTTCGTT
CGTTGCGATCCAGCCGTTCAGGCACTTGTGTGCTCTTCTTCTTTGGTATA
TACTATCCAGCCATTCCGGCACGTAGGCAATATACTGAGCTTAAGATCGC
GGCTTGAACGCAGCACTGAGGCAAAGCGCCGTTAGACTGATGCACTCATG
ACCTGAAGCCACAAAGTCATCTCCAGTGTTTTACTACAGTCGCTGCAGAC
CTTAGGTTTAAAATTAGGGTTAGGGTCCTTTGGTTTGGTTTAGGGCCCTG
CACCTCTGTGTTTTGCTGCAGTCCCTGTACCTTAGGGTATAGGCTAGGGT
TAAAGTGAGGGCCCTGCACCTTTGACGTTTCATCATCGCCTGCGCCGTGG
TCAGATAACAGCGCTGCACTCACCGATGGCTAGGTTTAGGGTTAAGGTCA
GGACTACAGTTAGGGTTAGGGTTTACGGTCAGAATTAGGGCAGCAGCGAA
GGGTACGGGTTAGGGTTAGGCGACTGTTCAATAACCTCAACTTCATCGCC
AGGCCCACCTGATGTCCCTCCTCCTGCCAACCTCCGTGCATGCCTCTTTC
ACATAGCGCGTGCAGCGGTGGTGAATCATGTAGGAGGGAAATGGTCTTGG
AAAAGCCTGTGACACAAAGCAGCACAACAGTTGAACATGGAAACAAATCA
CAAGATCGTAGAGCTCTAGGTGACAAAGTGTGGTAAGTCGCAAAAGCCTT
TCACTTATAAGTGGTCGCCGCTGCTGCGTCAATTGGCCACAAGTCAAACA
GTGCCATCATATCCACAGGAGCCAAAAGGCTTCAGTGAGCAAGCTTTTTA
GCTTCCGAGTCAGTGAAACTCACGCAGAATGCCTTTGCTGAGCGCTGCAG
GCCCCCTTTGCGCGGCGCGCGGAAGAAGAATCGCAAGACTACTTCAAGGA
AGTTGCGGGCAGCGAGCGGCGCCGCGCCACAGACTCCGACTCGCACTCAG
ACTCCCCCTCATGCGAGCCCACCCCCCAGCCCAGCTGCGCCGACCCGATT
CCCATAGGGGCAGACGCGACGGGGTCACCCACAGCGGTATGTATGTATAG
TGCAATAAGGTTAGGGTTAGGATCGGTAATTAAGTGTTCTCTAGCCCTGG
TGTTCGTTTAGCGGTATGGCCCAGTCTATAGACGACTGCCAATTCTTAGT
CGGGACGGGGCCTTTGGTCGCATACGGTTGAGGCTGTGTCTCAGTAGGTA
TTGTGCGATAGGATGAGGGTTAGGGCTGGTGTTGGTGCTTCAATGGTATT
GGTGTTTCAGACGGTTGAGGGTTCGGGGCGGGAGCGATTTATGCCTTTGC
GGCTGGTGCAACGAAGCGACCGTGATGCGTCGACCGAGCATTCTGCTGCT
TTCTGTTGGCGTGCAAGTACGCACCCCTCCGACACACGTGCAGGGACCCC
TTTGGTGATGGAGTGCCAGGGTCGCGTGCTGTACTCGTATTGACCTGTAC
AGTTGTACCTGTAGAATCGTGTGCAGCGTGCACGCGTGGCGGATTGAGTC
ACCTGCGCATGCGGGCTTGTCACCTTCCTCCGCCCACCGGCCACTGTGTA
TGTCATTCGTGCGGCCTGTGCCCAAGCAGGGTCGCTACTGTTTCAGACCA
AGTTTGCTACTTTAGAACTTGAAGTGCTGCTCTGTCTTGTTTCTTTACCG
CACCCATGTGATCAGCGCTGGACGACCTTGCTGCTGCACTGCTCCGAGGT
GCCTCGTGCCGCTGAGCTCATGTGTTTGAACTACTGTTGTCAACTACTTC
AACTTGAAGTTGAAGTGGTCAGGGTCACTACCCGCTGCGCGGTGCATGCC
TGCGTGGCCATTGGAATTAGCTGTATGTGCGCTGCACCGCTCATCTGCGA
CTGCTTGCGCTGCTGCATGCGTTTGCGTCCCTTCAGAGCCCGACGTCGGC
GCCGACCACATCCCCAACTTCAGCGCCCTCCGTGGTAAGATGCCGCGATC
TGACTGAGCCACTTGCAACCACTGATTATGTAAACGAGCACCTGGTCTGC
TCTTGTAGCATGGCTGCTCTTGTAGCAAGTGTCACTCGGATCATGTGGCT
TTCTTTGCAGCTCGAGCGAGCATCACCAGCAAGTGCCTGCAAGCCTGCGC
AAGTCTGCAAGAGGACCATGGGTCACGCAAGTACCTGCAAGTCCTCTATA
TTTGCGTGAAGGACCATGGTGGTCACGCCTTCATGGTTTCTGCACCTGTA
AGGATGTGCCCCATTCAACATCATGCTGTAGGGTAAGGGTTAGGGTTAGG
GTGTGGTCACCGACTCGTACAGACAATTGGCGTAAGTTGCGTGCGTGTTG
TGTAGGTTTTGCATTCCATTTAGCAAATGCTCAATGTGTTTCTAGAGTTT
ACATCCCATGCAGCAACTGCGCCTGCACTGTGCTTCAAGAGCTTGTCCAC
TGATACTGCAAACCTTATAATAAATCACGACGTTCACGTATCTGTTTTCT
CCCCTCTCCCCCCCCCCCCCAAACAGGCCCCCACAGCCATGCCAGTGCTC
CGCCGCGTCCTCACCGGCGATGAGCCCTACTTCAACGACTGATTCCAGAA
ACTTCAAGACTTGTGGCATCGCGCTTTTCCTACCGCGGAGGTTGCCCTTT
CCAACTTCAACACAGTTGTGCCCGTTTGGAGCATTACTCAACGCTCAGCA
GTGCACCCCTTCACGCCTACCCCTCGCGTTAAGAACAATGCATGTTCCCG
GGGGCTGCACCCCCTCGGTCTGTTTGTGAGAAGCGCTTGCGCTAGGGCTT
AACCCCAACCCTGAGGCTAGGGCTTGGGGGGCTGGCAGCGCGCGCTCTGC
GGTGTCTGCAACAACCCTAGATTTTTCTGGTTGCCCTACAGGCGGCGGGG
GGGGCTGTGAGTTAGGGTTAGCTAGCCCTAATGACGCGTGCGCGCGCCGT
GTGAACTTCACAATGTCCGTATGCACGGTTTTGATTGTGACTACGTGGCT
GCGACAGCACGGCTAGGCGGCACCGGAGCAGCAGTGTTCAGCAGCAGCAG
CAGCAGCGCCTTTGTTGCTGTGTCTCATTGATGACTGTGTTTTGTATGTG
TCTTGTTGTGCAGTGTGATCGCGTGGCCTCTGCACGCGTGTCGCCTGCCT
ACAGACCTACCCTGAATGTTGACCCTGCGCACACACTGCCCTCTGTGCGA
CAATACAAGATTGTTGGTCCAGG

Coding sequence (CDS) from alignment at Contig_158:21725..32047+

>mRNA_17385 ID=mRNA_17385|Name=jgi.p|Trimin1|353343|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_158:21725..32047+ (Tribonema minus UTEX_B_3156 )
ATGGCACCAAGATGTCTGTGCGTACTGGCTGCAGCGTTGTGTAGTCTGGC
GGGCGCCAGCGACACGGACTACTTTGGTGGCGCCAGCAGCGCTCACGGAC
TCGCTTTGCATCGCCTCGCTGAGAGCTTGAGGGATCTAGCGACAACAGAG
GCTCCCACTGCGGCACCGACGGCAGCGCCAACCAGTGCGCCAACCAATGC
ACCAACCAGCGTACCTACCAGTGCACCCTCAGCGGCCCCCGCAGAGCGCC
GCCTGGACGTCAACGACACCTACTTTGGGGGGCGCGATGCAGCGGAGCAG
CGCGATCTCTGGGACGACGAGCACCCTGAGGATTCTGGCGACTGCGCCCC
CACCCCCGAGCCGAGCTGTACCCCCGAGCCGGTCCCCTCGTGCGAACCTA
CGCCCCCGCCGGAGACGGCCAGCGCTCCCGACGTTACGACTGCACCTACT
TCAAGTCCAACTTCAAGTCCGACCGTGGCGCCCACCAGTGCACCCTCCTC
TGCGCCCTCTGCGGCCCCCGCTGCGCGCCGCCTTGACGATGATGACGGCG
AGACCTACTTCAAGACCTACTTCGCAGAGGCTGCCCTAGCGCTAGGGCTA
GGCGAACACCGCGATCTCACCGACGACGGGTCTGGTGACTGCACCCCTAC
CCCCGAACCGGCCCCCTCGTGTGAGCCTACCCCCACTCCAGGGCCCGAGT
ACAGCCCTGCCCCCTTTGCGCGGCGCGCGGAAGAAGAATCGCAAGACTAC
TTCAAGGAAGTTGCGGGCAGCGAGCGGCGCCGCGCCACAGACTCCGACTC
GCACTCAGACTCCCCCTCATGCGAGCCCACCCCCCAGCCCAGCTGCGCCG
ACCCGATTCCCATAGGGGCAGACGCGACGGGGTCACCCACAGCGAGCCCG
ACGTCGGCGCCGACCACATCCCCAACTTCAGCGCCCTCCGTGGCCCCCAC
AGCCATGCCAGTGCTCCGCCGCGTCCTCACCGGCGATGAGCCCTACTTCA
ACGACTGA