mRNA_14829 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353326
Unique NamemRNA_14829
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A0A836CMG9_9STRA (Sorbitol dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG9_9STRA)

HSP 1 Score: 704 bits (1818), Expect = 3.890e-256
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 1
Query:    1 MAGKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTEETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIKADAGKSA 1080
            MAGKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTEETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIKADAGKSA
Sbjct:    1 MAGKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTEETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIKADAGKSA 360          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A0A6H5KC18_9PHAE (PKS_ER domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC18_9PHAE)

HSP 1 Score: 465 bits (1197), Expect = 2.050e-161
Identity = 228/362 (62.98%), Postives = 282/362 (77.90%), Query Frame = 1
Query:    7 GKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTEETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIKA------DAGK 1074
            G DNMAAWL+GVDDLRV+PH   +D+PL  N+VRV+VGA+GICGSDVHYLKHMR  DFVV +PM+IGHE+AG++ E+G  V+       VA+EPG+PCR C  CK G YNLCE+MEF ATPPVHGSLA FV HP+DFC+ LPDGM+LEEGAMCEPVSVG+HAC+R+GV PG  +A+LGAGPIGL++++VA+AFGA  +V+TD+SDERL VAK LGA   +NV  L+  E   ++    GGR+P    DCCGF SS++ ALA   SGGKVCL+GMGH  M+LP+TASAAREVD++GVFRYR+AYP AI L+    IDVQPLIT+RF+L   F+ + I EGF+VSA+G +AIK       DAGK
Sbjct:    6 GSDNMAAWLHGVDDLRVEPHPTEVDKPLGPNDVRVRVGAVGICGSDVHYLKHMRCADFVVKQPMVIGHEAAGVVAEVGSAVRGLACGDPVALEPGVPCRLCEHCKTGSYNLCEKMEFHATPPVHGSLARFVTHPSDFCYKLPDGMSLEEGAMCEPVSVGVHACRRAGV-PGQKVAILGAGPIGLLSMMVARAFGAAVVVVTDVSDERLKVAKELGADVAVNVKGLSPAEAAAKVVGD-GGRRPDACVDCCGFESSVSTALAAAKSGGKVCLVGMGHIMMSLPITASAAREVDLVGVFRYRDAYPTAIHLVGSGAIDVQPLITHRFSLATNFTSDTINEGFKVSARGGDAIKVMFNLVEDAGK 365          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A0A1Y1HSP0_KLENI (Sorbitol dehydrogenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSP0_KLENI)

HSP 1 Score: 419 bits (1077), Expect = 1.780e-143
Identity = 214/355 (60.28%), Postives = 262/355 (73.80%), Query Frame = 1
Query:    1 MAGKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLT--TEETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            M+  +N AAWLYGVDDLR+ P        L A +VRV+V A+GICGSDVHYLK M    FVV  PM+IGHESAG+++E+G  VK      RVAMEPGI C  C  CKEG YNLCEEM+FFATPPVHGSLAN V+HPAD CF LPD ++LE+GAMCEP+SV +HAC+R+ + PG  +AV+GAGPIGLV+LLVAKAFGA+ I +TD+ D RL +AK LGA A + V+N     E   +++   LGG K  VT DC GFT +M  ALA T SGG+VCL+GMGH EMTLPLT +AAREVD++GVFRYRN YPL I+L+  + +DV+PLIT+RF    GFS   +K+ F+ SAKG  AIK
Sbjct:    1 MSPPENQAAWLYGVDDLRILPFTL---PDLGAKDVRVRVKAVGICGSDVHYLKKMECAGFVVESPMVIGHESAGIVSEVGTSVKHLKVGDRVAMEPGIACNTCTACKEGRYNLCEEMKFFATPPVHGSLANEVIHPADLCFKLPDSVSLEDGAMCEPLSVAVHACRRAEIAPGKSIAVMGAGPIGLVSLLVAKAFGASKIAVTDVDDSRLAMAKQLGAHAVVKVSNKMEDVEAEAEKLRSVLGG-KVDVTLDCAGFTKTMQTALAATKSGGRVCLVGMGHTEMTLPLTPAAAREVDVVGVFRYRNTYPLCIELLESKLVDVKPLITHRF----GFSDADVKKAFDTSAKGGEAIK 347          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A0A0K9QY45_SPIOL (PKS_ER domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QY45_SPIOL)

HSP 1 Score: 409 bits (1051), Expect = 2.230e-139
Identity = 212/356 (59.55%), Postives = 266/356 (74.72%), Query Frame = 1
Query:    7 GKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTE-----ETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            G+ NMAAWL G++ L++QP       PL  ++VR+++ A+GICGSDVHYLK++R  DF+V EPM+IGHE AG+I EIG  VK      RVA+EPGI C  CH CK+G YNLC EM+FFATPPVHGSLAN VVHPAD CF LPD ++LEEGAMCEP+SVGIHAC+R+ V P T   ++GAGPIGLVTLL A+AFGA  IV+ D+ D RL+VAK LGA    +V  +TT+     +   RI EA+G R  +VT DC GF  +M+ AL+ T +GGKVCLIGMGHG MT+PLT +AAREVD++GVFRY+N +PL +D IS   IDV+PLIT+RF    GFSQ+ ++E FE SA+G +AIK
Sbjct:   13 GEKNMAAWLTGINTLKIQPFEL---PPLGPHDVRIKMKAVGICGSDVHYLKNLRCADFIVKEPMVIGHECAGIIEEIGTDVKSLVPGDRVALEPGISCWRCHQCKDGSYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGIHACRRAKVDPETTTLIMGAGPIGLVTLLAARAFGAPRIVVVDVDDYRLSVAKQLGAD---DVVKVTTDMQDIPDEVARIHEAMG-RPVNVTFDCAGFNKTMSTALSATGAGGKVCLIGMGHGVMTVPLTPAAAREVDVVGVFRYKNTWPLCLDFISSGKIDVKPLITHRF----GFSQKEVEEAFETSARGGDAIK 357          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A0A2G5CTE0_AQUCA (PKS_ER domain-containing protein n=5 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CTE0_AQUCA)

HSP 1 Score: 406 bits (1043), Expect = 3.410e-138
Identity = 208/350 (59.43%), Postives = 262/350 (74.86%), Query Frame = 1
Query:   16 NMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTEETCK--RITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            NMAAWL+GV+DLR+QP      QPL   +V++++ A+GICGSDVHYLKHMR GDFVV EPM+IGHE AG++ E+G  VK      RVAMEPGI C  C  CK G YNLC +M+FFATPP+HGSLA+ VVHPAD CF LP+ M+LEEGAMCEP+SVG+HAC+R+ V   T + +LGAGPIGLVT+L A+AFGA  IV+ D+   RL+VAK LGA A + V+  T + + +  +I EA+G     +T DC GF+ +M  AL  T SGGKVCL+GMGH EM +PLT +AAREVDI+G+FRY+N +PL IDLIS   IDV+PLIT+RF    GFSQ+ +++ FE SAKG +AIK
Sbjct:   14 NMAAWLFGVNDLRIQPFKL---QPLGPTDVKIRMKAVGICGSDVHYLKHMRCGDFVVKEPMVIGHECAGVVEEVGSDVKSLVVGDRVAMEPGISCWHCFHCKGGSYNLCPDMKFFATPPIHGSLADQVVHPADLCFKLPENMSLEEGAMCEPLSVGVHACRRANVGAETTVLILGAGPIGLVTMLTARAFGAPKIVLVDVDSHRLSVAKKLGADATVQVSTNTEDVSNEVAQIQEAMGVGI-DLTFDCVGFSKTMTTALTATTSGGKVCLVGMGHNEMKVPLTPAAAREVDIVGIFRYKNTWPLCIDLISSGKIDVKPLITHRF----GFSQDEVEKAFETSAKGSDAIK 355          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A0A834YC54_9MAGN (PKS_ER domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YC54_9MAGN)

HSP 1 Score: 406 bits (1043), Expect = 3.410e-138
Identity = 206/354 (58.19%), Postives = 269/354 (75.99%), Query Frame = 1
Query:    7 GKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTEETCK---RITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            G++NMAAWL  V+ L++QP       PL  ++VRV++ A+GICGSDVHYLK MR GDF+V +PM+IGHESAG+I E+G  V+      RVA+EPGI C  C+LCK+G YNLC EM+FFATPPVHGSLAN VVHPA+ CF LPD ++LEEGAMCEP+SVG+HAC+R+ V P T + ++GAGPIGLVT+L A+AFGA  IVI D+ D RL+VAK LGA   + V++   ++ C+   +I +A+G     VT DC GF  +M+ AL  T++GGKVCL+GMGH EMTLPLTA+AAREVD++G+FRY+N +PL ++ +S   IDV+PLIT+RF    GFSQ+ ++E FE SA+G NAIK
Sbjct:   11 GEENMAAWLVAVNTLKIQPFKL---PPLGPHDVRVRMKAVGICGSDVHYLKAMRCGDFIVKQPMVIGHESAGIIDEVGSEVRSVVVGDRVALEPGISCWRCNLCKDGRYNLCPEMKFFATPPVHGSLANQVVHPANLCFKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVLIMGAGPIGLVTMLSARAFGAPRIVIVDVDDHRLSVAKELGANEIVKVSS-NIQDVCEEAVQINKAMG-TGVDVTFDCAGFNKTMSTALRATSAGGKVCLVGMGHDEMTLPLTAAAAREVDVIGIFRYKNTWPLCLEFLSSGKIDVKPLITHRF----GFSQKDVEEAFETSARGGNAIK 355          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A9RYI0_PHYPA (Predicted protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9RYI0_PHYPA)

HSP 1 Score: 405 bits (1040), Expect = 1.330e-137
Identity = 208/354 (58.76%), Postives = 262/354 (74.01%), Query Frame = 1
Query:    4 AGKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACI--NVANLTTEETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            +G  NMAAW+ G +DL+VQP++  L   L  +EV+V + A+GICGSDVHY +H++ GDF+V EPM+IGHE AG I E+G  VK      RVA+EPGI C  C LCK+G YNLC +MEFFATPPVHGSLAN V+HPAD CF LP+ ++LEEGAMCEP+SVG+HAC+R+ V P T + +LGAGPIGLVTLL A AFG+ ++VI DIS ERL VAK LGA A +  + ++   E     + +A+G     VT DC GFT SM  AL  T +GG+VCL+GMGH EMTLPLT +AAREVDILGVFRYRN YPL +DLIS   ++V+PLIT+RF    GF+Q+ + + FE SAKG ++IK
Sbjct:   18 SGGQNMAAWVCGKNDLKVQPYN--LPPVLGDHEVKVGIKAVGICGSDVHYYRHLQCGDFIVKEPMVIGHECAGTIEEVGKAVKNVAVGDRVALEPGIACNKCKLCKQGFYNLCPDMEFFATPPVHGSLANHVIHPADMCFKLPENVSLEEGAMCEPLSVGVHACQRATVGPTTKVLILGAGPIGLVTLLAAHAFGSPTVVIADISPERLKVAKELGANATVVLSTSDNEVESEVLALQKAMGA-DIDVTIDCVGFTKSMKTALKATRAGGRVCLVGMGHNEMTLPLTPAAAREVDILGVFRYRNTYPLCLDLISSGRVNVKPLITHRF----GFNQKDVVDAFETSAKGGSSIK 364          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: UPI001C4FE6A6 (sorbitol dehydrogenase-like n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001C4FE6A6)

HSP 1 Score: 403 bits (1036), Expect = 4.220e-137
Identity = 204/353 (57.79%), Postives = 266/353 (75.35%), Query Frame = 1
Query:    7 GKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVAN--LTTEETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            G++NMAAWL G+++L+VQP       P+  ++VRV++ A+GICGSDVHYLK MR GDF++ EPM+IGHESAG+I E+G  VK      RVA+EPGI C  C LCKEG YNLC EM+FFATPPVHGSLA+ +VHPAD CF LP+ ++LEEGAMCEP+SVG+HAC+R+ + P T + ++GAGPIGLVT+L A+AFGA  IVI D+ D+RL+VAK LGA   + V++    T E   +I +A+G     VT DC GF  +M+ AL+ T +GGKVCL+GMGH EMT+PLT +AAREVDI+G+FRY+N +PL ++ +    IDV+PLIT+RF    GFSQ+ ++E FE SA G NAIK
Sbjct:   13 GEENMAAWLLGINNLKVQPFKL---PPVGPHDVRVRIKAVGICGSDVHYLKTMRCGDFILKEPMVIGHESAGIIEEVGSEVKHVVVGDRVALEPGISCWRCDLCKEGRYNLCPEMKFFATPPVHGSLADQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVHDDRLSVAKNLGADEILKVSHNIQDTAEEVVQINKAMGAGV-DVTFDCAGFDKTMSTALSATRAGGKVCLVGMGHSEMTVPLTPAAAREVDIIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRF----GFSQKEVEEAFEASAGGGNAIK 357          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: D7TMY3_VITVI (PKS_ER domain-containing protein n=6 Tax=Vitis TaxID=3603 RepID=D7TMY3_VITVI)

HSP 1 Score: 402 bits (1034), Expect = 9.410e-137
Identity = 205/353 (58.07%), Postives = 265/353 (75.07%), Query Frame = 1
Query:    7 GKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTE--ETCKRITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            G++NMAAWL GV++L++QP    +  PL  ++VRV++ A+GICGSDVHYLK +R  DF+V EPM+IGHE AG+I E+GP VK      RVA+EPGI C  C LCKEG YNLC EM+FFATPPVHGSLAN VVHPAD CF LPD ++LEEGAMCEP+SVG+HAC+R+ + P + + V+GAGPIGLVT+L A+AFGA  IVI D+ D RL+VAK LGA   + V+    +  E   +I +A+G R   V+ DC GF  +M+ AL+ T++GGKVCL+GMGH EMT+PLT +AAREVD++GVFRY+N +P+ I+ +    IDV+PLIT+RF    GFSQ  ++E FE SA+G  AIK
Sbjct:   16 GEENMAAWLLGVNNLKIQPF---ILPPLGPHDVRVRMKAVGICGSDVHYLKKLRCADFIVKEPMVIGHECAGIIDEVGPQVKSLVPGDRVALEPGISCWRCQLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRADIGPESNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNIQDVAEEVVQIHKAMGARV-DVSFDCAGFDKTMSTALSATSTGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYKNTWPICIEFLRSVKIDVKPLITHRF----GFSQREVEEAFETSARGGTAIK 360          
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Match: A0A328D298_9ASTE (PKS_ER domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328D298_9ASTE)

HSP 1 Score: 402 bits (1032), Expect = 1.300e-136
Identity = 203/353 (57.51%), Postives = 259/353 (73.37%), Query Frame = 1
Query:    7 GKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVHYLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKXXXXXXRVAMEPGIPCRCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLEEGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSIVITDISDERLTVAKALGATACINVANLTTEETCK--RITEALGGRKPHVTADCCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFRYRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRNAIK 1059
            G++N+AAWL GV+D+++QP H     PL  ++VRV++ A+GICGSDVHYLKHMR   ++V EPM+IGHE AG+I E+G GV+      RVA+EPGI C  C  CKEG YNLC EM+FFATPPVHGSLAN VVHPA  CF LPD ++LEEGAMCEP+SVG+HAC+R+ + P T + V+GAGPIGLVT+L A+AFGA  I++ D+   RL+VA+ LGA   I V++   +   +  +I EA G     V+ DC GF  +M  AL  T SGGKVCLIGMGH  MT+PL A+AAREVD++GVFRY+N +PL I+L+    IDV+PLIT+RF    GFSQ  ++E FE SA+G NAIK
Sbjct:    5 GEENLAAWLVGVNDIKIQPFHL---PPLGPHDVRVRIKAVGICGSDVHYLKHMRCAGYIVKEPMVIGHECAGIIEEVGSGVETLFPGDRVALEPGISCWRCDFCKEGRYNLCPEMKFFATPPVHGSLANHVVHPAHLCFKLPDDLSLEEGAMCEPLSVGVHACRRASIGPETRVLVMGAGPIGLVTMLAARAFGAPKIILADVDQARLSVARELGADEVIKVSSNIQDAAAEIEKIKEATGAGI-DVSFDCAGFDKTMTTALGATRSGGKVCLIGMGHEHMTIPLAATAAREVDVIGVFRYKNTWPLCIELMRSGKIDVKPLITHRF----GFSQREVEEAFEASARGGNAIK 349          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353326 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMG9_9STRA3.890e-256100.00Sorbitol dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
A0A6H5KC18_9PHAE2.050e-16162.98PKS_ER domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A1Y1HSP0_KLENI1.780e-14360.28Sorbitol dehydrogenase n=1 Tax=Klebsormidium niten... [more]
A0A0K9QY45_SPIOL2.230e-13959.55PKS_ER domain-containing protein n=1 Tax=Spinacia ... [more]
A0A2G5CTE0_AQUCA3.410e-13859.43PKS_ER domain-containing protein n=5 Tax=Thalictro... [more]
A0A834YC54_9MAGN3.410e-13858.19PKS_ER domain-containing protein n=1 Tax=Tetracent... [more]
A9RYI0_PHYPA1.330e-13758.76Predicted protein n=3 Tax=Physcomitrium patens Tax... [more]
UPI001C4FE6A64.220e-13757.79sorbitol dehydrogenase-like n=4 Tax=Proteaceae Tax... [more]
D7TMY3_VITVI9.410e-13758.07PKS_ER domain-containing protein n=6 Tax=Vitis Tax... [more]
A0A328D298_9ASTE1.300e-13657.51PKS_ER domain-containing protein n=3 Tax=Cuscuta s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_156contigContig_156:301370..304294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353326|estExt_Genemark1.C_Ctg_1560037
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00085,RC00102
KEGG ReactionR00875,R01896
KEGG ModuleM00014
KEGG Pathwayko00040,ko00051,ko01100,map00040,map00051,map01100
KEGG koko:K00008,ko:K19635
EC1.1.1.14,1.1.1.366
GOsGO:0003674,GO:0003824,GO:0003939,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005911,GO:0008150,GO:0008152,GO:0009506,GO:0016491,GO:0016614,GO:0016616,GO:0030054,GO:0044424,GO:0044444,GO:0044464,GO:0055044,GO:0055114
DescriptionL-arabinose catabolic process
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1063@1|root,KOG0024@2759|Eukaryota
Evalue9.94e-162
Seed ortholog2880.D7FK11
Hectar predicted targeting categoryother localisation
TranscriptId353648
TrackFilteredModels1
ProteinId353326
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353326gene_14829Tribonema minus UTEX_B_3156 geneContig_156 301370..304294 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14829_1exon_14829_1Tribonema minus UTEX_B_3156 exonContig_156 301370..302428 +
exon_14829_2exon_14829_2Tribonema minus UTEX_B_3156 exonContig_156 304271..304294 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14829CDS_14829Tribonema minus UTEX_B_3156 CDSContig_156 301370..302428 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353326Trimin1|353326|estExt_Genemark1.C_Ctg_1560037Tribonema minus UTEX_B_3156 polypeptideContig_156 301370..304294 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14829 ID=mRNA_14829|Name=jgi.p|Trimin1|353326|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1083bp|location=Sequence derived from alignment at Contig_156:301370..304294+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGGGAAGGATAACATGGCAGCCTGGCTCTACGGAGTCGACGACCT
TCGCGTACAGCCACACCATCAGCGACTCGATCAGCCCCTGCAAGCCAACG
AGGTGCGCGTGCAGGTGGGTGCCCTGGGCATCTGCGGCAGCGATGTGCAC
TACCTGAAGCACATGCGCATAGGGGACTTCGTGGTCAATGAGCCCATGAT
CATTGGTCACGAGAGCGCGGGGATGATCACTGAAATCGGCCCTGGAGTCA
AGCATCTCAAGGTGGGCGACAGAGTAGCCATGGAACCCGGGATTCCCTGC
CGTTGCTGCCACCTCTGCAAGGAGGGCGTGTACAACCTTTGCGAAGAGAT
GGAGTTCTTCGCAACGCCTCCCGTGCACGGCTCTCTGGCCAACTTCGTCG
TCCACCCCGCCGACTTCTGCTTCCCTCTGCCGGACGGCATGACTCTCGAA
GAAGGCGCCATGTGCGAGCCCGTGTCGGTGGGCATACACGCGTGCAAGCG
GTCTGGGGTGAGGCCAGGGACGCTGCTTGCAGTGCTCGGCGCGGGTCCCA
TAGGACTGGTCACCCTGCTCGTCGCCAAGGCCTTCGGCGCCACCAGCATC
GTAATCACCGACATATCGGACGAGAGGCTGACTGTAGCTAAAGCCCTGGG
TGCCACGGCGTGCATCAATGTCGCCAACCTCACCACGGAAGAGACCTGCA
AGCGCATCACAGAGGCTCTCGGGGGGCGCAAACCTCACGTCACGGCGGAC
TGCTGCGGCTTCACATCCAGCATGGCTGCGGCGCTGGCGGTTACGGCGAG
CGGCGGCAAGGTGTGCCTCATAGGCATGGGGCACGGGGAAATGACGCTGC
CGCTTACGGCGTCGGCGGCGCGGGAGGTGGACATTCTGGGGGTGTTCCGG
TACCGCAACGCGTACCCGCTGGCGATCGATCTCATATCCAAGCGGCACAT
AGACGTGCAGCCGCTGATCACCAACCGCTTCAACCTGGTGGGGGGGTTCT
CGCAGGAGGTGATCAAGGAGGGGTTTGAGGTGTCGGCGAAGGGGCGCAAC
GCGATCAAGGCTGACGCCGGCAAGTCTGCCTAA
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protein sequence of jgi.p|Trimin1|353326

>Trimin1|353326|estExt_Genemark1.C_Ctg_1560037 ID=Trimin1|353326|estExt_Genemark1.C_Ctg_1560037|Name=jgi.p|Trimin1|353326|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=361bp
MAGKDNMAAWLYGVDDLRVQPHHQRLDQPLQANEVRVQVGALGICGSDVH
YLKHMRIGDFVVNEPMIIGHESAGMITEIGPGVKHLKVGDRVAMEPGIPC
RCCHLCKEGVYNLCEEMEFFATPPVHGSLANFVVHPADFCFPLPDGMTLE
EGAMCEPVSVGIHACKRSGVRPGTLLAVLGAGPIGLVTLLVAKAFGATSI
VITDISDERLTVAKALGATACINVANLTTEETCKRITEALGGRKPHVTAD
CCGFTSSMAAALAVTASGGKVCLIGMGHGEMTLPLTASAAREVDILGVFR
YRNAYPLAIDLISKRHIDVQPLITNRFNLVGGFSQEVIKEGFEVSAKGRN
AIKADAGKSA*
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mRNA from alignment at Contig_156:301370..304294+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14829 ID=mRNA_14829|Name=jgi.p|Trimin1|353326|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2925bp|location=Sequence derived from alignment at Contig_156:301370..304294+ (Tribonema minus UTEX_B_3156 )
ATGGCAGGGAAGGATAACATGGCAGCCTGGCTCTACGGAGTCGACGACCT TCGCGTACAGCCACACCATCAGCGACTCGATCAGCCCCTGCAAGCCAACG AGGTGCGCGTGCAGGTGGGTGCCCTGGGCATCTGCGGCAGCGATGTGCAC TACCTGAAGCACATGCGCATAGGGGACTTCGTGGTCAATGAGCCCATGAT CATTGGTCACGAGAGCGCGGGGATGATCACTGAAATCGGCCCTGGAGTCA AGCATCTCAAGGTGGGCGACAGAGTAGCCATGGAACCCGGGATTCCCTGC CGTTGCTGCCACCTCTGCAAGGAGGGCGTGTACAACCTTTGCGAAGAGAT GGAGTTCTTCGCAACGCCTCCCGTGCACGGCTCTCTGGCCAACTTCGTCG TCCACCCCGCCGACTTCTGCTTCCCTCTGCCGGACGGCATGACTCTCGAA GAAGGCGCCATGTGCGAGCCCGTGTCGGTGGGCATACACGCGTGCAAGCG GTCTGGGGTGAGGCCAGGGACGCTGCTTGCAGTGCTCGGCGCGGGTCCCA TAGGACTGGTCACCCTGCTCGTCGCCAAGGCCTTCGGCGCCACCAGCATC GTAATCACCGACATATCGGACGAGAGGCTGACTGTAGCTAAAGCCCTGGG TGCCACGGCGTGCATCAATGTCGCCAACCTCACCACGGAAGAGACCTGCA AGCGCATCACAGAGGCTCTCGGGGGGCGCAAACCTCACGTCACGGCGGAC TGCTGCGGCTTCACATCCAGCATGGCTGCGGCGCTGGCGGTTACGGCGAG CGGCGGCAAGGTGTGCCTCATAGGCATGGGGCACGGGGAAATGACGCTGC CGCTTACGGCGTCGGCGGCGCGGGAGGTGGACATTCTGGGGGTGTTCCGG TACCGCAACGCGTACCCGCTGGCGATCGATCTCATATCCAAGCGGCACAT AGACGTGCAGCCGCTGATCACCAACCGCTTCAACCTGGTGGGGGGGTTCT CGCAGGAGGTGATCAAGGAGGGGTTTGAGGTGTCGGCGAAGGGGCGCAAC GCGATCAAGGTGATGTTTCACTTGGTTGACAATGCTGCTAGTGCGTAATC ACTGCTGTTGCGGCAGCAGTAGCAGCACGTAGAATGCCCAGGTACAAGTG GGTGACAACGTTACGGCCCTTCGACACGTAGCGCAGCTTACAGACAGGGG ACTTGATGCAAGCTTGCCGTTTTGCTGCTGCCCACTCATCATGTAGTTCT TGCATGTTAATATTGGAATTAAAGAAAATGGGACCGAGCATAGTTATTAT ATCGCCTGCTCGTTCAAGTGTTGTGTACATTTGCTTCTGCTTGTGCCATA TTGTCTTGCAGAGGGTCGTGCCCTTTTCAGGTACATATCTGGGTTAGCCG TACTGCAACGGCGCCATTGAGATATTCTACAGGCGCATGCTCGCGCATGC ACTGTCTGCACTTGTATTGTGCAGAATCCCTGCGTCGCTTGTTAGGTTTA GGGTTCAGAGTCAGCTGACCCCCTAGATGCTCGCAACTTGATGTAGATCG GATGTTTCTGCCACGGAGCGGTTTATGGACACTGTGTACGCAATGCGTGC TGAATTTGTACATATCCCTCAACTCTGTTCAGTGATGTGGACTGTCATGT TGATGTACTGCATCTTGTGATGAGACAACAACGTTCAGTGGGTTTTGATA GCAATCCTGCATTATTGAGGCCAGTGACCGGGACACTAACTGGAGCATGC ATGGGAATCACTGCGCGCTGCATATGAACTTGGGTACCTACTTGATAAGA AAAAGGCATCAAACGTGCACAACCAGGCAAGTACTACTTCAAGAAGTATC TGCTGGGCCAAACCTTGATTGATGAGTGCTGAAAGACACATGATTATGCT GAGTTTCTGCTTCAAGCTCTGCTTAGCACCGCAGTCAGCTTCCATGTCTG TCAAGTGTGCTGTATGCATGTATGAAACCAGCTAGTGGCAGTAACATGAC CTCTGAACACTTCTCTAAGGCCAATCATGTTGGGGTTACTTAAAATACCT GTATTACGCAGTGTAGGCGCCTCGAGTCTGTGCGTATGGCGCACCTGCTT GCGTGTTGTACCCAGATGCTAGCATCTGATAACAAACTGGCGCCTATCCC AAAAATGGAGCTACTTCTTTAGAAGCCTAGAGCACTCCTTGCAAAGCCTT CATAGTGACGTGTACTTTGAAGCAATGCCCTGGGCACAGTGAAGCCTTGA TTGTCCAATGAGCTGCTGCCGGTTGCTGCTGTGTGCAGACCACATACACC TTCTGCAGCAAGCCTATCCTATGCATCAATTCGGAACCTGAAAGCCGGCA TTGTGGCGGTGACTGAACTGTCTCTCTCAGCAGCGACAAACAAGCTTGCA AAGGTGGCATGCTGAGCAGCATGTTCTACTGTATACTCAAGGTGGTTGAC TACGAAACATTGACGACACATGCTGAGAAACGAAAAACTGTAGAAGACAA AAGGTACCTTTTGTGCTGTACTATCAACTTCCTGGCGCAGTATGACGTGC ATCACGATGCACAACATAACCTAAGCGGTAAGTGGCATTGCTGCCTTAGA TGTGGAAGTCTAACATATGCGTGAGGCAGGATGGCAGGCACTTGCAGATA TCATGCTGTGCAGGTAACCAGGGTTAGCTGAAAGCCCGATGCAACAGAAG CCAGCAGCAGCAGCACCACCACAAGCATCAGCAGCAGCAGCAGCACTAGC CGAAGTAATCTGCCACCTACCAGCAGCCGCACAAGCATCGTCCGTGCAGC ACATGCAATGTACAAGTGTCTGCTGATGCATCCATCGATCAATGTTGCAC TTGTGCTGTGTGTATTTTGTTCTGTTGCGCCCCTCCTCTAGCGTTTGGCA GGCTGACGCCGGCAAGTCTGCCTAA
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Coding sequence (CDS) from alignment at Contig_156:301370..304294+

>mRNA_14829 ID=mRNA_14829|Name=jgi.p|Trimin1|353326|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1083bp|location=Sequence derived from alignment at Contig_156:301370..304294+ (Tribonema minus UTEX_B_3156 )
ATGGCAGGGAAGGATAACATGGCAGCCTGGCTCTACGGAGTCGACGACCT
TCGCGTACAGCCACACCATCAGCGACTCGATCAGCCCCTGCAAGCCAACG
AGGTGCGCGTGCAGGTGGGTGCCCTGGGCATCTGCGGCAGCGATGTGCAC
TACCTGAAGCACATGCGCATAGGGGACTTCGTGGTCAATGAGCCCATGAT
CATTGGTCACGAGAGCGCGGGGATGATCACTGAAATCGGCCCTGGAGTCA
AGCATCTCAAGGTGGGCGACAGAGTAGCCATGGAACCCGGGATTCCCTGC
CGTTGCTGCCACCTCTGCAAGGAGGGCGTGTACAACCTTTGCGAAGAGAT
GGAGTTCTTCGCAACGCCTCCCGTGCACGGCTCTCTGGCCAACTTCGTCG
TCCACCCCGCCGACTTCTGCTTCCCTCTGCCGGACGGCATGACTCTCGAA
GAAGGCGCCATGTGCGAGCCCGTGTCGGTGGGCATACACGCGTGCAAGCG
GTCTGGGGTGAGGCCAGGGACGCTGCTTGCAGTGCTCGGCGCGGGTCCCA
TAGGACTGGTCACCCTGCTCGTCGCCAAGGCCTTCGGCGCCACCAGCATC
GTAATCACCGACATATCGGACGAGAGGCTGACTGTAGCTAAAGCCCTGGG
TGCCACGGCGTGCATCAATGTCGCCAACCTCACCACGGAAGAGACCTGCA
AGCGCATCACAGAGGCTCTCGGGGGGCGCAAACCTCACGTCACGGCGGAC
TGCTGCGGCTTCACATCCAGCATGGCTGCGGCGCTGGCGGTTACGGCGAG
CGGCGGCAAGGTGTGCCTCATAGGCATGGGGCACGGGGAAATGACGCTGC
CGCTTACGGCGTCGGCGGCGCGGGAGGTGGACATTCTGGGGGTGTTCCGG
TACCGCAACGCGTACCCGCTGGCGATCGATCTCATATCCAAGCGGCACAT
AGACGTGCAGCCGCTGATCACCAACCGCTTCAACCTGGTGGGGGGGTTCT
CGCAGGAGGTGATCAAGGAGGGGTTTGAGGTGTCGGCGAAGGGGCGCAAC
GCGATCAAGGCTGACGCCGGCAAGTCTGCCTAA
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