Trimin1|353320|estExt_Genemark1.C_Ctg_1560029 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353320
Unique NameTrimin1|353320|estExt_Genemark1.C_Ctg_1560029
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length480
Homology
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A835Z8V9_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V9_9STRA)

HSP 1 Score: 734 bits (1894), Expect = 9.910e-264
Identity = 479/479 (100.00%), Postives = 479/479 (100.00%), Query Frame = 0
Query:    1 MACGYGVEQMVHALLKAGADPNTTNCYTWTPLLEACXXXXXXXXXXXXXXXXXVSHIPSEGASNSAQFLRGPPQTXXXXXXXXXXXXXXXXXXXXXXXKDTTNAIGWTPLHEXXXXXXXXXXXXXACFYSSPFVVVVVTLLLEHACFYSHVDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVTLPTLVFAVDEETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGXXXXXXXXXXXXXATASERGSAAHRLLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESWVQAHTPSTTAPAAETKSCATQQAPAAPGATSATLTDKRGLGATSKPLAATAPVSPLAAKGTVDEDDGLYEF 479
            MACGYGVEQMVHALLKAGADPNTTNCYTWTPLLEACXXXXXXXXXXXXXXXXXVSHIPSEGASNSAQFLRGPPQTXXXXXXXXXXXXXXXXXXXXXXXKDTTNAIGWTPLHEXXXXXXXXXXXXXACFYSSPFVVVVVTLLLEHACFYSHVDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVTLPTLVFAVDEETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGXXXXXXXXXXXXXATASERGSAAHRLLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESWVQAHTPSTTAPAAETKSCATQQAPAAPGATSATLTDKRGLGATSKPLAATAPVSPLAAKGTVDEDDGLYEF
Sbjct:    1 MACGYGVEQMVHALLKAGADPNTTNCYTWTPLLEACXXXXXXXXXXXXXXXXXVSHIPSEGASNSAQFLRGPPQTXXXXXXXXXXXXXXXXXXXXXXXKDTTNAIGWTPLHEXXXXXXXXXXXXXACFYSSPFVVVVVTLLLEHACFYSHVDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVTLPTLVFAVDEETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGXXXXXXXXXXXXXATASERGSAAHRLLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESWVQAHTPSTTAPAAETKSCATQQAPAAPGATSATLTDKRGLGATSKPLAATAPVSPLAAKGTVDEDDGLYEF 479          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A7S3ZT12_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT12_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.280e-41
Identity = 134/445 (30.11%), Postives = 177/445 (39.78%), Query Frame = 0
Query:    1 MACGYGVEQMVHALLKAGADPNTTNCYTWTPLLEACXXXXXXXXXXXXXXXXXVSHIPSEGASNSAQFLRGPPQTXXXXXXXXXXXXXXXXXXXXXXXKDTTNAIGWTPLHEXXXXXXXXXXXXXACFYSSPFVVVVVTLLLEHACFYSHVDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVTLPT-LVFAVDEETGQMFIGLQT-PKSAENGAGD----VPTSSE----KKGSPKGGRGXXXXXXXXXXXXXATA--SERGSAAHR-------------------------LLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            MA  YGVE +V ALL+AGAD NT N   WTPLLEAC                 + HIP   AS +    + PPQ+                       KD  N +GWTPLHE                                A FY+HVDV   LL +GA+AT+ +++GA+PFH+ + P++RD ++ +  P A  +   P  L F      G  F   +  P  AE+   D    V T  E    KKG   G RG                    +G A  R                          LH G MLG LPSL         P+ +  ++ H                   X      A        D P  F C +S+R+MR+P+R+PYG+V +  +I  W  + GS+ PLTGQPL  A+LK D EL+  I  W
Sbjct:  147 MAAAYGVEPLVEALLEAGADVNTKNDQGWTPLLEACHRGFDGIVRKLLTGNKTLDHIPDVEASKAFPLAKPPPQSALGEASRCGFEDIVKVLLEAGSDKDLVNHLGWTPLHE--------------------------------AAFYNHVDVARTLLVYGANATKKDARGAVPFHVASLPSVRDVLKELGGPDACPERDCPPGLAFQFGALLGNDFSDDEVQPLVAESKDEDEGFPVGTPVELVGLKKGELNGRRGKIIETPSSVPAGRVAVLLDGKGIAVKRENLVDVTNKPINQVARAVDLPEEPQFLHKGAMLGELPSL--------TPQRSHDREEHRRLSEGASSAERRRIAPNYXXXXXXPATPQQQWDADTPAEFACAISKRMMREPMRSPYGHVVEAKVIQAWFAKNGSVCPLTGQPLSAAQLKPDKELRQKITQW 551          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: D8LGQ2_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ2_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.450e-35
Identity = 118/340 (34.71%), Postives = 166/340 (48.82%), Query Frame = 0
Query:   99 KDTTNAIGWTPLHEXXXXXXXXXXXXXACFYSSPFVVVVVTLLLEHACFYSHVDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVTLPTLVFAVDEETGQMFIGLQTPKSAENGAGDVP--------------TSSEKKGSPKGGRGXXXXXXXXXXXXXATASERGSAAHRLLHSGTMLGNLPSL------ATTGEAPPVPEVAEA---KKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAV-------DAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            KD  N +GWTPLHE                                AC+++H+D V LLL HGAD T  N QGA+P++MT+   IRD ++ +    A   +  PT    V+E+ GQMF+ +   ++ +                     +S  +  SP+G  G               +   G     +LH G MLG LP+L      +++G A P    ++    ++ H        XXXXXXXXXXXX G    +R + +L +        AP    C LS+R+ RDPVRTPYG+++DR MI +WL +QGSI PLTGQPLVEAELK DG+ K+  ++W
Sbjct:    9 KDQPNGMGWTPLHE--------------------------------ACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQ-GQMFVRVTAGEADKEXXXXXXXXXXXXXXXXXXXASSPSRSRSPQGRAG---------------SXXXGPEGGEVLHKGPMLGELPALGRPPVSSSSGGASPTAYDSKRDSEERRHDGAGVGGRXXXXXXXXXXXXPGMHEASRDSNSLGMPGETDEGQAPEGIICQLSKRVARDPVRTPYGHLFDRQMIGLWLSKQGSICPLTGQPLVEAELKADGKAKAEAKAW 300          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A6H5JAZ1_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ1_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.060e-19
Identity = 106/260 (40.77%), Postives = 142/260 (54.62%), Query Frame = 0
Query:  173 LPFHMTTAPAIRDAIQAMAPPAAVSDVTLPTLVFAVDEETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGXXXXXXXXXXXXXATASER-------GSAAHRLLHSGTMLGNLPSL------ATTGEAPPVP----EVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAV-------DAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            +P++MT+   IRD ++ +    A   +  PT    V+E+ GQMF+ +         AG+     EK G       XXXXXXXXXXXXX             G     +LH G MLG LP+L      +++G A P        +E ++        XXXXXXXXXXXXXX G    +R + +L +        AP    C LS+R+ RDPVRTPYG+++DR MI +WL +QGSI PLTGQPLVEAELK DG+ K+  ++W
Sbjct:    1 MPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQ-GQMFVRVT--------AGEADNEEEKAGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDGGEVLHKGPMLGELPALGRPPVSSSSGGASPTAYDSKRDSEERRHDGAGVGGXXXXXXXXXXXXXXPGMHEVSRDSNSLGMPGETDEEQAPEGIICQLSKRVARDPVRTPYGHLFDRQMIRLWLSKQGSICPLTGQPLVEAELKADGKAKAEAKAW 251          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A7S2WT85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT85_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.640e-17
Identity = 63/199 (31.66%), Postives = 93/199 (46.73%), Query Frame = 0
Query:  210 EETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGXXXXXXXXXXXXXATASERGSAAHRLLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            +  G   + L+ P  +E  A   PT+   + +PK  RG                   G A   LLHSG +LG+LPSL       P  + A A ++                       ++V  R       D P  F CN++++ + DPV TPYG+VY+R++I  W+ + GSIDP+TGQPL ++ELK D +L   +E W
Sbjct:  331 DAAGGAHLALEGPGPSEPAARPSPTTPNTRSAPKPSRGSPGD---------------GGAKDELLHSGRLLGDLPSLT------PPHQPANALRNSFDEGRPQFREQGGARPAQSSPIANVNPR-------DVPREFLCNITKKPLGDPVATPYGHVYERSVILQWIDRNGSIDPMTGQPLSKSELKPDQDLLRRMEKW 501          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A2R5G6V1_9STRA (Ankyrin repeat domain-containing protein 27 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6V1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.290e-16
Identity = 100/410 (24.39%), Postives = 144/410 (35.12%), Query Frame = 0
Query:    1 MACGYGVEQMVHALLKAGADPNTTNCYTWTPLLEACXXXXXXXXXXXXXXXXXVSHIPSEGASNSAQFLRGPPQTXXXXXXXXXXXXXXXXXXXXXXXKDTTNAIGWTPLHEXXXXXXXXXXXXXACFYSSPFVVVVVTLLLEHACFYSHVDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVTLPTLVFAVDEETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGXXXXXXXXXXXXXATASERGSAAHRLLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVD--APPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            MAC YG+  +V ALL AGAD  TTN   W PL EA                     I    AS  A +    P                          D  N  GWT LHE                                A F+ H   V  L+ H  +      QG    H  +APAIR+                  L+  +D+   + +     P   E+      T   K+ +P+                   ASE   A+HR  +   +LG+LP          VP VA A+ + +                      +  ART  A   +   P  + C L+ +L+ DPV T YGN ++++ +  W++ QG++ P+TGQPL E+E+  D +L+  I  W
Sbjct:  203 MACAYGLTPVVSALLAAGADVETTNSIGWKPLYEAVHRGYTDIARLLLKATATPDEIIP--ASLIAPYHAQYPLAHACRQNHPEVVTVLLEAGGAHV--DAQNEGGWTALHE--------------------------------AVFFRHEACVRTLIDHNCNLLIKTKQGYTALHFESAPAIRE-----------------LLLSKLDDADREKY-ARPGPPEPEDATTTRDTIESKRAAPESKT--CDSDGSNNKNDNNNASELDGASHRPEYR--LLGDLPDFKANSFMQTVPNVAAAEDNETGKEAARRRIAERKRLRAERKKRTKGARTQGAAPPEQGVPEEYACQLTGKLLVDPVTTMYGNHFEKSALQAWIKSQGNLCPITGQPLSESEMVIDTDLRIEISDW 554          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A7S4DAJ1_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAJ1_HETAK)

HSP 1 Score: 75.1 bits (183), Expect = 2.830e-12
Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0
Query:  335 AAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            AAA     P  F C ++  LM++PV++P G+V++++ I +WL+ QGS+ P+TGQPLV+ +L+ D ELK+ I  W
Sbjct:   65 AAAADPSIPREFTCAINGHLMKEPVKSPGGHVFEKSTITLWLRMQGSVCPITGQPLVQEDLEPDEELKTRIMRW 138          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A812SFG3_SYMMI (PUB12 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFG3_SYMMI)

HSP 1 Score: 77.8 bits (190), Expect = 3.070e-12
Identity = 62/137 (45.26%), Postives = 80/137 (58.39%), Query Frame = 0
Query:  273 LLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESWV 409
            LLHSG +LGNLP+L+                 H      XXXXXXXXXXXXXX   S+++    A A D PP F C L ++ M DPV++ YGNV++R++I  WL+ QG I PLTG PL E +L    +LK  I  W+
Sbjct:  123 LLHSGPVLGNLPALSP----------------HKPISTTXXXXXXXXXXXXXXXXLSMQS----AAASDVPPEFVCELCQKQMSDPVKSTYGNVFERSVIENWLKTQGHICPLTGAPLGETDLSPLDDLKVRIRKWI 239          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A8K1C971_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C971_PYTOL)

HSP 1 Score: 79.7 bits (195), Expect = 3.250e-12
Identity = 77/270 (28.52%), Postives = 125/270 (46.30%), Query Frame = 0
Query:  142 LEHACFYSHVDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVTLPTLVFAVDEETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGXXXXXXXXXXXXXATASERGSAAHRLLHSGTMLGNLPSLATTGEAPPVPEVAEAKKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAV---DAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            +  A +++ V VV LL+ +GAD      +G+L   +T +  IR  ++         D+T   L  A  +         +   + ++G+GDV   +EK  SPK                    S   +         T+LG+LP+L     AP +     A K        XXXXXXXXX     T S+ + +          + PP +KC ++ +L++DP+R+PYG V++R ++  W +  G+  PLTGQPL  AE+  D +L++ I +W
Sbjct:  275 MHEAAYHNRVGVVKLLIVYGADVLIKTKKGSLARDVTISSEIRGMLE---------DITTAALAAASPK---------REKTAIQDGSGDV--EAEKPSSPK-------------------KSPAKTVPLSRKEEYTLLGDLPNLEARSAAPTI-----AIKDADDAADDXXXXXXXXXVAEPSTASTTKHKKKXXXKKHGREVPPEYKCAVTLKLLKDPLRSPYGQVFEREVLEAWFRDFGNRCPLTGQPLSMAEIIPDDKLRAEIRNW 500          
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Match: A0A7S2D1M3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1M3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.500e-10
Identity = 46/150 (30.67%), Postives = 71/150 (47.33%), Query Frame = 0
Query:  273 LLHSGTMLGNLPSLAT----------TGEAPPVPEVAEA----KKSHSXXXXXXXXXXXXXXXXXXXTGSSVEARTAAALAVDAPPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
            +LH G MLG+LPSL+           TG  P +    ++    + S                      G   +   A  +  + P  F C +S+R ++DPVR+PYGNV++RA+   W+ + GSI P+TGQPL   E+    ++  A+E W
Sbjct:  179 MLHRGGMLGDLPSLSAHRVSPNSDSLTGIGPGLQAHTQSSMGKRLSFGGIEAQAAPKSGEKSRRRKSKGGGRKGSVAVGVPANYPQEFLCEISQRPLQDPVRSPYGNVFERAIFKTWVNRNGSICPITGQPLGLNEVVAAEDVVEAMEKW 328          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353320 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8V9_9STRA9.910e-264100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A7S3ZT12_9STRA1.280e-4130.11Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D8LGQ2_ECTSI3.450e-3534.71U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JAZ1_9PHAE2.060e-1940.77U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2WT85_9STRA3.640e-1731.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5G6V1_9STRA1.290e-1624.39Ankyrin repeat domain-containing protein 27 n=1 Ta... [more]
A0A7S4DAJ1_HETAK2.830e-1244.59Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A812SFG3_SYMMI3.070e-1245.26PUB12 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A8K1C971_PYTOL3.250e-1228.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2D1M3_9STRA1.500e-1030.67Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U-box domainSMARTSM00504Ubox_2coord: 345..408
e-value: 7.1E-17
score: 72.1
IPR003613U-box domainPFAMPF04564U-boxcoord: 342..412
e-value: 2.2E-18
score: 66.2
IPR003613U-box domainPROSITEPS51698U_BOXcoord: 341..415
score: 16.198242
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 118..166
e-value: 76.0
score: 12.2
coord: 72..101
e-value: 130.0
score: 11.4
coord: 27..56
e-value: 2.3
score: 17.2
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 1..48
e-value: 4.1E-5
score: 24.1
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 119..168
e-value: 0.0055
score: 17.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 72..104
score: 9.91158
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 340..415
e-value: 7.3E-21
score: 75.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..194
e-value: 2.4E-35
score: 123.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..332
NoneNo IPR availablePANTHERPTHR24126ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATEDcoord: 74..303
coord: 2..126
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 72..103
score: 8.720098
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 333..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_156contigContig_156:237152..245992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353320mRNA_14819Tribonema minus UTEX_B_3156 mRNAContig_156 237129..245992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353320|estExt_Genemark1.C_Ctg_1560029 ID=Trimin1|353320|estExt_Genemark1.C_Ctg_1560029|Name=jgi.p|Trimin1|353320|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=480bp
MACGYGVEQMVHALLKAGADPNTTNCYTWTPLLEACHKGFEGIALALLKA
GADVSHIPSEGASNSAQFLRGPPQTPLGEAARAGHVGICRALLSSGADKD
TTNAIGWTPLHEDAANATGWTLLHEACFYSSPFVVVVVTLLLEHACFYSH
VDVVTLLLTHGADATRPNSQGALPFHMTTAPAIRDAIQAMAPPAAVSDVT
LPTLVFAVDEETGQMFIGLQTPKSAENGAGDVPTSSEKKGSPKGGRGGHG
SRGGGGGGGGATASERGSAAHRLLHSGTMLGNLPSLATTGEAPPVPEVAE
AKKSHSSSSNSAQHHSTAQQQRRSSTGSSVEARTAAALAVDAPPNFKCNL
SRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGE
LKSAIESWVQAHTPSTTAPAAETKSCATQQAPAAPGATSATLTDKRGLGA
TSKPLAATAPVSPLAAKGTVDEDDGLYEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR002110Ankyrin_rpt
IPR013083Znf_RING/FYVE/PHD
IPR036770Ankyrin_rpt-contain_sf